RNA–Protein interactions for RNA: ENST00000586250.1

TMEM259-203, Transcript of transmembrane protein 259, humanhuman

TSL 3

Gene TMEM259, Length 418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-203ENST00000586250 UBR3Q6ZT12 1888 aa17.62■□□□□ 0.41
TMEM259-203ENST00000586250 COL24A1Q17RW2 1714 aa17.61■□□□□ 0.41
TMEM259-203ENST00000586250 ZNF831Q5JPB2 1677 aa17.61■□□□□ 0.41
TMEM259-203ENST00000586250 COL5A3P25940 1745 aaPredicted RBP17.61■□□□□ 0.41
TMEM259-203ENST00000586250 AKAP4Q5JQC9 854 aa17.6■□□□□ 0.41
TMEM259-203ENST00000586250 AMIGO3Q86WK7 504 aa17.6■□□□□ 0.41
TMEM259-203ENST00000586250 SMARCC1Q92922 1105 aaPredicted RBP17.6■□□□□ 0.41
TMEM259-203ENST00000586250 SLC4A9Q96Q91 983 aa17.6■□□□□ 0.41
TMEM259-203ENST00000586250 PNNQ9H307 717 aaKnown RBP17.6■□□□□ 0.41
TMEM259-203ENST00000586250 LGR6Q9HBX8 967 aa17.6■□□□□ 0.41
TMEM259-203ENST00000586250 SIPA1L3O60292 1781 aaPredicted RBP17.6■□□□□ 0.41
TMEM259-203ENST00000586250 LOC102724428A0A0B4J2F2 783 aa17.59■□□□□ 0.41
TMEM259-203ENST00000586250 SIK1P57059 783 aa17.59■□□□□ 0.41
TMEM259-203ENST00000586250 ITPK1Q13572 414 aa17.59■□□□□ 0.41
TMEM259-203ENST00000586250 PHACTR3Q96KR7 559 aa17.59■□□□□ 0.41
TMEM259-203ENST00000586250 TJP1Q07157 1748 aa17.58■□□□□ 0.41
TMEM259-203ENST00000586250 PRKAR2BP31323 418 aa17.58■□□□□ 0.4
TMEM259-203ENST00000586250 PTGER2P43116 358 aa17.58■□□□□ 0.4
TMEM259-203ENST00000586250 WDR43Q15061 677 aaKnown RBP eCLIP17.58■□□□□ 0.4
TMEM259-203ENST00000586250 LINC00116Q8NCU8 138 aa17.58■□□□□ 0.4
TMEM259-203ENST00000586250 SPON1Q9HCB6 807 aa17.58■□□□□ 0.4
TMEM259-203ENST00000586250 CICQ96RK0 1608 aaPredicted RBP17.58■□□□□ 0.4
TMEM259-203ENST00000586250 RNMTO43148 476 aaKnown RBP17.57■□□□□ 0.4
TMEM259-203ENST00000586250 CABP4P57796 275 aa17.57■□□□□ 0.4
TMEM259-203ENST00000586250 NFATC2IPQ8NCF5 419 aa17.57■□□□□ 0.4
TMEM259-203ENST00000586250 SGIP1Q9BQI5 828 aa17.57■□□□□ 0.4
TMEM259-203ENST00000586250 ATF5Q9Y2D1 282 aaPredicted RBP17.57■□□□□ 0.4
TMEM259-203ENST00000586250 MYH14Q7Z406 1995 aaKnown RBP17.57■□□□□ 0.4
TMEM259-203ENST00000586250 U2AF1L5P0DN76 240 aaPredicted RBP17.56■□□□□ 0.4
TMEM259-203ENST00000586250 U2AF1Q01081 240 aaKnown RBP eCLIP17.56■□□□□ 0.4
TMEM259-203ENST00000586250 SMIM5Q71RC9 77 aa17.56■□□□□ 0.4
TMEM259-203ENST00000586250 TFCP2L1Q9NZI6 479 aa17.56■□□□□ 0.4
TMEM259-203ENST00000586250 UBR2Q8IWV8 1755 aa17.56■□□□□ 0.4
TMEM259-203ENST00000586250 MAP3K5Q99683 1374 aa17.55■□□□□ 0.4
TMEM259-203ENST00000586250 SLC52A2Q9HAB3 445 aa17.55■□□□□ 0.4
TMEM259-203ENST00000586250 KCPQ6ZWJ8 1503 aa17.55■□□□□ 0.4
TMEM259-203ENST00000586250 DLG5Q8TDM6 1919 aa17.55■□□□□ 0.4
TMEM259-203ENST00000586250 COL23A1Q86Y22 540 aaPredicted RBP17.54■□□□□ 0.4
TMEM259-203ENST00000586250 PNISRQ8TF01 805 aaKnown RBP17.54■□□□□ 0.4
TMEM259-203ENST00000586250 MTFR1LQ9H019 292 aa17.54■□□□□ 0.4
TMEM259-203ENST00000586250 FCHSD2O94868 740 aa17.53■□□□□ 0.4
TMEM259-203ENST00000586250 NEFMP07197 916 aa17.53■□□□□ 0.4
TMEM259-203ENST00000586250 ATP6V1AP38606 617 aa17.52■□□□□ 0.4
TMEM259-203ENST00000586250 IL17REQ8NFR9 667 aa17.52■□□□□ 0.4
TMEM259-203ENST00000586250 GAS2L2Q8NHY3 880 aa17.52■□□□□ 0.4
TMEM259-203ENST00000586250 PTCD1O75127 700 aaKnown RBP17.51■□□□□ 0.39
TMEM259-203ENST00000586250 SLC39A6Q13433 755 aa17.51■□□□□ 0.39
TMEM259-203ENST00000586250 RBM42Q9BTD8 480 aaKnown RBP17.51■□□□□ 0.39
TMEM259-203ENST00000586250 CEMIPQ8WUJ3 1361 aa17.51■□□□□ 0.39
TMEM259-203ENST00000586250 C4AP0C0L4 1744 aa17.5■□□□□ 0.39
TMEM259-203ENST00000586250 GNAT3A8MTJ3 354 aa17.5■□□□□ 0.39
TMEM259-203ENST00000586250 CCDC184Q52MB2 194 aa17.49■□□□□ 0.39
TMEM259-203ENST00000586250 AK7Q96M32 723 aa17.49■□□□□ 0.39
TMEM259-203ENST00000586250 PLEKHF1Q96S99 279 aa17.49■□□□□ 0.39
TMEM259-203ENST00000586250 PHF14O94880 888 aa17.48■□□□□ 0.39
TMEM259-203ENST00000586250 SLC16A10Q8TF71 515 aa17.48■□□□□ 0.39
TMEM259-203ENST00000586250 UTRNP46939 3433 aa17.47■□□□□ 0.39
TMEM259-203ENST00000586250 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.47■□□□□ 0.39
TMEM259-203ENST00000586250 GNPATO15228 680 aa17.47■□□□□ 0.39
TMEM259-203ENST00000586250 MSL1Q68DK7 614 aa17.47■□□□□ 0.39
TMEM259-203ENST00000586250 PPP1R1BQ9UD71 204 aaPredicted RBP17.47■□□□□ 0.39
TMEM259-203ENST00000586250 ADAMTS8Q9UP79 889 aa17.47■□□□□ 0.39
TMEM259-203ENST00000586250 GOLGB1Q14789 3259 aaKnown RBP17.46■□□□□ 0.39
TMEM259-203ENST00000586250 CNTNAP4Q9C0A0 1308 aa17.46■□□□□ 0.38
TMEM259-203ENST00000586250 MSH5O43196 834 aa17.45■□□□□ 0.38
TMEM259-203ENST00000586250 SSFA2P28290 1259 aa17.45■□□□□ 0.38
TMEM259-203ENST00000586250 DCTN1Q14203 1278 aa17.45■□□□□ 0.38
TMEM259-203ENST00000586250 MCM10Q7L590 875 aa17.45■□□□□ 0.38
TMEM259-203ENST00000586250 FAM9BQ8IZU0 186 aa17.45■□□□□ 0.38
TMEM259-203ENST00000586250 DNAJC10Q8IXB1 793 aa17.44■□□□□ 0.38
TMEM259-203ENST00000586250 NGEFQ8N5V2 710 aa17.44■□□□□ 0.38
TMEM259-203ENST00000586250 RUNDC1Q96C34 613 aa17.44■□□□□ 0.38
TMEM259-203ENST00000586250 MAPK8IP3Q9UPT6 1336 aa17.44■□□□□ 0.38
TMEM259-203ENST00000586250 KCNQ3O43525 872 aa17.43■□□□□ 0.38
TMEM259-203ENST00000586250 CRKLP46109 303 aaKnown RBP17.43■□□□□ 0.38
TMEM259-203ENST00000586250 RC3H1Q5TC82 1133 aaKnown RBP17.43■□□□□ 0.38
TMEM259-203ENST00000586250 ARXQ96QS3 562 aa17.43■□□□□ 0.38
TMEM259-203ENST00000586250 FHDC1Q9C0D6 1143 aaPredicted RBP17.43■□□□□ 0.38
TMEM259-203ENST00000586250 TEFQ10587 303 aa17.42■□□□□ 0.38
TMEM259-203ENST00000586250 NCBP3Q53F19 620 aaKnown RBP17.42■□□□□ 0.38
TMEM259-203ENST00000586250 FLAD1Q8NFF5 587 aa17.42■□□□□ 0.38
TMEM259-203ENST00000586250 KDM3BQ7LBC6 1761 aa17.41■□□□□ 0.38
TMEM259-203ENST00000586250 INTS5Q6P9B9 1019 aaKnown RBP17.41■□□□□ 0.38
TMEM259-203ENST00000586250 ZNF496Q96IT1 587 aaPredicted RBP17.41■□□□□ 0.38
TMEM259-203ENST00000586250 RPS6KA4O75676 772 aa17.4■□□□□ 0.38
TMEM259-203ENST00000586250 CYP19A1P11511 503 aaPredicted RBP17.4■□□□□ 0.38
TMEM259-203ENST00000586250 HMGB2P26583 209 aaKnown RBP17.4■□□□□ 0.38
TMEM259-203ENST00000586250 NFE2L2Q16236 605 aa17.4■□□□□ 0.38
TMEM259-203ENST00000586250 ZNF790Q6PG37 636 aa17.4■□□□□ 0.38
TMEM259-203ENST00000586250 SYT17Q9BSW7 474 aa17.4■□□□□ 0.38
TMEM259-203ENST00000586250 RTCBQ9Y3I0 505 aaKnown RBP17.4■□□□□ 0.38
TMEM259-203ENST00000586250 THUMPD2Q9BTF0 503 aaKnown RBP17.39■□□□□ 0.37
TMEM259-203ENST00000586250 HEG1Q9ULI3 1381 aa17.39■□□□□ 0.37
TMEM259-203ENST00000586250 HTATSF1O43719 755 aaKnown RBP17.38■□□□□ 0.37
TMEM259-203ENST00000586250 POLD1P28340 1107 aa17.38■□□□□ 0.37
TMEM259-203ENST00000586250 ARHGEF1Q92888 912 aaKnown RBP17.38■□□□□ 0.37
TMEM259-203ENST00000586250 BTBD11A6QL63 1104 aa17.37■□□□□ 0.37
TMEM259-203ENST00000586250 CCDC146Q8IYE0 955 aa17.37■□□□□ 0.37
TMEM259-203ENST00000586250 TTC5Q8N0Z6 440 aa17.37■□□□□ 0.37
TMEM259-203ENST00000586250 VSIG10Q8N0Z9 540 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms