RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 IL17REQ8NFR9 667 aa26.3■■□□□ 1.8
ATG4D-204ENST00000586417 SSH1Q8WYL5 1049 aa26.3■■□□□ 1.8
ATG4D-204ENST00000586417 LGR6Q9HBX8 967 aa26.3■■□□□ 1.8
ATG4D-204ENST00000586417 TNS2Q63HR2 1409 aa26.29■■□□□ 1.8
ATG4D-204ENST00000586417 A0A0G2JS52 829 aa26.29■■□□□ 1.8
ATG4D-204ENST00000586417 MYT1Q01538 1121 aa26.29■■□□□ 1.8
ATG4D-204ENST00000586417 CHL1O00533 1208 aa26.28■■□□□ 1.8
ATG4D-204ENST00000586417 ONECUT3O60422 494 aaPredicted RBP26.28■■□□□ 1.8
ATG4D-204ENST00000586417 FRAT1Q92837 279 aaPredicted RBP26.28■■□□□ 1.8
ATG4D-204ENST00000586417 POTEAQ6S8J7 498 aa26.28■■□□□ 1.8
ATG4D-204ENST00000586417 RTF1Q92541 710 aaKnown RBP26.28■■□□□ 1.8
ATG4D-204ENST00000586417 CANXP27824 592 aaKnown RBP26.27■■□□□ 1.8
ATG4D-204ENST00000586417 ZNF428Q96B54 188 aa26.27■■□□□ 1.8
ATG4D-204ENST00000586417 VAMP4O75379 141 aa26.26■■□□□ 1.79
ATG4D-204ENST00000586417 TSPYL6Q8N831 410 aa26.26■■□□□ 1.79
ATG4D-204ENST00000586417 SMC4Q9NTJ3 1288 aa26.26■■□□□ 1.79
ATG4D-204ENST00000586417 KDM6AO15550 1401 aaPredicted RBP26.25■■□□□ 1.79
ATG4D-204ENST00000586417 RBM6P78332 1123 aaKnown RBP26.25■■□□□ 1.79
ATG4D-204ENST00000586417 ALDH1L2Q3SY69 923 aa26.25■■□□□ 1.79
ATG4D-204ENST00000586417 SEPT12Q8IYM1 358 aa26.24■■□□□ 1.79
ATG4D-204ENST00000586417 TNNQ9UQP3 1299 aa26.24■■□□□ 1.79
ATG4D-204ENST00000586417 SCN11AQ9UI33 1791 aa26.24■■□□□ 1.79
ATG4D-204ENST00000586417 ADAMTS7Q9UKP4 1686 aa26.23■■□□□ 1.79
ATG4D-204ENST00000586417 RNMTO43148 476 aaKnown RBP26.23■■□□□ 1.79
ATG4D-204ENST00000586417 MARCH10Q8NA82 808 aaPredicted RBP26.23■■□□□ 1.79
ATG4D-204ENST00000586417 C8orf58Q8NAV2 365 aa26.23■■□□□ 1.79
ATG4D-204ENST00000586417 PANK1Q8TE04 598 aa26.23■■□□□ 1.79
ATG4D-204ENST00000586417 CEMIPQ8WUJ3 1361 aa26.22■■□□□ 1.79
ATG4D-204ENST00000586417 RLBP1P12271 317 aa26.21■■□□□ 1.79
ATG4D-204ENST00000586417 BRPF1P55201 1214 aaPredicted RBP26.21■■□□□ 1.79
ATG4D-204ENST00000586417 NKX1-1Q15270 411 aaPredicted RBP26.21■■□□□ 1.79
ATG4D-204ENST00000586417 TWISTNBQ3B726 338 aaPredicted RBP26.21■■□□□ 1.79
ATG4D-204ENST00000586417 RXRBP28702 533 aa26.2■■□□□ 1.79
ATG4D-204ENST00000586417 ZKSCAN2Q63HK3 967 aa26.2■■□□□ 1.79
ATG4D-204ENST00000586417 DCAF5Q96JK2 942 aa26.2■■□□□ 1.79
ATG4D-204ENST00000586417 BRWD3Q6RI45 1802 aa26.2■■□□□ 1.78
ATG4D-204ENST00000586417 TOGARAM1Q9Y4F4 1720 aa26.19■■□□□ 1.78
ATG4D-204ENST00000586417 KAT6BQ8WYB5 2073 aa26.19■■□□□ 1.78
ATG4D-204ENST00000586417 KIF16BQ96L93 1317 aa26.18■■□□□ 1.78
ATG4D-204ENST00000586417 ELL2O00472 640 aaPredicted RBP26.18■■□□□ 1.78
ATG4D-204ENST00000586417 HSP90AB1P08238 724 aaKnown RBP26.18■■□□□ 1.78
ATG4D-204ENST00000586417 FAM182BQ5T319 152 aa26.18■■□□□ 1.78
ATG4D-204ENST00000586417 COG6Q9Y2V7 657 aa26.18■■□□□ 1.78
ATG4D-204ENST00000586417 EP400Q96L91 3159 aa26.17■■□□□ 1.78
ATG4D-204ENST00000586417 MIS18AQ9NYP9 233 aa26.17■■□□□ 1.78
ATG4D-204ENST00000586417 NOB1Q9ULX3 412 aaKnown RBP26.17■■□□□ 1.78
ATG4D-204ENST00000586417 SIPA1L3O60292 1781 aaPredicted RBP26.15■■□□□ 1.78
ATG4D-204ENST00000586417 TRIM27P14373 513 aa26.15■■□□□ 1.78
ATG4D-204ENST00000586417 KRT24Q2M2I5 525 aa26.15■■□□□ 1.78
ATG4D-204ENST00000586417 ATF7IPQ6VMQ6 1270 aa26.15■■□□□ 1.78
ATG4D-204ENST00000586417 MRPL50Q8N5N7 158 aaKnown RBP26.15■■□□□ 1.78
ATG4D-204ENST00000586417 CLUAP1Q96AJ1 413 aa26.15■■□□□ 1.78
ATG4D-204ENST00000586417 TSPYL4Q9UJ04 414 aa26.15■■□□□ 1.78
ATG4D-204ENST00000586417 TEFQ10587 303 aa26.14■■□□□ 1.78
ATG4D-204ENST00000586417 DZIP1LQ8IYY4 767 aaKnown RBP26.14■■□□□ 1.78
ATG4D-204ENST00000586417 NFATC2IPQ8NCF5 419 aa26.14■■□□□ 1.78
ATG4D-204ENST00000586417 SLC52A2Q9HAB3 445 aa26.13■■□□□ 1.77
ATG4D-204ENST00000586417 RGS12O14924 1447 aa26.13■■□□□ 1.77
ATG4D-204ENST00000586417 ITGB4P16144 1822 aa26.13■■□□□ 1.77
ATG4D-204ENST00000586417 MS4A1P11836 297 aa26.12■■□□□ 1.77
ATG4D-204ENST00000586417 TAF7Q15545 349 aaPredicted RBP26.12■■□□□ 1.77
ATG4D-204ENST00000586417 DOT1LQ8TEK3 1739 aa26.12■■□□□ 1.77
ATG4D-204ENST00000586417 BABAM1Q9NWV8 329 aa26.12■■□□□ 1.77
ATG4D-204ENST00000586417 MRC1P22897 1456 aa26.12■■□□□ 1.77
ATG4D-204ENST00000586417 ERVV-2B6SEH9 535 aa26.1■■□□□ 1.77
ATG4D-204ENST00000586417 IPO8O15397 1037 aaKnown RBP26.1■■□□□ 1.77
ATG4D-204ENST00000586417 CABP4P57796 275 aa26.1■■□□□ 1.77
ATG4D-204ENST00000586417 KDM2BQ8NHM5 1336 aa26.1■■□□□ 1.77
ATG4D-204ENST00000586417 MVPQ14764 893 aaKnown RBP26.1■■□□□ 1.77
ATG4D-204ENST00000586417 FTSJ3Q8IY81 847 aaKnown RBP26.1■■□□□ 1.77
ATG4D-204ENST00000586417 ACSBG1Q96GR2 724 aa26.1■■□□□ 1.77
ATG4D-204ENST00000586417 KRT27Q7Z3Y8 459 aa26.08■■□□□ 1.77
ATG4D-204ENST00000586417 ARHGAP45Q92619 1136 aa26.08■■□□□ 1.77
ATG4D-204ENST00000586417 TCERG1O14776 1098 aaKnown RBP26.07■■□□□ 1.76
ATG4D-204ENST00000586417 PRIM1P49642 420 aaKnown RBP26.07■■□□□ 1.76
ATG4D-204ENST00000586417 AAMPQ13685 434 aa26.07■■□□□ 1.76
ATG4D-204ENST00000586417 BTBD11A6QL63 1104 aa26.07■■□□□ 1.76
ATG4D-204ENST00000586417 KCNQ3O43525 872 aa26.07■■□□□ 1.76
ATG4D-204ENST00000586417 SYTL4Q96C24 671 aaPredicted RBP26.07■■□□□ 1.76
ATG4D-204ENST00000586417 KDM3BQ7LBC6 1761 aa26.06■■□□□ 1.76
ATG4D-204ENST00000586417 TSHZ2Q9NRE2 1034 aa26.06■■□□□ 1.76
ATG4D-204ENST00000586417 KCNQ2O43526 872 aa26.05■■□□□ 1.76
ATG4D-204ENST00000586417 SLC39A6Q13433 755 aa26.05■■□□□ 1.76
ATG4D-204ENST00000586417 PIGBQ92521 554 aa26.05■■□□□ 1.76
ATG4D-204ENST00000586417 TMOD3Q9NYL9 352 aa26.05■■□□□ 1.76
ATG4D-204ENST00000586417 PTF1AQ7RTS3 328 aa26.04■■□□□ 1.76
ATG4D-204ENST00000586417 TMEM57Q8N5G2 664 aa26.03■■□□□ 1.76
ATG4D-204ENST00000586417 SBF2Q86WG5 1849 aa26.03■■□□□ 1.76
ATG4D-204ENST00000586417 BCL9O00512 1426 aa26.02■■□□□ 1.76
ATG4D-204ENST00000586417 CENPQQ7L2Z9 268 aaPredicted RBP26.02■■□□□ 1.76
ATG4D-204ENST00000586417 ABCC4O15439 1325 aa26■■□□□ 1.75
ATG4D-204ENST00000586417 SOS1Q07889 1333 aaPredicted RBP26■■□□□ 1.75
ATG4D-204ENST00000586417 ZNF790Q6PG37 636 aa26■■□□□ 1.75
ATG4D-204ENST00000586417 DDX19BQ9UMR2 479 aa26■■□□□ 1.75
ATG4D-204ENST00000586417 ITPRIPQ8IWB1 547 aa25.99■■□□□ 1.75
ATG4D-204ENST00000586417 ASAP1Q9ULH1 1129 aa25.99■■□□□ 1.75
ATG4D-204ENST00000586417 PAPPAQ13219 1627 aa25.99■■□□□ 1.75
ATG4D-204ENST00000586417 API5Q9BZZ5 524 aaKnown RBP25.97■■□□□ 1.75
ATG4D-204ENST00000586417 PCDHB15Q9Y5E8 787 aa25.97■■□□□ 1.75
ATG4D-204ENST00000586417 EIF4A1P60842 406 aaKnown RBP25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms