RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 LGR6Q9HBX8 967 aa27.01■■□□□ 1.91
TRAPPC6A-203ENST00000587818 QSER1Q2KHR3 1735 aa27.01■■□□□ 1.91
TRAPPC6A-203ENST00000587818 PPP2R1AP30153 589 aa27■■□□□ 1.91
TRAPPC6A-203ENST00000587818 MTHFSDQ2M296 383 aaKnown RBP27■■□□□ 1.91
TRAPPC6A-203ENST00000587818 AK7Q96M32 723 aa26.99■■□□□ 1.91
TRAPPC6A-203ENST00000587818 SLC4A9Q96Q91 983 aa26.99■■□□□ 1.91
TRAPPC6A-203ENST00000587818 COL3A1P02461 1466 aaPredicted RBP26.99■■□□□ 1.91
TRAPPC6A-203ENST00000587818 AKAP4Q5JQC9 854 aa26.98■■□□□ 1.91
TRAPPC6A-203ENST00000587818 MSL1Q68DK7 614 aa26.98■■□□□ 1.91
TRAPPC6A-203ENST00000587818 SYT17Q9BSW7 474 aa26.98■■□□□ 1.91
TRAPPC6A-203ENST00000587818 PHF14O94880 888 aa26.97■■□□□ 1.91
TRAPPC6A-203ENST00000587818 C4BP0C0L5 1744 aa26.96■■□□□ 1.91
TRAPPC6A-203ENST00000587818 HMGB2P26583 209 aaKnown RBP26.95■■□□□ 1.9
TRAPPC6A-203ENST00000587818 POLD1P28340 1107 aa26.95■■□□□ 1.9
TRAPPC6A-203ENST00000587818 KLHL34Q8N239 644 aa26.95■■□□□ 1.9
TRAPPC6A-203ENST00000587818 CFAP53Q96M91 514 aa26.95■■□□□ 1.9
TRAPPC6A-203ENST00000587818 RNMTO43148 476 aaKnown RBP26.94■■□□□ 1.9
TRAPPC6A-203ENST00000587818 PTCD1O75127 700 aaKnown RBP26.94■■□□□ 1.9
TRAPPC6A-203ENST00000587818 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.92■■□□□ 1.9
TRAPPC6A-203ENST00000587818 FLAD1Q8NFF5 587 aa26.92■■□□□ 1.9
TRAPPC6A-203ENST00000587818 GNPATO15228 680 aa26.91■■□□□ 1.9
TRAPPC6A-203ENST00000587818 SCN11AQ9UI33 1791 aa26.91■■□□□ 1.9
TRAPPC6A-203ENST00000587818 DCAF8L1A6NGE4 600 aa26.89■■□□□ 1.9
TRAPPC6A-203ENST00000587818 SLC52A2Q9HAB3 445 aa26.89■■□□□ 1.9
TRAPPC6A-203ENST00000587818 UBR3Q6ZT12 1888 aa26.88■■□□□ 1.89
TRAPPC6A-203ENST00000587818 DDX10Q13206 875 aaKnown RBP26.88■■□□□ 1.89
TRAPPC6A-203ENST00000587818 SLC39A6Q13433 755 aa26.88■■□□□ 1.89
TRAPPC6A-203ENST00000587818 PHACTR3Q96KR7 559 aa26.88■■□□□ 1.89
TRAPPC6A-203ENST00000587818 NUDCQ9Y266 331 aa26.88■■□□□ 1.89
TRAPPC6A-203ENST00000587818 U2AF1L5P0DN76 240 aaPredicted RBP26.87■■□□□ 1.89
TRAPPC6A-203ENST00000587818 PRKAR2BP31323 418 aa26.87■■□□□ 1.89
TRAPPC6A-203ENST00000587818 U2AF1Q01081 240 aaKnown RBP eCLIP26.87■■□□□ 1.89
TRAPPC6A-203ENST00000587818 COL24A1Q17RW2 1714 aa26.87■■□□□ 1.89
TRAPPC6A-203ENST00000587818 SSFA2P28290 1259 aa26.85■■□□□ 1.89
TRAPPC6A-203ENST00000587818 RSPH6AQ9H0K4 717 aa26.85■■□□□ 1.89
TRAPPC6A-203ENST00000587818 VIRMAQ69YN4 1812 aaKnown RBP26.84■■□□□ 1.89
TRAPPC6A-203ENST00000587818 IL17REQ8NFR9 667 aa26.84■■□□□ 1.89
TRAPPC6A-203ENST00000587818 TRAPPC3LQ5T215 181 aa26.82■■□□□ 1.88
TRAPPC6A-203ENST00000587818 NLGN2Q8NFZ4 835 aa26.82■■□□□ 1.88
TRAPPC6A-203ENST00000587818 GAS2L2Q8NHY3 880 aa26.82■■□□□ 1.88
TRAPPC6A-203ENST00000587818 RTCBQ9Y3I0 505 aaKnown RBP26.82■■□□□ 1.88
TRAPPC6A-203ENST00000587818 GNAT3A8MTJ3 354 aa26.81■■□□□ 1.88
TRAPPC6A-203ENST00000587818 RC3H1Q5TC82 1133 aaKnown RBP26.81■■□□□ 1.88
TRAPPC6A-203ENST00000587818 DNAJC10Q8IXB1 793 aa26.8■■□□□ 1.88
TRAPPC6A-203ENST00000587818 MYH14Q7Z406 1995 aaKnown RBP26.8■■□□□ 1.88
TRAPPC6A-203ENST00000587818 RPS6KA4O75676 772 aa26.79■■□□□ 1.88
TRAPPC6A-203ENST00000587818 ARHGEF1Q92888 912 aaKnown RBP26.79■■□□□ 1.88
TRAPPC6A-203ENST00000587818 CRKLP46109 303 aaKnown RBP26.78■■□□□ 1.88
TRAPPC6A-203ENST00000587818 CNTNAP4Q9C0A0 1308 aa26.78■■□□□ 1.88
TRAPPC6A-203ENST00000587818 MAP3K5Q99683 1374 aa26.78■■□□□ 1.88
TRAPPC6A-203ENST00000587818 COL5A3P25940 1745 aaPredicted RBP26.76■■□□□ 1.88
TRAPPC6A-203ENST00000587818 ZNF831Q5JPB2 1677 aa26.76■■□□□ 1.87
TRAPPC6A-203ENST00000587818 FCHSD2O94868 740 aa26.76■■□□□ 1.87
TRAPPC6A-203ENST00000587818 PELP1Q8IZL8 1130 aaKnown RBP26.76■■□□□ 1.87
TRAPPC6A-203ENST00000587818 TEFQ10587 303 aa26.75■■□□□ 1.87
TRAPPC6A-203ENST00000587818 GPR162Q16538 588 aa26.75■■□□□ 1.87
TRAPPC6A-203ENST00000587818 MRC1P22897 1456 aa26.74■■□□□ 1.87
TRAPPC6A-203ENST00000587818 ADAMTS7Q9UKP4 1686 aa26.74■■□□□ 1.87
TRAPPC6A-203ENST00000587818 YY1P25490 414 aa26.74■■□□□ 1.87
TRAPPC6A-203ENST00000587818 INTS5Q6P9B9 1019 aaKnown RBP26.74■■□□□ 1.87
TRAPPC6A-203ENST00000587818 RFC4P35249 363 aa26.73■■□□□ 1.87
TRAPPC6A-203ENST00000587818 TJP1Q07157 1748 aa26.73■■□□□ 1.87
TRAPPC6A-203ENST00000587818 CYP19A1P11511 503 aaPredicted RBP26.71■■□□□ 1.87
TRAPPC6A-203ENST00000587818 MMP10P09238 476 aa26.7■■□□□ 1.86
TRAPPC6A-203ENST00000587818 DCTN1Q14203 1278 aa26.7■■□□□ 1.86
TRAPPC6A-203ENST00000587818 MCM10Q7L590 875 aa26.7■■□□□ 1.86
TRAPPC6A-203ENST00000587818 TTC5Q8N0Z6 440 aa26.7■■□□□ 1.86
TRAPPC6A-203ENST00000587818 CCDC87Q9NVE4 849 aa26.7■■□□□ 1.86
TRAPPC6A-203ENST00000587818 SRP68Q9UHB9 627 aaKnown RBP26.7■■□□□ 1.86
TRAPPC6A-203ENST00000587818 KCNQ3O43525 872 aa26.69■■□□□ 1.86
TRAPPC6A-203ENST00000587818 GYS1P13807 737 aa26.69■■□□□ 1.86
TRAPPC6A-203ENST00000587818 ADRA2BP18089 450 aa26.69■■□□□ 1.86
TRAPPC6A-203ENST00000587818 RALBP1Q15311 655 aa26.69■■□□□ 1.86
TRAPPC6A-203ENST00000587818 KCPQ6ZWJ8 1503 aa26.69■■□□□ 1.86
TRAPPC6A-203ENST00000587818 NLGN1Q8N2Q7 840 aa26.68■■□□□ 1.86
TRAPPC6A-203ENST00000587818 ZNF496Q96IT1 587 aaPredicted RBP26.68■■□□□ 1.86
TRAPPC6A-203ENST00000587818 CD2APQ9Y5K6 639 aa26.68■■□□□ 1.86
TRAPPC6A-203ENST00000587818 ZNF790Q6PG37 636 aa26.67■■□□□ 1.86
TRAPPC6A-203ENST00000587818 RTF1Q92541 710 aaKnown RBP26.67■■□□□ 1.86
TRAPPC6A-203ENST00000587818 BTBD11A6QL63 1104 aa26.66■■□□□ 1.86
TRAPPC6A-203ENST00000587818 WWC3Q9ULE0 1092 aa26.66■■□□□ 1.86
TRAPPC6A-203ENST00000587818 VSIG10Q8N0Z9 540 aa26.65■■□□□ 1.86
TRAPPC6A-203ENST00000587818 ZBTB1Q9Y2K1 713 aa26.65■■□□□ 1.86
TRAPPC6A-203ENST00000587818 CEMIPQ8WUJ3 1361 aa26.65■■□□□ 1.86
TRAPPC6A-203ENST00000587818 CANXP27824 592 aaKnown RBP26.64■■□□□ 1.86
TRAPPC6A-203ENST00000587818 YBX3P16989 372 aaKnown RBP eCLIP26.63■■□□□ 1.85
TRAPPC6A-203ENST00000587818 PLEKHF1Q96S99 279 aa26.63■■□□□ 1.85
TRAPPC6A-203ENST00000587818 SIPA1L3O60292 1781 aaPredicted RBP26.63■■□□□ 1.85
TRAPPC6A-203ENST00000587818 FKBP8Q14318 412 aa26.62■■□□□ 1.85
TRAPPC6A-203ENST00000587818 SOS1Q07889 1333 aaPredicted RBP26.62■■□□□ 1.85
TRAPPC6A-203ENST00000587818 NEFMP07197 916 aa26.61■■□□□ 1.85
TRAPPC6A-203ENST00000587818 C4AP0C0L4 1744 aa26.61■■□□□ 1.85
TRAPPC6A-203ENST00000587818 USP42Q9H9J4 1324 aaKnown RBP26.61■■□□□ 1.85
TRAPPC6A-203ENST00000587818 CICQ96RK0 1608 aaPredicted RBP26.61■■□□□ 1.85
TRAPPC6A-203ENST00000587818 UBR2Q8IWV8 1755 aa26.61■■□□□ 1.85
TRAPPC6A-203ENST00000587818 HEG1Q9ULI3 1381 aa26.6■■□□□ 1.85
TRAPPC6A-203ENST00000587818 USPL1Q5W0Q7 1092 aa26.6■■□□□ 1.85
TRAPPC6A-203ENST00000587818 FMNL2Q96PY5 1086 aa26.6■■□□□ 1.85
TRAPPC6A-203ENST00000587818 MIS18AQ9NYP9 233 aa26.6■■□□□ 1.85
TRAPPC6A-203ENST00000587818 ZPR1O75312 459 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms