RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 USP54Q70EL1 1684 aa16.3■□□□□ 0.2
CSNK1D-222ENST00000584377 GOLGA6L3A6NEY3 463 aa16.3■□□□□ 0.2
CSNK1D-222ENST00000584377 CASC1Q6TDU7 716 aa16.3■□□□□ 0.2
CSNK1D-222ENST00000584377 ANKLE2Q86XL3 938 aa16.29■□□□□ 0.2
CSNK1D-222ENST00000584377 PANK2Q9BZ23 570 aa16.29■□□□□ 0.2
CSNK1D-222ENST00000584377 BABAM1Q9NWV8 329 aa16.29■□□□□ 0.2
CSNK1D-222ENST00000584377 SOS1Q07889 1333 aaPredicted RBP16.29■□□□□ 0.2
CSNK1D-222ENST00000584377 RBM33Q96EV2 1170 aaKnown RBP16.29■□□□□ 0.2
CSNK1D-222ENST00000584377 FSD2A1L4K1 749 aa16.28■□□□□ 0.2
CSNK1D-222ENST00000584377 DDX11L8A8MPP1 907 aa16.28■□□□□ 0.2
CSNK1D-222ENST00000584377 GNAI3P08754 354 aa16.28■□□□□ 0.2
CSNK1D-222ENST00000584377 TRAK2O60296 914 aa16.28■□□□□ 0.2
CSNK1D-222ENST00000584377 TRHP20396 242 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-222ENST00000584377 USP26Q9BXU7 913 aa16.28■□□□□ 0.2
CSNK1D-222ENST00000584377 RABEP1Q15276 862 aa16.27■□□□□ 0.2
CSNK1D-222ENST00000584377 IP6K1Q92551 441 aa16.27■□□□□ 0.2
CSNK1D-222ENST00000584377 FOXD4L1Q9NU39 408 aa16.27■□□□□ 0.2
CSNK1D-222ENST00000584377 TNPO1Q92973 898 aaKnown RBP16.27■□□□□ 0.19
CSNK1D-222ENST00000584377 EXOC6BQ9Y2D4 811 aa16.27■□□□□ 0.19
CSNK1D-222ENST00000584377 FAM208AQ9UK61 1670 aaKnown RBP16.26■□□□□ 0.19
CSNK1D-222ENST00000584377 RAB3GAP1Q15042 981 aa16.26■□□□□ 0.19
CSNK1D-222ENST00000584377 GZF1Q9H116 711 aaPredicted RBP16.26■□□□□ 0.19
CSNK1D-222ENST00000584377 OSBPL3Q9H4L5 887 aa16.26■□□□□ 0.19
CSNK1D-222ENST00000584377 PDE1AP54750 535 aa16.25■□□□□ 0.19
CSNK1D-222ENST00000584377 PSME1Q06323 249 aa16.25■□□□□ 0.19
CSNK1D-222ENST00000584377 ESCO1Q5FWF5 840 aa16.25■□□□□ 0.19
CSNK1D-222ENST00000584377 HDGFL1Q5TGJ6 251 aa16.25■□□□□ 0.19
CSNK1D-222ENST00000584377 NBPF6Q5VWK0 638 aa16.24■□□□□ 0.19
CSNK1D-222ENST00000584377 NBPF4Q96M43 638 aa16.24■□□□□ 0.19
CSNK1D-222ENST00000584377 GBP4Q96PP9 640 aa16.24■□□□□ 0.19
CSNK1D-222ENST00000584377 CHD2O14647 1828 aaKnown RBP16.24■□□□□ 0.19
CSNK1D-222ENST00000584377 PNMA6EA0A0J9YXQ4 647 aa16.24■□□□□ 0.19
CSNK1D-222ENST00000584377 ZBTB7CA1YPR0 619 aa16.24■□□□□ 0.19
CSNK1D-222ENST00000584377 REC8O95072 547 aa16.24■□□□□ 0.19
CSNK1D-222ENST00000584377 ATP8B2P98198 1209 aa16.24■□□□□ 0.19
CSNK1D-222ENST00000584377 LRRCC1Q9C099 1032 aa16.24■□□□□ 0.19
CSNK1D-222ENST00000584377 LTN1O94822 1766 aa16.23■□□□□ 0.19
CSNK1D-222ENST00000584377 KCNH5Q8NCM2 988 aa16.23■□□□□ 0.19
CSNK1D-222ENST00000584377 CEMIPQ8WUJ3 1361 aa16.23■□□□□ 0.19
CSNK1D-222ENST00000584377 LRRFIP2Q9Y608 721 aaKnown RBP16.23■□□□□ 0.19
CSNK1D-222ENST00000584377 NFAT5O94916 1531 aa16.23■□□□□ 0.19
CSNK1D-222ENST00000584377 ADGRL3Q9HAR2 1447 aa16.22■□□□□ 0.19
CSNK1D-222ENST00000584377 ERC2O15083 957 aa16.22■□□□□ 0.19
CSNK1D-222ENST00000584377 PXDNLA1KZ92 1463 aa16.22■□□□□ 0.19
CSNK1D-222ENST00000584377 USP44Q9H0E7 712 aa16.21■□□□□ 0.19
CSNK1D-222ENST00000584377 PHAXQ9H814 394 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-222ENST00000584377 CACNA1FO60840 1977 aa16.21■□□□□ 0.19
CSNK1D-222ENST00000584377 UBTFL1P0CB47 393 aaPredicted RBP16.21■□□□□ 0.19
CSNK1D-222ENST00000584377 TSHZ3Q63HK5 1081 aa16.21■□□□□ 0.19
CSNK1D-222ENST00000584377 IBTKQ9P2D0 1353 aaPredicted RBP16.21■□□□□ 0.18
CSNK1D-222ENST00000584377 ESPNB1AK53 854 aa16.2■□□□□ 0.18
CSNK1D-222ENST00000584377 PDCL3Q9H2J4 239 aa16.2■□□□□ 0.18
CSNK1D-222ENST00000584377 LGR6Q9HBX8 967 aa16.2■□□□□ 0.18
CSNK1D-222ENST00000584377 SALL3Q9BXA9 1300 aa16.2■□□□□ 0.18
CSNK1D-222ENST00000584377 EIF2S2P20042 333 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-222ENST00000584377 MX1P20591 662 aa16.2■□□□□ 0.18
CSNK1D-222ENST00000584377 EIF4A1P60842 406 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-222ENST00000584377 LRRC59Q96AG4 307 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-222ENST00000584377 ST18O60284 1047 aa16.18■□□□□ 0.18
CSNK1D-222ENST00000584377 SSFA2P28290 1259 aa16.18■□□□□ 0.18
CSNK1D-222ENST00000584377 MRE11P49959 708 aa16.18■□□□□ 0.18
CSNK1D-222ENST00000584377 ZNF530Q6P9A1 599 aaPredicted RBP16.18■□□□□ 0.18
CSNK1D-222ENST00000584377 SRCIN1Q9C0H9 1055 aa16.18■□□□□ 0.18
CSNK1D-222ENST00000584377 SETD1BQ9UPS6 1966 aaKnown RBP16.18■□□□□ 0.18
CSNK1D-222ENST00000584377 HOXB7P09629 217 aa16.17■□□□□ 0.18
CSNK1D-222ENST00000584377 TEFQ10587 303 aa16.17■□□□□ 0.18
CSNK1D-222ENST00000584377 ERBB4Q15303 1308 aa16.17■□□□□ 0.18
CSNK1D-222ENST00000584377 TPM2P07951 284 aa16.17■□□□□ 0.18
CSNK1D-222ENST00000584377 AKAP4Q5JQC9 854 aa16.17■□□□□ 0.18
CSNK1D-222ENST00000584377 ZNF142P52746 1687 aaPredicted RBP16.17■□□□□ 0.18
CSNK1D-222ENST00000584377 MED1Q15648 1581 aaPredicted RBP16.17■□□□□ 0.18
CSNK1D-222ENST00000584377 PTMSP20962 102 aa16.16■□□□□ 0.18
CSNK1D-222ENST00000584377 XPCQ01831 940 aaPredicted RBP16.16■□□□□ 0.18
CSNK1D-222ENST00000584377 PLEKHO1Q53GL0 409 aaPredicted RBP16.16■□□□□ 0.18
CSNK1D-222ENST00000584377 ORAI2Q96SN7 254 aa16.16■□□□□ 0.18
CSNK1D-222ENST00000584377 CHMP4AQ9BY43 222 aa16.16■□□□□ 0.18
CSNK1D-222ENST00000584377 CHPF2Q9P2E5 772 aa16.16■□□□□ 0.18
CSNK1D-222ENST00000584377 GCP02774 474 aa16.16■□□□□ 0.18
CSNK1D-222ENST00000584377 N4BP2Q86UW6 1770 aaPredicted RBP16.16■□□□□ 0.18
CSNK1D-222ENST00000584377 BTBD11A6QL63 1104 aa16.16■□□□□ 0.18
CSNK1D-222ENST00000584377 KCNQ3O43525 872 aa16.16■□□□□ 0.18
CSNK1D-222ENST00000584377 SSH3Q8TE77 659 aa16.16■□□□□ 0.18
CSNK1D-222ENST00000584377 TRIM6-TRIM34B2RNG4 842 aa16.15■□□□□ 0.18
CSNK1D-222ENST00000584377 SKOR2Q2VWA4 1001 aaPredicted RBP16.15■□□□□ 0.18
CSNK1D-222ENST00000584377 MPRIPQ6WCQ1 1025 aa16.15■□□□□ 0.18
CSNK1D-222ENST00000584377 RILPL2Q969X0 211 aa16.15■□□□□ 0.18
CSNK1D-222ENST00000584377 STAP2Q9UGK3 403 aa16.15■□□□□ 0.18
CSNK1D-222ENST00000584377 ESYT1Q9BSJ8 1104 aa16.15■□□□□ 0.18
CSNK1D-222ENST00000584377 AMOTQ4VCS5 1084 aa16.14■□□□□ 0.17
CSNK1D-222ENST00000584377 LMOD2Q6P5Q4 547 aa16.14■□□□□ 0.17
CSNK1D-222ENST00000584377 PPP1R42Q7Z4L9 355 aa16.14■□□□□ 0.17
CSNK1D-222ENST00000584377 ARHGEF25Q86VW2 580 aa16.14■□□□□ 0.17
CSNK1D-222ENST00000584377 PI4KAP2A4QPH2 592 aa16.14■□□□□ 0.17
CSNK1D-222ENST00000584377 GOLGA6L22H0YM25 854 aa16.14■□□□□ 0.17
CSNK1D-222ENST00000584377 CLEC17AQ6ZS10 378 aa16.14■□□□□ 0.17
CSNK1D-222ENST00000584377 PI4KAP1Q8N8J0 262 aa16.14■□□□□ 0.17
CSNK1D-222ENST00000584377 DNAAF4Q8WXU2 420 aa16.14■□□□□ 0.17
CSNK1D-222ENST00000584377 IL1RAPL2Q9NP60 686 aa16.14■□□□□ 0.17
CSNK1D-222ENST00000584377 NPHP4O75161 1426 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-222ENST00000584377 PHRF1Q9P1Y6 1649 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms