RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 RSPH6AQ9H0K4 717 aa16.45■□□□□ 0.22
SRSF1-204ENST00000581979 NEFLP07196 543 aa16.45■□□□□ 0.22
SRSF1-204ENST00000581979 PRKAR2BP31323 418 aa16.45■□□□□ 0.22
SRSF1-204ENST00000581979 KCNQ4P56696 695 aa16.45■□□□□ 0.22
SRSF1-204ENST00000581979 CCNL1Q9UK58 526 aaPredicted RBP16.45■□□□□ 0.22
SRSF1-204ENST00000581979 TOGARAM1Q9Y4F4 1720 aa16.44■□□□□ 0.22
SRSF1-204ENST00000581979 IGSF1Q8N6C5 1336 aa16.44■□□□□ 0.22
SRSF1-204ENST00000581979 ITGB4P16144 1822 aa16.43■□□□□ 0.22
SRSF1-204ENST00000581979 NCBP3Q53F19 620 aaKnown RBP16.43■□□□□ 0.22
SRSF1-204ENST00000581979 SLC16A10Q8TF71 515 aa16.43■□□□□ 0.22
SRSF1-204ENST00000581979 PNPLA7Q6ZV29 1317 aa16.43■□□□□ 0.22
SRSF1-204ENST00000581979 CCDC27Q2M243 656 aa16.42■□□□□ 0.22
SRSF1-204ENST00000581979 MPRIPQ6WCQ1 1025 aa16.42■□□□□ 0.22
SRSF1-204ENST00000581979 WWC1Q8IX03 1113 aa16.42■□□□□ 0.22
SRSF1-204ENST00000581979 TMPOP42166 694 aaKnown RBP16.42■□□□□ 0.22
SRSF1-204ENST00000581979 TFCP2L1Q9NZI6 479 aa16.42■□□□□ 0.22
SRSF1-204ENST00000581979 TUBGCP6Q96RT7 1819 aa16.42■□□□□ 0.22
SRSF1-204ENST00000581979 HMGB2P26583 209 aaKnown RBP16.41■□□□□ 0.22
SRSF1-204ENST00000581979 SULT6B1Q6IMI4 303 aa16.41■□□□□ 0.22
SRSF1-204ENST00000581979 IFNL2Q8IZJ0 200 aa16.41■□□□□ 0.22
SRSF1-204ENST00000581979 PALLDQ8WX93 1383 aa16.41■□□□□ 0.22
SRSF1-204ENST00000581979 PHKG2P15735 406 aa16.4■□□□□ 0.22
SRSF1-204ENST00000581979 SLFN5Q08AF3 891 aa16.4■□□□□ 0.22
SRSF1-204ENST00000581979 SMARCC1Q92922 1105 aaPredicted RBP16.4■□□□□ 0.22
SRSF1-204ENST00000581979 COL24A1Q17RW2 1714 aa16.4■□□□□ 0.22
SRSF1-204ENST00000581979 E9PSI1 815 aa16.39■□□□□ 0.21
SRSF1-204ENST00000581979 PIGBQ92521 554 aa16.39■□□□□ 0.21
SRSF1-204ENST00000581979 RIPK4P57078 832 aa16.39■□□□□ 0.21
SRSF1-204ENST00000581979 WDR63Q8IWG1 891 aa16.39■□□□□ 0.21
SRSF1-204ENST00000581979 ARXQ96QS3 562 aa16.39■□□□□ 0.21
SRSF1-204ENST00000581979 FHDC1Q9C0D6 1143 aaPredicted RBP16.39■□□□□ 0.21
SRSF1-204ENST00000581979 C5P01031 1676 aa16.38■□□□□ 0.21
SRSF1-204ENST00000581979 TAF1LQ8IZX4 1826 aa16.38■□□□□ 0.21
SRSF1-204ENST00000581979 FKBP8Q14318 412 aa16.38■□□□□ 0.21
SRSF1-204ENST00000581979 DUSP27Q5VZP5 1158 aa16.38■□□□□ 0.21
SRSF1-204ENST00000581979 AEBP1Q8IUX7 1158 aa16.38■□□□□ 0.21
SRSF1-204ENST00000581979 SYT17Q9BSW7 474 aa16.38■□□□□ 0.21
SRSF1-204ENST00000581979 MAP3K5Q99683 1374 aa16.37■□□□□ 0.21
SRSF1-204ENST00000581979 NFE2L2Q16236 605 aa16.37■□□□□ 0.21
SRSF1-204ENST00000581979 PHACTR3Q96KR7 559 aa16.37■□□□□ 0.21
SRSF1-204ENST00000581979 DLG5Q8TDM6 1919 aa16.37■□□□□ 0.21
SRSF1-204ENST00000581979 DCAF8L1A6NGE4 600 aa16.36■□□□□ 0.21
SRSF1-204ENST00000581979 SPINK5Q9NQ38 1064 aaPredicted RBP16.36■□□□□ 0.21
SRSF1-204ENST00000581979 TRMT2AQ8IZ69 625 aaKnown RBP16.36■□□□□ 0.21
SRSF1-204ENST00000581979 TMOD3Q9NYL9 352 aa16.36■□□□□ 0.21
SRSF1-204ENST00000581979 RCAN3Q9UKA8 241 aa16.36■□□□□ 0.21
SRSF1-204ENST00000581979 KDRP35968 1356 aa16.35■□□□□ 0.21
SRSF1-204ENST00000581979 AMOTQ4VCS5 1084 aa16.35■□□□□ 0.21
SRSF1-204ENST00000581979 PLEKHO1Q53GL0 409 aaPredicted RBP16.35■□□□□ 0.21
SRSF1-204ENST00000581979 COL23A1Q86Y22 540 aaPredicted RBP16.35■□□□□ 0.21
SRSF1-204ENST00000581979 TRIM35Q9UPQ4 493 aa16.35■□□□□ 0.21
SRSF1-204ENST00000581979 POLD1P28340 1107 aa16.34■□□□□ 0.21
SRSF1-204ENST00000581979 HSP90AB1P08238 724 aaKnown RBP16.33■□□□□ 0.21
SRSF1-204ENST00000581979 C4BP0C0L5 1744 aa16.33■□□□□ 0.21
SRSF1-204ENST00000581979 LOC102724428A0A0B4J2F2 783 aa16.33■□□□□ 0.2
SRSF1-204ENST00000581979 ERVV-2B6SEH9 535 aa16.33■□□□□ 0.2
SRSF1-204ENST00000581979 SIK1P57059 783 aa16.33■□□□□ 0.2
SRSF1-204ENST00000581979 FLAD1Q8NFF5 587 aa16.33■□□□□ 0.2
SRSF1-204ENST00000581979 DCAF5Q96JK2 942 aa16.33■□□□□ 0.2
SRSF1-204ENST00000581979 ASAP1Q9ULH1 1129 aa16.33■□□□□ 0.2
SRSF1-204ENST00000581979 LMOD3Q0VAK6 560 aa16.32■□□□□ 0.2
SRSF1-204ENST00000581979 ATG3Q9NT62 314 aa16.32■□□□□ 0.2
SRSF1-204ENST00000581979 IRX6P78412 446 aaPredicted RBP16.31■□□□□ 0.2
SRSF1-204ENST00000581979 ZNF530Q6P9A1 599 aaPredicted RBP16.31■□□□□ 0.2
SRSF1-204ENST00000581979 MYH16Q9H6N6 1097 aa16.31■□□□□ 0.2
SRSF1-204ENST00000581979 KDM6AO15550 1401 aaPredicted RBP16.31■□□□□ 0.2
SRSF1-204ENST00000581979 IL16Q14005 1332 aa16.3■□□□□ 0.2
SRSF1-204ENST00000581979 RNF123Q5XPI4 1314 aa16.3■□□□□ 0.2
SRSF1-204ENST00000581979 MSH5O43196 834 aa16.3■□□□□ 0.2
SRSF1-204ENST00000581979 AK7Q96M32 723 aa16.3■□□□□ 0.2
SRSF1-204ENST00000581979 UBR3Q6ZT12 1888 aa16.29■□□□□ 0.2
SRSF1-204ENST00000581979 YY1P25490 414 aa16.29■□□□□ 0.2
SRSF1-204ENST00000581979 AMIGO3Q86WK7 504 aa16.29■□□□□ 0.2
SRSF1-204ENST00000581979 LINC00116Q8NCU8 138 aa16.29■□□□□ 0.2
SRSF1-204ENST00000581979 UTRNP46939 3433 aa16.28■□□□□ 0.2
SRSF1-204ENST00000581979 CALD1Q05682 793 aaKnown RBP16.28■□□□□ 0.2
SRSF1-204ENST00000581979 ITPK1Q13572 414 aa16.28■□□□□ 0.2
SRSF1-204ENST00000581979 C1orf141Q5JVX7 400 aa16.28■□□□□ 0.2
SRSF1-204ENST00000581979 ZNF831Q5JPB2 1677 aa16.28■□□□□ 0.2
SRSF1-204ENST00000581979 ATP6V1AP38606 617 aa16.28■□□□□ 0.2
SRSF1-204ENST00000581979 SSFA2P28290 1259 aa16.27■□□□□ 0.19
SRSF1-204ENST00000581979 RRP1P56182 461 aaKnown RBP16.27■□□□□ 0.19
SRSF1-204ENST00000581979 GAS2L2Q8NHY3 880 aa16.27■□□□□ 0.19
SRSF1-204ENST00000581979 CABP4P57796 275 aa16.26■□□□□ 0.19
SRSF1-204ENST00000581979 MTHFSDQ2M296 383 aaKnown RBP16.26■□□□□ 0.19
SRSF1-204ENST00000581979 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.25■□□□□ 0.19
SRSF1-204ENST00000581979 MSL1Q68DK7 614 aa16.25■□□□□ 0.19
SRSF1-204ENST00000581979 TSR2Q969E8 191 aaKnown RBP16.25■□□□□ 0.19
SRSF1-204ENST00000581979 SLC4A9Q96Q91 983 aa16.25■□□□□ 0.19
SRSF1-204ENST00000581979 THUMPD2Q9BTF0 503 aaKnown RBP16.25■□□□□ 0.19
SRSF1-204ENST00000581979 LAS1LQ9Y4W2 734 aaKnown RBP16.25■□□□□ 0.19
SRSF1-204ENST00000581979 FANCIQ9NVI1 1328 aa16.25■□□□□ 0.19
SRSF1-204ENST00000581979 AKAP4Q5JQC9 854 aa16.25■□□□□ 0.19
SRSF1-204ENST00000581979 PHF14O94880 888 aa16.24■□□□□ 0.19
SRSF1-204ENST00000581979 SCN11AQ9UI33 1791 aa16.24■□□□□ 0.19
SRSF1-204ENST00000581979 GNPATO15228 680 aa16.23■□□□□ 0.19
SRSF1-204ENST00000581979 DCTN1Q14203 1278 aa16.23■□□□□ 0.19
SRSF1-204ENST00000581979 SMIM5Q71RC9 77 aa16.23■□□□□ 0.19
SRSF1-204ENST00000581979 KLHL34Q8N239 644 aa16.23■□□□□ 0.19
SRSF1-204ENST00000581979 NFATC2IPQ8NCF5 419 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms