RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 LOC102724428A0A0B4J2F2 783 aa13.32□□□□□ -0.28
SKA2-208ENST00000583927 ZBTB7AO95365 584 aa13.32□□□□□ -0.28
SKA2-208ENST00000583927 PPP2R1AP30153 589 aa13.32□□□□□ -0.28
SKA2-208ENST00000583927 KCNQ4P56696 695 aa13.32□□□□□ -0.28
SKA2-208ENST00000583927 SIK1P57059 783 aa13.32□□□□□ -0.28
SKA2-208ENST00000583927 FLAD1Q8NFF5 587 aa13.32□□□□□ -0.28
SKA2-208ENST00000583927 ATG3Q9NT62 314 aa13.32□□□□□ -0.28
SKA2-208ENST00000583927 ASAP1Q9ULH1 1129 aa13.32□□□□□ -0.28
SKA2-208ENST00000583927 UBR2Q8IWV8 1755 aa13.32□□□□□ -0.28
SKA2-208ENST00000583927 HMOX1P09601 288 aa13.31□□□□□ -0.28
SKA2-208ENST00000583927 MAP3K5Q99683 1374 aa13.31□□□□□ -0.28
SKA2-208ENST00000583927 PPP1R1BQ9UD71 204 aaPredicted RBP13.3□□□□□ -0.28
SKA2-208ENST00000583927 DLG5Q8TDM6 1919 aa13.3□□□□□ -0.28
SKA2-208ENST00000583927 TJP1Q07157 1748 aa13.3□□□□□ -0.28
SKA2-208ENST00000583927 CABP4P57796 275 aa13.29□□□□□ -0.28
SKA2-208ENST00000583927 NUDCQ9Y266 331 aa13.29□□□□□ -0.28
SKA2-208ENST00000583927 ATF5Q9Y2D1 282 aaPredicted RBP13.29□□□□□ -0.28
SKA2-208ENST00000583927 SSFA2P28290 1259 aa13.28□□□□□ -0.28
SKA2-208ENST00000583927 MTHFSDQ2M296 383 aaKnown RBP13.28□□□□□ -0.28
SKA2-208ENST00000583927 NFATC2IPQ8NCF5 419 aa13.28□□□□□ -0.28
SKA2-208ENST00000583927 CHD4Q14839 1912 aa13.28□□□□□ -0.28
SKA2-208ENST00000583927 U2SURPO15042 1029 aaKnown RBP13.27□□□□□ -0.29
SKA2-208ENST00000583927 RNMTO43148 476 aaKnown RBP13.27□□□□□ -0.29
SKA2-208ENST00000583927 ZEB1P37275 1124 aaPredicted RBP13.27□□□□□ -0.29
SKA2-208ENST00000583927 ATP6V1AP38606 617 aa13.27□□□□□ -0.29
SKA2-208ENST00000583927 ITPK1Q13572 414 aa13.27□□□□□ -0.29
SKA2-208ENST00000583927 RC3H1Q5TC82 1133 aaKnown RBP13.27□□□□□ -0.29
SKA2-208ENST00000583927 COL23A1Q86Y22 540 aaPredicted RBP13.27□□□□□ -0.29
SKA2-208ENST00000583927 LINC00116Q8NCU8 138 aa13.27□□□□□ -0.29
SKA2-208ENST00000583927 GAS2L2Q8NHY3 880 aa13.27□□□□□ -0.29
SKA2-208ENST00000583927 AK7Q96M32 723 aa13.27□□□□□ -0.29
SKA2-208ENST00000583927 RSPH6AQ9H0K4 717 aa13.27□□□□□ -0.29
SKA2-208ENST00000583927 SLC52A2Q9HAB3 445 aa13.27□□□□□ -0.29
SKA2-208ENST00000583927 C4AP0C0L4 1744 aa13.27□□□□□ -0.29
SKA2-208ENST00000583927 FCHSD2O94868 740 aa13.26□□□□□ -0.29
SKA2-208ENST00000583927 CNGB1Q14028 1251 aaPredicted RBP13.26□□□□□ -0.29
SKA2-208ENST00000583927 SLC4A9Q96Q91 983 aa13.26□□□□□ -0.29
SKA2-208ENST00000583927 ARXQ96QS3 562 aa13.26□□□□□ -0.29
SKA2-208ENST00000583927 CNTNAP4Q9C0A0 1308 aa13.25□□□□□ -0.29
SKA2-208ENST00000583927 POLD1P28340 1107 aa13.25□□□□□ -0.29
SKA2-208ENST00000583927 RALBP1Q15311 655 aa13.25□□□□□ -0.29
SKA2-208ENST00000583927 LGR6Q9HBX8 967 aa13.25□□□□□ -0.29
SKA2-208ENST00000583927 KCPQ6ZWJ8 1503 aa13.24□□□□□ -0.29
SKA2-208ENST00000583927 CEMIPQ8WUJ3 1361 aa13.24□□□□□ -0.29
SKA2-208ENST00000583927 GNAT3A8MTJ3 354 aa13.24□□□□□ -0.29
SKA2-208ENST00000583927 SYT17Q9BSW7 474 aa13.24□□□□□ -0.29
SKA2-208ENST00000583927 KIF13BQ9NQT8 1826 aa13.24□□□□□ -0.29
SKA2-208ENST00000583927 RBM42Q9BTD8 480 aaKnown RBP13.23□□□□□ -0.29
SKA2-208ENST00000583927 FHDC1Q9C0D6 1143 aaPredicted RBP13.23□□□□□ -0.29
SKA2-208ENST00000583927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.22□□□□□ -0.29
SKA2-208ENST00000583927 U2AF1L5P0DN76 240 aaPredicted RBP13.22□□□□□ -0.29
SKA2-208ENST00000583927 PRKAR2BP31323 418 aa13.22□□□□□ -0.29
SKA2-208ENST00000583927 U2AF1Q01081 240 aaKnown RBP eCLIP13.22□□□□□ -0.291e-7■□□□□ 9.5
SKA2-208ENST00000583927 AMIGO3Q86WK7 504 aa13.22□□□□□ -0.29
SKA2-208ENST00000583927 VSIG10Q8N0Z9 540 aa13.22□□□□□ -0.29
SKA2-208ENST00000583927 PHACTR3Q96KR7 559 aa13.22□□□□□ -0.29
SKA2-208ENST00000583927 GNPATO15228 680 aa13.21□□□□□ -0.29
SKA2-208ENST00000583927 DDX10Q13206 875 aaKnown RBP13.21□□□□□ -0.29
SKA2-208ENST00000583927 IL17REQ8NFR9 667 aa13.21□□□□□ -0.29
SKA2-208ENST00000583927 RTCBQ9Y3I0 505 aaKnown RBP13.21□□□□□ -0.29
SKA2-208ENST00000583927 HTATSF1O43719 755 aaKnown RBP13.2□□□□□ -0.3
SKA2-208ENST00000583927 PTCD1O75127 700 aaKnown RBP13.2□□□□□ -0.3
SKA2-208ENST00000583927 RPS6KA4O75676 772 aa13.2□□□□□ -0.3
SKA2-208ENST00000583927 DCAF8L1A6NGE4 600 aa13.19□□□□□ -0.3
SKA2-208ENST00000583927 TEFQ10587 303 aa13.19□□□□□ -0.3
SKA2-208ENST00000583927 TRAPPC3LQ5T215 181 aa13.19□□□□□ -0.3
SKA2-208ENST00000583927 PNNQ9H307 717 aaKnown RBP13.19□□□□□ -0.3
SKA2-208ENST00000583927 CRKLP46109 303 aaKnown RBP13.18□□□□□ -0.3
SKA2-208ENST00000583927 PLEKHF1Q96S99 279 aa13.18□□□□□ -0.3
SKA2-208ENST00000583927 KDM3BQ7LBC6 1761 aa13.17□□□□□ -0.3
SKA2-208ENST00000583927 MYBBP1AQ9BQG0 1328 aaKnown RBP13.17□□□□□ -0.3
SKA2-208ENST00000583927 PHF14O94880 888 aa13.17□□□□□ -0.3
SKA2-208ENST00000583927 SLC39A6Q13433 755 aa13.17□□□□□ -0.3
SKA2-208ENST00000583927 ZNF790Q6PG37 636 aa13.17□□□□□ -0.3
SKA2-208ENST00000583927 ARHGEF1Q92888 912 aaKnown RBP13.17□□□□□ -0.3
SKA2-208ENST00000583927 CD2APQ9Y5K6 639 aa13.17□□□□□ -0.3
SKA2-208ENST00000583927 NEFMP07197 916 aa13.16□□□□□ -0.3
SKA2-208ENST00000583927 CYP19A1P11511 503 aaPredicted RBP13.16□□□□□ -0.3
SKA2-208ENST00000583927 INTS5Q6P9B9 1019 aaKnown RBP13.16□□□□□ -0.3
SKA2-208ENST00000583927 TTC5Q8N0Z6 440 aa13.16□□□□□ -0.3
SKA2-208ENST00000583927 NLGN1Q8N2Q7 840 aa13.16□□□□□ -0.3
SKA2-208ENST00000583927 TEX13AQ9BXU3 409 aaPredicted RBP13.16□□□□□ -0.3
SKA2-208ENST00000583927 BRCA1P38398 1863 aaKnown RBP13.16□□□□□ -0.3
SKA2-208ENST00000583927 KIAA1551Q9HCM1 1747 aa13.16□□□□□ -0.3
SKA2-208ENST00000583927 MSL1Q68DK7 614 aa13.15□□□□□ -0.3
SKA2-208ENST00000583927 SMIM5Q71RC9 77 aa13.15□□□□□ -0.3
SKA2-208ENST00000583927 DNAJC10Q8IXB1 793 aa13.15□□□□□ -0.3
SKA2-208ENST00000583927 RTF1Q92541 710 aaKnown RBP13.15□□□□□ -0.3
SKA2-208ENST00000583927 CCDC87Q9NVE4 849 aa13.15□□□□□ -0.3
SKA2-208ENST00000583927 HEG1Q9ULI3 1381 aa13.15□□□□□ -0.3
SKA2-208ENST00000583927 AFDNP55196 1824 aaKnown RBP13.15□□□□□ -0.3
SKA2-208ENST00000583927 LAMB4A4D0S4 1761 aa13.15□□□□□ -0.31
SKA2-208ENST00000583927 SOS1Q07889 1333 aaPredicted RBP13.14□□□□□ -0.31
SKA2-208ENST00000583927 GYS1P13807 737 aa13.14□□□□□ -0.31
SKA2-208ENST00000583927 RFC4P35249 363 aa13.14□□□□□ -0.31
SKA2-208ENST00000583927 ZNF496Q96IT1 587 aaPredicted RBP13.14□□□□□ -0.31
SKA2-208ENST00000583927 PRKRIP1Q9H875 184 aaPredicted RBP13.14□□□□□ -0.31
SKA2-208ENST00000583927 NRXN2Q9P2S2 1712 aa13.13□□□□□ -0.31
SKA2-208ENST00000583927 BTBD11A6QL63 1104 aa13.13□□□□□ -0.31
SKA2-208ENST00000583927 STARD3NLO95772 234 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms