RNA–Protein interactions for RNA: ENST00000586607.5

H3F3B-204, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 4 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-204ENST00000586607 LOC102724428A0A0B4J2F2 783 aa12.99□□□□□ -0.33
H3F3B-204ENST00000586607 SIK1P57059 783 aa12.99□□□□□ -0.33
H3F3B-204ENST00000586607 IL17REQ8NFR9 667 aa12.99□□□□□ -0.33
H3F3B-204ENST00000586607 STK32BQ9NY57 414 aa12.99□□□□□ -0.33
H3F3B-204ENST00000586607 KAT6BQ8WYB5 2073 aa12.99□□□□□ -0.33
H3F3B-204ENST00000586607 CICQ96RK0 1608 aaPredicted RBP12.99□□□□□ -0.33
H3F3B-204ENST00000586607 R3HDM1Q15032 1099 aaKnown RBP12.98□□□□□ -0.33
H3F3B-204ENST00000586607 WDR43Q15061 677 aaKnown RBP eCLIP12.98□□□□□ -0.33
H3F3B-204ENST00000586607 MAPK8IP3Q9UPT6 1336 aa12.97□□□□□ -0.33
H3F3B-204ENST00000586607 NFE2L2Q16236 605 aa12.97□□□□□ -0.33
H3F3B-204ENST00000586607 QSER1Q2KHR3 1735 aa12.96□□□□□ -0.33
H3F3B-204ENST00000586607 RTF1Q92541 710 aaKnown RBP12.96□□□□□ -0.33
H3F3B-204ENST00000586607 RUNDC1Q96C34 613 aa12.96□□□□□ -0.33
H3F3B-204ENST00000586607 ADAMTS8Q9UP79 889 aa12.96□□□□□ -0.33
H3F3B-204ENST00000586607 SIPA1L3O60292 1781 aaPredicted RBP12.95□□□□□ -0.34
H3F3B-204ENST00000586607 PSDA5PKW4 1024 aaPredicted RBP12.95□□□□□ -0.34
H3F3B-204ENST00000586607 TEFQ10587 303 aa12.95□□□□□ -0.34
H3F3B-204ENST00000586607 ZNF827Q17R98 1081 aa12.95□□□□□ -0.34
H3F3B-204ENST00000586607 VSIG10Q8N0Z9 540 aa12.95□□□□□ -0.34
H3F3B-204ENST00000586607 SLC4A9Q96Q91 983 aa12.95□□□□□ -0.34
H3F3B-204ENST00000586607 C5P01031 1676 aa12.95□□□□□ -0.34
H3F3B-204ENST00000586607 CASZ1Q86V15 1759 aa12.94□□□□□ -0.34
H3F3B-204ENST00000586607 PNISRQ8TF01 805 aaKnown RBP12.94□□□□□ -0.34
H3F3B-204ENST00000586607 VIRMAQ69YN4 1812 aaKnown RBP12.94□□□□□ -0.34
H3F3B-204ENST00000586607 TAF1LQ8IZX4 1826 aa12.94□□□□□ -0.34
H3F3B-204ENST00000586607 LRP5O75197 1615 aa12.94□□□□□ -0.34
H3F3B-204ENST00000586607 KCPQ6ZWJ8 1503 aa12.93□□□□□ -0.34
H3F3B-204ENST00000586607 ATP6V1AP38606 617 aa12.93□□□□□ -0.34
H3F3B-204ENST00000586607 TMPOP42166 694 aaKnown RBP12.93□□□□□ -0.34
H3F3B-204ENST00000586607 KCNQ4P56696 695 aa12.93□□□□□ -0.34
H3F3B-204ENST00000586607 LMOD3Q0VAK6 560 aa12.93□□□□□ -0.34
H3F3B-204ENST00000586607 ITPK1Q13572 414 aa12.93□□□□□ -0.34
H3F3B-204ENST00000586607 RC3H1Q5TC82 1133 aaKnown RBP12.93□□□□□ -0.34
H3F3B-204ENST00000586607 FLAD1Q8NFF5 587 aa12.93□□□□□ -0.34
H3F3B-204ENST00000586607 SLC16A10Q8TF71 515 aa12.93□□□□□ -0.34
H3F3B-204ENST00000586607 C4BP0C0L5 1744 aa12.93□□□□□ -0.34
H3F3B-204ENST00000586607 CNTNAP4Q9C0A0 1308 aa12.92□□□□□ -0.34
H3F3B-204ENST00000586607 UBR2Q8IWV8 1755 aa12.92□□□□□ -0.34
H3F3B-204ENST00000586607 CCDC184Q52MB2 194 aa12.92□□□□□ -0.34
H3F3B-204ENST00000586607 NCBP3Q53F19 620 aaKnown RBP12.92□□□□□ -0.34
H3F3B-204ENST00000586607 ZNF790Q6PG37 636 aa12.92□□□□□ -0.34
H3F3B-204ENST00000586607 MCM10Q7L590 875 aa12.92□□□□□ -0.34
H3F3B-204ENST00000586607 LINC00116Q8NCU8 138 aa12.92□□□□□ -0.34
H3F3B-204ENST00000586607 PNPLA7Q6ZV29 1317 aa12.91□□□□□ -0.34
H3F3B-204ENST00000586607 TAF7Q15545 349 aaPredicted RBP12.91□□□□□ -0.34
H3F3B-204ENST00000586607 TTC5Q8N0Z6 440 aa12.91□□□□□ -0.34
H3F3B-204ENST00000586607 RBM42Q9BTD8 480 aaKnown RBP12.91□□□□□ -0.34
H3F3B-204ENST00000586607 MRS2Q9HD23 443 aa12.91□□□□□ -0.34
H3F3B-204ENST00000586607 BABAM1Q9NWV8 329 aa12.91□□□□□ -0.34
H3F3B-204ENST00000586607 TFCP2L1Q9NZI6 479 aa12.91□□□□□ -0.34
H3F3B-204ENST00000586607 COL5A3P25940 1745 aaPredicted RBP12.91□□□□□ -0.34
H3F3B-204ENST00000586607 BTBD11A6QL63 1104 aa12.9□□□□□ -0.34
H3F3B-204ENST00000586607 PTCD1O75127 700 aaKnown RBP12.9□□□□□ -0.34
H3F3B-204ENST00000586607 SSFA2P28290 1259 aa12.9□□□□□ -0.34
H3F3B-204ENST00000586607 RIPK4P57078 832 aa12.9□□□□□ -0.34
H3F3B-204ENST00000586607 SLC39A6Q13433 755 aa12.9□□□□□ -0.34
H3F3B-204ENST00000586607 AK7Q96M32 723 aa12.9□□□□□ -0.34
H3F3B-204ENST00000586607 DLG5Q8TDM6 1919 aa12.9□□□□□ -0.35
H3F3B-204ENST00000586607 TJP1Q07157 1748 aa12.89□□□□□ -0.35
H3F3B-204ENST00000586607 ADRA2BP18089 450 aa12.89□□□□□ -0.35
H3F3B-204ENST00000586607 DCTN1Q14203 1278 aa12.89□□□□□ -0.35
H3F3B-204ENST00000586607 FMNL2Q96PY5 1086 aa12.89□□□□□ -0.35
H3F3B-204ENST00000586607 TEX13AQ9BXU3 409 aaPredicted RBP12.89□□□□□ -0.35
H3F3B-204ENST00000586607 MTFR1LQ9H019 292 aa12.89□□□□□ -0.35
H3F3B-204ENST00000586607 SPON1Q9HCB6 807 aa12.89□□□□□ -0.35
H3F3B-204ENST00000586607 HEG1Q9ULI3 1381 aa12.89□□□□□ -0.35
H3F3B-204ENST00000586607 TUBGCP6Q96RT7 1819 aa12.88□□□□□ -0.35
H3F3B-204ENST00000586607 CCDC146Q8IYE0 955 aa12.88□□□□□ -0.35
H3F3B-204ENST00000586607 ZNF496Q96IT1 587 aaPredicted RBP12.88□□□□□ -0.35
H3F3B-204ENST00000586607 PDGFDQ9GZP0 370 aaPredicted RBP12.88□□□□□ -0.35
H3F3B-204ENST00000586607 TRIM35Q9UPQ4 493 aa12.88□□□□□ -0.35
H3F3B-204ENST00000586607 COL24A1Q17RW2 1714 aa12.88□□□□□ -0.35
H3F3B-204ENST00000586607 UBR3Q6ZT12 1888 aa12.87□□□□□ -0.35
H3F3B-204ENST00000586607 RPS6KA4O75676 772 aa12.87□□□□□ -0.35
H3F3B-204ENST00000586607 CYP19A1P11511 503 aaPredicted RBP12.87□□□□□ -0.35
H3F3B-204ENST00000586607 COL23A1Q86Y22 540 aaPredicted RBP12.87□□□□□ -0.35
H3F3B-204ENST00000586607 SGIP1Q9BQI5 828 aa12.87□□□□□ -0.35
H3F3B-204ENST00000586607 SRCAPQ6ZRS2 3230 aa12.87□□□□□ -0.35
H3F3B-204ENST00000586607 GNPATO15228 680 aa12.86□□□□□ -0.35
H3F3B-204ENST00000586607 CRKLP46109 303 aaKnown RBP12.86□□□□□ -0.35
H3F3B-204ENST00000586607 CCDC27Q2M243 656 aa12.86□□□□□ -0.35
H3F3B-204ENST00000586607 DNAJC10Q8IXB1 793 aa12.86□□□□□ -0.35
H3F3B-204ENST00000586607 RTCBQ9Y3I0 505 aaKnown RBP12.86□□□□□ -0.35
H3F3B-204ENST00000586607 KDM3BQ7LBC6 1761 aa12.85□□□□□ -0.35
H3F3B-204ENST00000586607 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.85□□□□□ -0.35
H3F3B-204ENST00000586607 CCER2I3L3R5 266 aa12.85□□□□□ -0.35
H3F3B-204ENST00000586607 APAF1O14727 1248 aa12.85□□□□□ -0.35
H3F3B-204ENST00000586607 STARD3NLO95772 234 aa12.85□□□□□ -0.35
H3F3B-204ENST00000586607 PTGER2P43116 358 aa12.85□□□□□ -0.35
H3F3B-204ENST00000586607 INTS5Q6P9B9 1019 aaKnown RBP12.85□□□□□ -0.35
H3F3B-204ENST00000586607 AMIGO3Q86WK7 504 aa12.85□□□□□ -0.35
H3F3B-204ENST00000586607 KCNQ3O43525 872 aa12.84□□□□□ -0.35
H3F3B-204ENST00000586607 CALD1Q05682 793 aaKnown RBP12.84□□□□□ -0.35
H3F3B-204ENST00000586607 NGEFQ8N5V2 710 aa12.84□□□□□ -0.35
H3F3B-204ENST00000586607 THUMPD2Q9BTF0 503 aaKnown RBP12.84□□□□□ -0.35
H3F3B-204ENST00000586607 CCDC87Q9NVE4 849 aa12.84□□□□□ -0.35
H3F3B-204ENST00000586607 RRP7AQ9Y3A4 280 aaKnown RBP12.84□□□□□ -0.35
H3F3B-204ENST00000586607 CHL1O00533 1208 aa12.83□□□□□ -0.36
H3F3B-204ENST00000586607 ZBTB7AO95365 584 aa12.83□□□□□ -0.36
H3F3B-204ENST00000586607 SNRPA1P09661 255 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms