RNA–Protein interactions for RNA: ENST00000588260.1

AC003043.1-201, humanhuman

TSL 3 BASIC

Gene AC003043.1, Length 337 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003043.1-201ENST00000588260 SIK1P57059 783 aa18.42■□□□□ 0.54
AC003043.1-201ENST00000588260 NFATC2IPQ8NCF5 419 aa18.42■□□□□ 0.54
AC003043.1-201ENST00000588260 SPON1Q9HCB6 807 aa18.42■□□□□ 0.54
AC003043.1-201ENST00000588260 ATG3Q9NT62 314 aa18.42■□□□□ 0.54
AC003043.1-201ENST00000588260 QSER1Q2KHR3 1735 aa18.42■□□□□ 0.54
AC003043.1-201ENST00000588260 MAP3K5Q99683 1374 aa18.42■□□□□ 0.54
AC003043.1-201ENST00000588260 GNAT3A8MTJ3 354 aa18.41■□□□□ 0.54
AC003043.1-201ENST00000588260 RNMTO43148 476 aaKnown RBP18.41■□□□□ 0.54
AC003043.1-201ENST00000588260 PHACTR3Q96KR7 559 aa18.4■□□□□ 0.54
AC003043.1-201ENST00000588260 RBM42Q9BTD8 480 aaKnown RBP18.4■□□□□ 0.54
AC003043.1-201ENST00000588260 SLC52A2Q9HAB3 445 aa18.4■□□□□ 0.54
AC003043.1-201ENST00000588260 LGR6Q9HBX8 967 aa18.4■□□□□ 0.54
AC003043.1-201ENST00000588260 TUBGCP6Q96RT7 1819 aa18.39■□□□□ 0.54
AC003043.1-201ENST00000588260 ADAMTS7Q9UKP4 1686 aa18.39■□□□□ 0.53
AC003043.1-201ENST00000588260 ZBTB7AO95365 584 aa18.39■□□□□ 0.53
AC003043.1-201ENST00000588260 ATP6V1AP38606 617 aa18.39■□□□□ 0.53
AC003043.1-201ENST00000588260 PDGFDQ9GZP0 370 aaPredicted RBP18.39■□□□□ 0.53
AC003043.1-201ENST00000588260 PNNQ9H307 717 aaKnown RBP18.39■□□□□ 0.53
AC003043.1-201ENST00000588260 C4BP0C0L5 1744 aa18.39■□□□□ 0.53
AC003043.1-201ENST00000588260 MRC1P22897 1456 aa18.39■□□□□ 0.53
AC003043.1-201ENST00000588260 AK7Q96M32 723 aa18.38■□□□□ 0.53
AC003043.1-201ENST00000588260 PRKRIP1Q9H875 184 aaPredicted RBP18.38■□□□□ 0.53
AC003043.1-201ENST00000588260 TEFQ10587 303 aa18.37■□□□□ 0.53
AC003043.1-201ENST00000588260 MTFR1LQ9H019 292 aa18.37■□□□□ 0.53
AC003043.1-201ENST00000588260 PPP1R1BQ9UD71 204 aaPredicted RBP18.37■□□□□ 0.53
AC003043.1-201ENST00000588260 PNPLA7Q6ZV29 1317 aa18.37■□□□□ 0.53
AC003043.1-201ENST00000588260 ZNF831Q5JPB2 1677 aa18.37■□□□□ 0.53
AC003043.1-201ENST00000588260 PTCD1O75127 700 aaKnown RBP18.36■□□□□ 0.53
AC003043.1-201ENST00000588260 RTF1Q92541 710 aaKnown RBP18.36■□□□□ 0.53
AC003043.1-201ENST00000588260 SRCAPQ6ZRS2 3230 aa18.35■□□□□ 0.53
AC003043.1-201ENST00000588260 MAPK8IP3Q9UPT6 1336 aa18.35■□□□□ 0.53
AC003043.1-201ENST00000588260 FLAD1Q8NFF5 587 aa18.35■□□□□ 0.53
AC003043.1-201ENST00000588260 SLC16A10Q8TF71 515 aa18.35■□□□□ 0.53
AC003043.1-201ENST00000588260 ATF5Q9Y2D1 282 aaPredicted RBP18.35■□□□□ 0.53
AC003043.1-201ENST00000588260 ITPK1Q13572 414 aa18.34■□□□□ 0.53
AC003043.1-201ENST00000588260 LINC00116Q8NCU8 138 aa18.34■□□□□ 0.53
AC003043.1-201ENST00000588260 WDR43Q15061 677 aaKnown RBP eCLIP18.33■□□□□ 0.52
AC003043.1-201ENST00000588260 IL17REQ8NFR9 667 aa18.33■□□□□ 0.52
AC003043.1-201ENST00000588260 TTC5Q8N0Z6 440 aa18.32■□□□□ 0.52
AC003043.1-201ENST00000588260 UBR3Q6ZT12 1888 aa18.32■□□□□ 0.52
AC003043.1-201ENST00000588260 COL5A3P25940 1745 aaPredicted RBP18.32■□□□□ 0.52
AC003043.1-201ENST00000588260 GNPATO15228 680 aa18.31■□□□□ 0.52
AC003043.1-201ENST00000588260 SLC39A6Q13433 755 aa18.31■□□□□ 0.52
AC003043.1-201ENST00000588260 COL23A1Q86Y22 540 aaPredicted RBP18.31■□□□□ 0.52
AC003043.1-201ENST00000588260 SLC4A9Q96Q91 983 aa18.31■□□□□ 0.52
AC003043.1-201ENST00000588260 SIPA1L3O60292 1781 aaPredicted RBP18.31■□□□□ 0.52
AC003043.1-201ENST00000588260 CEMIPQ8WUJ3 1361 aa18.3■□□□□ 0.52
AC003043.1-201ENST00000588260 HTATSF1O43719 755 aaKnown RBP18.3■□□□□ 0.52
AC003043.1-201ENST00000588260 PHF14O94880 888 aa18.3■□□□□ 0.52
AC003043.1-201ENST00000588260 PLEKHF1Q96S99 279 aa18.3■□□□□ 0.52
AC003043.1-201ENST00000588260 SSFA2P28290 1259 aa18.29■□□□□ 0.52
AC003043.1-201ENST00000588260 POLD1P28340 1107 aa18.29■□□□□ 0.52
AC003043.1-201ENST00000588260 MCM10Q7L590 875 aa18.29■□□□□ 0.52
AC003043.1-201ENST00000588260 CICQ96RK0 1608 aaPredicted RBP18.29■□□□□ 0.52
AC003043.1-201ENST00000588260 DLG5Q8TDM6 1919 aa18.29■□□□□ 0.52
AC003043.1-201ENST00000588260 TJP1Q07157 1748 aa18.29■□□□□ 0.52
AC003043.1-201ENST00000588260 CNTNAP4Q9C0A0 1308 aa18.28■□□□□ 0.52
AC003043.1-201ENST00000588260 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.28■□□□□ 0.52
AC003043.1-201ENST00000588260 PTGER2P43116 358 aa18.28■□□□□ 0.52
AC003043.1-201ENST00000588260 NFE2L2Q16236 605 aa18.28■□□□□ 0.52
AC003043.1-201ENST00000588260 RC3H1Q5TC82 1133 aaKnown RBP18.28■□□□□ 0.52
AC003043.1-201ENST00000588260 KCPQ6ZWJ8 1503 aa18.28■□□□□ 0.52
AC003043.1-201ENST00000588260 UBR2Q8IWV8 1755 aa18.27■□□□□ 0.52
AC003043.1-201ENST00000588260 BTBD11A6QL63 1104 aa18.27■□□□□ 0.52
AC003043.1-201ENST00000588260 ANP32CO43423 234 aa18.27■□□□□ 0.52
AC003043.1-201ENST00000588260 RTCBQ9Y3I0 505 aaKnown RBP18.27■□□□□ 0.52
AC003043.1-201ENST00000588260 ZNF790Q6PG37 636 aa18.26■□□□□ 0.51
AC003043.1-201ENST00000588260 CRKLP46109 303 aaKnown RBP18.25■□□□□ 0.51
AC003043.1-201ENST00000588260 DCTN1Q14203 1278 aa18.25■□□□□ 0.51
AC003043.1-201ENST00000588260 DNAJC10Q8IXB1 793 aa18.25■□□□□ 0.51
AC003043.1-201ENST00000588260 VSIG10Q8N0Z9 540 aa18.25■□□□□ 0.51
AC003043.1-201ENST00000588260 ARXQ96QS3 562 aa18.25■□□□□ 0.51
AC003043.1-201ENST00000588260 SGIP1Q9BQI5 828 aa18.25■□□□□ 0.51
AC003043.1-201ENST00000588260 COL24A1Q17RW2 1714 aa18.24■□□□□ 0.51
AC003043.1-201ENST00000588260 RPS6KA4O75676 772 aa18.24■□□□□ 0.51
AC003043.1-201ENST00000588260 TRAPPC3LQ5T215 181 aa18.24■□□□□ 0.51
AC003043.1-201ENST00000588260 MSL1Q68DK7 614 aa18.24■□□□□ 0.51
AC003043.1-201ENST00000588260 SMIM5Q71RC9 77 aa18.24■□□□□ 0.51
AC003043.1-201ENST00000588260 AMIGO3Q86WK7 504 aa18.24■□□□□ 0.51
AC003043.1-201ENST00000588260 MYH14Q7Z406 1995 aaKnown RBP18.23■□□□□ 0.51
AC003043.1-201ENST00000588260 CCDC146Q8IYE0 955 aa18.23■□□□□ 0.51
AC003043.1-201ENST00000588260 FMNL2Q96PY5 1086 aa18.23■□□□□ 0.51
AC003043.1-201ENST00000588260 LMOD3Q0VAK6 560 aa18.22■□□□□ 0.51
AC003043.1-201ENST00000588260 RUNDC1Q96C34 613 aa18.22■□□□□ 0.51
AC003043.1-201ENST00000588260 ZNF496Q96IT1 587 aaPredicted RBP18.22■□□□□ 0.51
AC003043.1-201ENST00000588260 CCDC87Q9NVE4 849 aa18.22■□□□□ 0.51
AC003043.1-201ENST00000588260 ADAMTS8Q9UP79 889 aa18.22■□□□□ 0.51
AC003043.1-201ENST00000588260 HEG1Q9ULI3 1381 aa18.21■□□□□ 0.51
AC003043.1-201ENST00000588260 STARD3NLO95772 234 aa18.21■□□□□ 0.51
AC003043.1-201ENST00000588260 RFC4P35249 363 aa18.21■□□□□ 0.51
AC003043.1-201ENST00000588260 RIPK4P57078 832 aa18.21■□□□□ 0.51
AC003043.1-201ENST00000588260 TAF7Q15545 349 aaPredicted RBP18.21■□□□□ 0.51
AC003043.1-201ENST00000588260 TEX13AQ9BXU3 409 aaPredicted RBP18.21■□□□□ 0.51
AC003043.1-201ENST00000588260 CYP19A1P11511 503 aaPredicted RBP18.2■□□□□ 0.5
AC003043.1-201ENST00000588260 TMPOP42166 694 aaKnown RBP18.2■□□□□ 0.5
AC003043.1-201ENST00000588260 PNISRQ8TF01 805 aaKnown RBP18.2■□□□□ 0.5
AC003043.1-201ENST00000588260 INTS5Q6P9B9 1019 aaKnown RBP18.19■□□□□ 0.5
AC003043.1-201ENST00000588260 KLHL34Q8N239 644 aa18.19■□□□□ 0.5
AC003043.1-201ENST00000588260 ARHGEF1Q92888 912 aaKnown RBP18.19■□□□□ 0.5
AC003043.1-201ENST00000588260 FHDC1Q9C0D6 1143 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms