RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 PDGFDQ9GZP0 370 aaPredicted RBP21.19■□□□□ 0.98
CSNK1D-223ENST00000584472 ZNF827Q17R98 1081 aa21.18■□□□□ 0.98
CSNK1D-223ENST00000584472 GAS2L2Q8NHY3 880 aa21.18■□□□□ 0.98
CSNK1D-223ENST00000584472 PIGBQ92521 554 aa21.18■□□□□ 0.98
CSNK1D-223ENST00000584472 ZBTB7AO95365 584 aa21.17■□□□□ 0.98
CSNK1D-223ENST00000584472 FAM9BQ8IZU0 186 aa21.17■□□□□ 0.98
CSNK1D-223ENST00000584472 SMARCC1Q92922 1105 aaPredicted RBP21.17■□□□□ 0.98
CSNK1D-223ENST00000584472 COL24A1Q17RW2 1714 aa21.17■□□□□ 0.98
CSNK1D-223ENST00000584472 VIRMAQ69YN4 1812 aaKnown RBP21.16■□□□□ 0.98
CSNK1D-223ENST00000584472 MRC1P22897 1456 aa21.16■□□□□ 0.98
CSNK1D-223ENST00000584472 PALLDQ8WX93 1383 aa21.16■□□□□ 0.98
CSNK1D-223ENST00000584472 MAP3K5Q99683 1374 aa21.16■□□□□ 0.98
CSNK1D-223ENST00000584472 PHACTR3Q96KR7 559 aa21.15■□□□□ 0.98
CSNK1D-223ENST00000584472 CCNL1Q9UK58 526 aaPredicted RBP21.15■□□□□ 0.98
CSNK1D-223ENST00000584472 CABP4P57796 275 aa21.14■□□□□ 0.97
CSNK1D-223ENST00000584472 PNNQ9H307 717 aaKnown RBP21.14■□□□□ 0.97
CSNK1D-223ENST00000584472 PLEKHF1Q96S99 279 aa21.13■□□□□ 0.97
CSNK1D-223ENST00000584472 PNPLA7Q6ZV29 1317 aa21.12■□□□□ 0.97
CSNK1D-223ENST00000584472 GNAT3A8MTJ3 354 aa21.12■□□□□ 0.97
CSNK1D-223ENST00000584472 C5P01031 1676 aa21.12■□□□□ 0.97
CSNK1D-223ENST00000584472 RNMTO43148 476 aaKnown RBP21.11■□□□□ 0.97
CSNK1D-223ENST00000584472 NEFMP07197 916 aa21.11■□□□□ 0.97
CSNK1D-223ENST00000584472 TFCP2L1Q9NZI6 479 aa21.11■□□□□ 0.97
CSNK1D-223ENST00000584472 ATF5Q9Y2D1 282 aaPredicted RBP21.11■□□□□ 0.97
CSNK1D-223ENST00000584472 TUBGCP6Q96RT7 1819 aa21.11■□□□□ 0.97
CSNK1D-223ENST00000584472 ZNF831Q5JPB2 1677 aa21.1■□□□□ 0.97
CSNK1D-223ENST00000584472 DCAF8L1A6NGE4 600 aa21.1■□□□□ 0.97
CSNK1D-223ENST00000584472 CCDC146Q8IYE0 955 aa21.1■□□□□ 0.97
CSNK1D-223ENST00000584472 RUNDC1Q96C34 613 aa21.1■□□□□ 0.97
CSNK1D-223ENST00000584472 SLC52A2Q9HAB3 445 aa21.1■□□□□ 0.97
CSNK1D-223ENST00000584472 LGR6Q9HBX8 967 aa21.1■□□□□ 0.97
CSNK1D-223ENST00000584472 ASAP1Q9ULH1 1129 aa21.1■□□□□ 0.97
CSNK1D-223ENST00000584472 NFATC2IPQ8NCF5 419 aa21.09■□□□□ 0.97
CSNK1D-223ENST00000584472 FLAD1Q8NFF5 587 aa21.09■□□□□ 0.97
CSNK1D-223ENST00000584472 ATG3Q9NT62 314 aa21.09■□□□□ 0.97
CSNK1D-223ENST00000584472 TAF1LQ8IZX4 1826 aa21.08■□□□□ 0.97
CSNK1D-223ENST00000584472 CEMIPQ8WUJ3 1361 aa21.08■□□□□ 0.96
CSNK1D-223ENST00000584472 DLG5Q8TDM6 1919 aa21.08■□□□□ 0.96
CSNK1D-223ENST00000584472 ARXQ96QS3 562 aa21.07■□□□□ 0.96
CSNK1D-223ENST00000584472 SIPA1L3O60292 1781 aaPredicted RBP21.07■□□□□ 0.96
CSNK1D-223ENST00000584472 MAPK8IP3Q9UPT6 1336 aa21.06■□□□□ 0.96
CSNK1D-223ENST00000584472 LOC102724428A0A0B4J2F2 783 aa21.06■□□□□ 0.96
CSNK1D-223ENST00000584472 HTATSF1O43719 755 aaKnown RBP21.06■□□□□ 0.96
CSNK1D-223ENST00000584472 SIK1P57059 783 aa21.06■□□□□ 0.96
CSNK1D-223ENST00000584472 SYT17Q9BSW7 474 aa21.06■□□□□ 0.96
CSNK1D-223ENST00000584472 KCNQ4P56696 695 aa21.05■□□□□ 0.96
CSNK1D-223ENST00000584472 IL17REQ8NFR9 667 aa21.05■□□□□ 0.96
CSNK1D-223ENST00000584472 FHDC1Q9C0D6 1143 aaPredicted RBP21.05■□□□□ 0.96
CSNK1D-223ENST00000584472 CICQ96RK0 1608 aaPredicted RBP21.04■□□□□ 0.96
CSNK1D-223ENST00000584472 POLD1P28340 1107 aa21.04■□□□□ 0.96
CSNK1D-223ENST00000584472 C4BP0C0L5 1744 aa21.04■□□□□ 0.96
CSNK1D-223ENST00000584472 TEFQ10587 303 aa21.03■□□□□ 0.96
CSNK1D-223ENST00000584472 NFE2L2Q16236 605 aa21.03■□□□□ 0.96
CSNK1D-223ENST00000584472 RTF1Q92541 710 aaKnown RBP21.03■□□□□ 0.96
CSNK1D-223ENST00000584472 APAF1O14727 1248 aa21.02■□□□□ 0.96
CSNK1D-223ENST00000584472 UBR2Q8IWV8 1755 aa21.01■□□□□ 0.95
CSNK1D-223ENST00000584472 ATP6V1AP38606 617 aa21■□□□□ 0.95
CSNK1D-223ENST00000584472 TMPOP42166 694 aaKnown RBP21■□□□□ 0.95
CSNK1D-223ENST00000584472 COL23A1Q86Y22 540 aaPredicted RBP21■□□□□ 0.95
CSNK1D-223ENST00000584472 COL5A3P25940 1745 aaPredicted RBP21■□□□□ 0.95
CSNK1D-223ENST00000584472 KCPQ6ZWJ8 1503 aa20.99■□□□□ 0.95
CSNK1D-223ENST00000584472 RBM42Q9BTD8 480 aaKnown RBP20.99■□□□□ 0.95
CSNK1D-223ENST00000584472 UTRNP46939 3433 aa20.99■□□□□ 0.95
CSNK1D-223ENST00000584472 UBR3Q6ZT12 1888 aa20.98■□□□□ 0.95
CSNK1D-223ENST00000584472 PTCD1O75127 700 aaKnown RBP20.98■□□□□ 0.95
CSNK1D-223ENST00000584472 SSFA2P28290 1259 aa20.98■□□□□ 0.95
CSNK1D-223ENST00000584472 ITPK1Q13572 414 aa20.98■□□□□ 0.95
CSNK1D-223ENST00000584472 MCM10Q7L590 875 aa20.98■□□□□ 0.95
CSNK1D-223ENST00000584472 SLC4A9Q96Q91 983 aa20.98■□□□□ 0.95
CSNK1D-223ENST00000584472 RRP7AQ9Y3A4 280 aaKnown RBP20.98■□□□□ 0.95
CSNK1D-223ENST00000584472 TJP1Q07157 1748 aa20.98■□□□□ 0.95
CSNK1D-223ENST00000584472 LINC00116Q8NCU8 138 aa20.97■□□□□ 0.95
CSNK1D-223ENST00000584472 AK7Q96M32 723 aa20.97■□□□□ 0.95
CSNK1D-223ENST00000584472 SENP3-EIF4A1A0A087X0R7 540 aa20.96■□□□□ 0.95
CSNK1D-223ENST00000584472 RIPK4P57078 832 aa20.96■□□□□ 0.95
CSNK1D-223ENST00000584472 LMOD3Q0VAK6 560 aa20.95■□□□□ 0.94
CSNK1D-223ENST00000584472 SLC39A6Q13433 755 aa20.95■□□□□ 0.94
CSNK1D-223ENST00000584472 NEUROD2Q15784 382 aa20.95■□□□□ 0.94
CSNK1D-223ENST00000584472 NCBP3Q53F19 620 aaKnown RBP20.95■□□□□ 0.94
CSNK1D-223ENST00000584472 ZNF790Q6PG37 636 aa20.95■□□□□ 0.94
CSNK1D-223ENST00000584472 TTC5Q8N0Z6 440 aa20.95■□□□□ 0.94
CSNK1D-223ENST00000584472 DCTN1Q14203 1278 aa20.94■□□□□ 0.94
CSNK1D-223ENST00000584472 VSIG10Q8N0Z9 540 aa20.94■□□□□ 0.94
CSNK1D-223ENST00000584472 BTBD11A6QL63 1104 aa20.93■□□□□ 0.94
CSNK1D-223ENST00000584472 YY1P25490 414 aa20.93■□□□□ 0.94
CSNK1D-223ENST00000584472 RC3H1Q5TC82 1133 aaKnown RBP20.93■□□□□ 0.94
CSNK1D-223ENST00000584472 CNTNAP4Q9C0A0 1308 aa20.93■□□□□ 0.94
CSNK1D-223ENST00000584472 TAF7Q15545 349 aaPredicted RBP20.92■□□□□ 0.94
CSNK1D-223ENST00000584472 NGEFQ8N5V2 710 aa20.92■□□□□ 0.94
CSNK1D-223ENST00000584472 TRIM35Q9UPQ4 493 aa20.92■□□□□ 0.94
CSNK1D-223ENST00000584472 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.91■□□□□ 0.94
CSNK1D-223ENST00000584472 MSH5O43196 834 aa20.91■□□□□ 0.94
CSNK1D-223ENST00000584472 HNRNPUQ00839 825 aaKnown RBP eCLIP20.91■□□□□ 0.943e-18■□□□□ 9.1
CSNK1D-223ENST00000584472 GOLGB1Q14789 3259 aaKnown RBP20.91■□□□□ 0.94
CSNK1D-223ENST00000584472 CCDC27Q2M243 656 aa20.91■□□□□ 0.94
CSNK1D-223ENST00000584472 SALL2Q9Y467 1007 aaPredicted RBP20.91■□□□□ 0.94
CSNK1D-223ENST00000584472 ADRA2BP18089 450 aa20.9■□□□□ 0.94
CSNK1D-223ENST00000584472 MYH14Q7Z406 1995 aaKnown RBP20.9■□□□□ 0.94
CSNK1D-223ENST00000584472 KDM3BQ7LBC6 1761 aa20.9■□□□□ 0.94
CSNK1D-223ENST00000584472 HEG1Q9ULI3 1381 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms