RNA–Protein interactions for RNA: ENST00000586856.1

ERCC2-209, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-209ENST00000586856 SPON1Q9HCB6 807 aa32.16■■■□□ 2.74
ERCC2-209ENST00000586856 MAP3K5Q99683 1374 aa32.16■■■□□ 2.74
ERCC2-209ENST00000586856 ZBTB7AO95365 584 aa32.15■■■□□ 2.74
ERCC2-209ENST00000586856 TFCP2L1Q9NZI6 479 aa32.15■■■□□ 2.74
ERCC2-209ENST00000586856 RNMTO43148 476 aaKnown RBP32.14■■■□□ 2.74
ERCC2-209ENST00000586856 NFATC2IPQ8NCF5 419 aa32.14■■■□□ 2.74
ERCC2-209ENST00000586856 PHACTR3Q96KR7 559 aa32.14■■■□□ 2.74
ERCC2-209ENST00000586856 LGR6Q9HBX8 967 aa32.14■■■□□ 2.74
ERCC2-209ENST00000586856 PNPLA7Q6ZV29 1317 aa32.14■■■□□ 2.74
ERCC2-209ENST00000586856 MYBBP1AQ9BQG0 1328 aaKnown RBP32.14■■■□□ 2.74
ERCC2-209ENST00000586856 FCHSD2O94868 740 aa32.12■■■□□ 2.73
ERCC2-209ENST00000586856 HMGB2P26583 209 aaKnown RBP32.12■■■□□ 2.73
ERCC2-209ENST00000586856 SLC52A2Q9HAB3 445 aa32.12■■■□□ 2.73
ERCC2-209ENST00000586856 UBR3Q6ZT12 1888 aa32.1■■■□□ 2.73
ERCC2-209ENST00000586856 COL5A3P25940 1745 aaPredicted RBP32.1■■■□□ 2.73
ERCC2-209ENST00000586856 ATP6V1AP38606 617 aa32.09■■■□□ 2.73
ERCC2-209ENST00000586856 ITPK1Q13572 414 aa32.09■■■□□ 2.73
ERCC2-209ENST00000586856 GNAT3A8MTJ3 354 aa32.08■■■□□ 2.73
ERCC2-209ENST00000586856 LINC00116Q8NCU8 138 aa32.08■■■□□ 2.73
ERCC2-209ENST00000586856 MTFR1LQ9H019 292 aa32.08■■■□□ 2.73
ERCC2-209ENST00000586856 SIPA1L3O60292 1781 aaPredicted RBP32.08■■■□□ 2.73
ERCC2-209ENST00000586856 CICQ96RK0 1608 aaPredicted RBP32.08■■■□□ 2.73
ERCC2-209ENST00000586856 ZNF316A6NFI3 1004 aaPredicted RBP32.07■■■□□ 2.72
ERCC2-209ENST00000586856 RBM42Q9BTD8 480 aaKnown RBP32.07■■■□□ 2.72
ERCC2-209ENST00000586856 ATF5Q9Y2D1 282 aaPredicted RBP32.07■■■□□ 2.72
ERCC2-209ENST00000586856 AK7Q96M32 723 aa32.06■■■□□ 2.72
ERCC2-209ENST00000586856 SLC4A9Q96Q91 983 aa32.06■■■□□ 2.72
ERCC2-209ENST00000586856 TJP1Q07157 1748 aa32.06■■■□□ 2.72
ERCC2-209ENST00000586856 PRKRIP1Q9H875 184 aaPredicted RBP32.05■■■□□ 2.72
ERCC2-209ENST00000586856 COL24A1Q17RW2 1714 aa32.04■■■□□ 2.72
ERCC2-209ENST00000586856 PTGER2P43116 358 aa32.03■■■□□ 2.72
ERCC2-209ENST00000586856 UBR2Q8IWV8 1755 aa32.03■■■□□ 2.72
ERCC2-209ENST00000586856 PTCD1O75127 700 aaKnown RBP32.02■■■□□ 2.72
ERCC2-209ENST00000586856 IL17REQ8NFR9 667 aa32.02■■■□□ 2.72
ERCC2-209ENST00000586856 PPP1R1BQ9UD71 204 aaPredicted RBP32.02■■■□□ 2.72
ERCC2-209ENST00000586856 KCPQ6ZWJ8 1503 aa32.01■■■□□ 2.72
ERCC2-209ENST00000586856 COL23A1Q86Y22 540 aaPredicted RBP32.01■■■□□ 2.71
ERCC2-209ENST00000586856 SLC16A10Q8TF71 515 aa32.01■■■□□ 2.71
ERCC2-209ENST00000586856 DLG5Q8TDM6 1919 aa32■■■□□ 2.71
ERCC2-209ENST00000586856 CEMIPQ8WUJ3 1361 aa32■■■□□ 2.71
ERCC2-209ENST00000586856 AMIGO3Q86WK7 504 aa31.99■■■□□ 2.71
ERCC2-209ENST00000586856 SGIP1Q9BQI5 828 aa31.99■■■□□ 2.71
ERCC2-209ENST00000586856 MSH5O43196 834 aa31.98■■■□□ 2.71
ERCC2-209ENST00000586856 TEFQ10587 303 aa31.98■■■□□ 2.71
ERCC2-209ENST00000586856 SLC39A6Q13433 755 aa31.98■■■□□ 2.71
ERCC2-209ENST00000586856 FLAD1Q8NFF5 587 aa31.98■■■□□ 2.71
ERCC2-209ENST00000586856 NEFMP07197 916 aa31.97■■■□□ 2.71
ERCC2-209ENST00000586856 PLEKHF1Q96S99 279 aa31.97■■■□□ 2.71
ERCC2-209ENST00000586856 GNPATO15228 680 aa31.96■■■□□ 2.71
ERCC2-209ENST00000586856 PHF14O94880 888 aa31.96■■■□□ 2.71
ERCC2-209ENST00000586856 MYH14Q7Z406 1995 aaKnown RBP31.96■■■□□ 2.71
ERCC2-209ENST00000586856 CNTNAP4Q9C0A0 1308 aa31.95■■■□□ 2.7
ERCC2-209ENST00000586856 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.94■■■□□ 2.7
ERCC2-209ENST00000586856 SSFA2P28290 1259 aa31.94■■■□□ 2.7
ERCC2-209ENST00000586856 SMIM5Q71RC9 77 aa31.94■■■□□ 2.7
ERCC2-209ENST00000586856 RTF1Q92541 710 aaKnown RBP31.93■■■□□ 2.7
ERCC2-209ENST00000586856 PNNQ9H307 717 aaKnown RBP31.92■■■□□ 2.7
ERCC2-209ENST00000586856 MAPK8IP3Q9UPT6 1336 aa31.92■■■□□ 2.7
ERCC2-209ENST00000586856 MCM10Q7L590 875 aa31.91■■■□□ 2.7
ERCC2-209ENST00000586856 RC3H1Q5TC82 1133 aaKnown RBP31.9■■■□□ 2.7
ERCC2-209ENST00000586856 TTC5Q8N0Z6 440 aa31.9■■■□□ 2.7
ERCC2-209ENST00000586856 HTATSF1O43719 755 aaKnown RBP31.89■■■□□ 2.7
ERCC2-209ENST00000586856 C4AP0C0L4 1744 aa31.89■■■□□ 2.69
ERCC2-209ENST00000586856 POLD1P28340 1107 aa31.88■■■□□ 2.69
ERCC2-209ENST00000586856 DCTN1Q14203 1278 aa31.88■■■□□ 2.69
ERCC2-209ENST00000586856 NFE2L2Q16236 605 aa31.88■■■□□ 2.69
ERCC2-209ENST00000586856 MSL1Q68DK7 614 aa31.88■■■□□ 2.69
ERCC2-209ENST00000586856 DNAJC10Q8IXB1 793 aa31.88■■■□□ 2.69
ERCC2-209ENST00000586856 CRKLP46109 303 aaKnown RBP31.87■■■□□ 2.69
ERCC2-209ENST00000586856 ARXQ96QS3 562 aa31.87■■■□□ 2.69
ERCC2-209ENST00000586856 RTCBQ9Y3I0 505 aaKnown RBP31.87■■■□□ 2.69
ERCC2-209ENST00000586856 WDR43Q15061 677 aaKnown RBP eCLIP31.86■■■□□ 2.69
ERCC2-209ENST00000586856 ZNF790Q6PG37 636 aa31.86■■■□□ 2.69
ERCC2-209ENST00000586856 VSIG10Q8N0Z9 540 aa31.84■■■□□ 2.69
ERCC2-209ENST00000586856 BTBD11A6QL63 1104 aa31.83■■■□□ 2.69
ERCC2-209ENST00000586856 RPS6KA4O75676 772 aa31.83■■■□□ 2.69
ERCC2-209ENST00000586856 ZNF496Q96IT1 587 aaPredicted RBP31.83■■■□□ 2.69
ERCC2-209ENST00000586856 ADRA2BP18089 450 aa31.82■■■□□ 2.68
ERCC2-209ENST00000586856 FHDC1Q9C0D6 1143 aaPredicted RBP31.82■■■□□ 2.68
ERCC2-209ENST00000586856 HEG1Q9ULI3 1381 aa31.81■■■□□ 2.68
ERCC2-209ENST00000586856 CYP19A1P11511 503 aaPredicted RBP31.8■■■□□ 2.68
ERCC2-209ENST00000586856 TRAPPC3LQ5T215 181 aa31.8■■■□□ 2.68
ERCC2-209ENST00000586856 INTS5Q6P9B9 1019 aaKnown RBP31.8■■■□□ 2.68
ERCC2-209ENST00000586856 CCDC87Q9NVE4 849 aa31.8■■■□□ 2.68
ERCC2-209ENST00000586856 KCNQ3O43525 872 aa31.79■■■□□ 2.68
ERCC2-209ENST00000586856 CCDC146Q8IYE0 955 aa31.79■■■□□ 2.68
ERCC2-209ENST00000586856 KDM3BQ7LBC6 1761 aa31.79■■■□□ 2.68
ERCC2-209ENST00000586856 FMNL2Q96PY5 1086 aa31.78■■■□□ 2.68
ERCC2-209ENST00000586856 ARHGEF1Q92888 912 aaKnown RBP31.77■■■□□ 2.68
ERCC2-209ENST00000586856 ADAMTS8Q9UP79 889 aa31.77■■■□□ 2.68
ERCC2-209ENST00000586856 THUMPD2Q9BTF0 503 aaKnown RBP31.76■■■□□ 2.67
ERCC2-209ENST00000586856 SYT17Q9BSW7 474 aa31.75■■■□□ 2.67
ERCC2-209ENST00000586856 TAF7Q15545 349 aaPredicted RBP31.74■■■□□ 2.67
ERCC2-209ENST00000586856 KLHL34Q8N239 644 aa31.74■■■□□ 2.67
ERCC2-209ENST00000586856 RUNDC1Q96C34 613 aa31.74■■■□□ 2.67
ERCC2-209ENST00000586856 SOS1Q07889 1333 aaPredicted RBP31.74■■■□□ 2.67
ERCC2-209ENST00000586856 ANP32CO43423 234 aa31.73■■■□□ 2.67
ERCC2-209ENST00000586856 RFC4P35249 363 aa31.73■■■□□ 2.67
ERCC2-209ENST00000586856 TMPOP42166 694 aaKnown RBP31.73■■■□□ 2.67
ERCC2-209ENST00000586856 RIPK4P57078 832 aa31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms