RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 RPGRIP1LQ68CZ1 1315 aa8.68□□□□□ -1.02
CMTM4-205ENST00000581487 NFE2L2Q16236 605 aa8.68□□□□□ -1.02
CMTM4-205ENST00000581487 CCDC172P0C7W6 258 aa8.67□□□□□ -1.02
CMTM4-205ENST00000581487 XRCC6P12956 609 aaKnown RBP eCLIP8.67□□□□□ -1.02
CMTM4-205ENST00000581487 PDCP20941 246 aa8.67□□□□□ -1.02
CMTM4-205ENST00000581487 SULT6B1Q6IMI4 303 aa8.67□□□□□ -1.02
CMTM4-205ENST00000581487 TXLNBQ8N3L3 684 aa8.67□□□□□ -1.02
CMTM4-205ENST00000581487 CDK19Q9BWU1 502 aa8.67□□□□□ -1.02
CMTM4-205ENST00000581487 DHX29Q7Z478 1369 aaKnown RBP8.67□□□□□ -1.02
CMTM4-205ENST00000581487 OLFM4Q6UX06 510 aa8.67□□□□□ -1.02
CMTM4-205ENST00000581487 TTC5Q8N0Z6 440 aa8.67□□□□□ -1.02
CMTM4-205ENST00000581487 CCDC192P0DO97 292 aa8.67□□□□□ -1.02
CMTM4-205ENST00000581487 LMAN1P49257 510 aa8.67□□□□□ -1.02
CMTM4-205ENST00000581487 LRRFIP1Q32MZ4 808 aaKnown RBP8.67□□□□□ -1.02
CMTM4-205ENST00000581487 LRSAM1Q6UWE0 723 aa8.67□□□□□ -1.02
CMTM4-205ENST00000581487 NAP1L3Q99457 506 aaPredicted RBP8.67□□□□□ -1.02
CMTM4-205ENST00000581487 THUMPD2Q9BTF0 503 aaKnown RBP8.67□□□□□ -1.02
CMTM4-205ENST00000581487 CCDC94Q9BW85 323 aaPredicted RBP8.67□□□□□ -1.02
CMTM4-205ENST00000581487 SERPINA10Q9UK55 444 aa8.67□□□□□ -1.02
CMTM4-205ENST00000581487 CCDC141Q6ZP82 1450 aa8.67□□□□□ -1.02
CMTM4-205ENST00000581487 BIRC2Q13490 618 aa8.67□□□□□ -1.02
CMTM4-205ENST00000581487 PAIP2Q9BPZ3 127 aaKnown RBP8.67□□□□□ -1.02
CMTM4-205ENST00000581487 SRRTQ9BXP5 876 aaKnown RBP8.67□□□□□ -1.02
CMTM4-205ENST00000581487 SNAPC4Q5SXM2 1469 aa8.67□□□□□ -1.02
CMTM4-205ENST00000581487 ERICH2A1L162 156 aa8.66□□□□□ -1.02
CMTM4-205ENST00000581487 IGSF3O75054 1194 aa8.66□□□□□ -1.02
CMTM4-205ENST00000581487 CCDC6Q16204 474 aa8.66□□□□□ -1.02
CMTM4-205ENST00000581487 UBXN4Q92575 508 aa8.66□□□□□ -1.02
CMTM4-205ENST00000581487 SDF4Q9BRK5 362 aa8.66□□□□□ -1.02
CMTM4-205ENST00000581487 ATAD2Q6PL18 1390 aa8.66□□□□□ -1.02
CMTM4-205ENST00000581487 CPSF2Q9P2I0 782 aaKnown RBP8.66□□□□□ -1.02
CMTM4-205ENST00000581487 NOC2LQ9Y3T9 749 aaKnown RBP8.66□□□□□ -1.02
CMTM4-205ENST00000581487 ABCC11Q96J66 1382 aa8.66□□□□□ -1.02
CMTM4-205ENST00000581487 PRC1O43663 620 aa8.66□□□□□ -1.02
CMTM4-205ENST00000581487 CLCN1P35523 988 aa8.66□□□□□ -1.02
CMTM4-205ENST00000581487 SMC6Q96SB8 1091 aa8.66□□□□□ -1.02
CMTM4-205ENST00000581487 CYP46A1Q9Y6A2 500 aa8.66□□□□□ -1.02
CMTM4-205ENST00000581487 CHMP4BP1P59074 171 aa8.66□□□□□ -1.02
CMTM4-205ENST00000581487 CCDC181Q5TID7 509 aa8.66□□□□□ -1.02
CMTM4-205ENST00000581487 ZSCAN31Q96LW9 406 aaPredicted RBP8.66□□□□□ -1.02
CMTM4-205ENST00000581487 BMP2KLQ5H9B9 411 aa8.66□□□□□ -1.02
CMTM4-205ENST00000581487 SRCIN1Q9C0H9 1055 aa8.66□□□□□ -1.02
CMTM4-205ENST00000581487 TMCO5BA8MYB1 307 aa8.65□□□□□ -1.02
CMTM4-205ENST00000581487 CCDC129Q6ZRS4 1044 aa8.65□□□□□ -1.02
CMTM4-205ENST00000581487 MIPOL1Q8TD10 442 aa8.65□□□□□ -1.02
CMTM4-205ENST00000581487 PCDHB15Q9Y5E8 787 aa8.65□□□□□ -1.02
CMTM4-205ENST00000581487 HOMEZQ8IX15 550 aa8.65□□□□□ -1.02
CMTM4-205ENST00000581487 TRIM35Q9UPQ4 493 aa8.65□□□□□ -1.02
CMTM4-205ENST00000581487 ARHGEF11O15085 1522 aa8.65□□□□□ -1.02
CMTM4-205ENST00000581487 ARL1P40616 181 aaPredicted RBP8.65□□□□□ -1.02
CMTM4-205ENST00000581487 SF3B2Q13435 895 aaKnown RBP8.65□□□□□ -1.02
CMTM4-205ENST00000581487 NLRP6P59044 892 aa8.65□□□□□ -1.03
CMTM4-205ENST00000581487 CPLX3Q8WVH0 158 aa8.65□□□□□ -1.03
CMTM4-205ENST00000581487 CFAP45Q9UL16 551 aa8.65□□□□□ -1.03
CMTM4-205ENST00000581487 MAGI1Q96QZ7 1491 aaPredicted RBP8.65□□□□□ -1.03
CMTM4-205ENST00000581487 PRDM2Q13029 1718 aa8.65□□□□□ -1.03
CMTM4-205ENST00000581487 ADGRF5Q8IZF2 1346 aa8.65□□□□□ -1.03
CMTM4-205ENST00000581487 LAMC3Q9Y6N6 1575 aa8.65□□□□□ -1.03
CMTM4-205ENST00000581487 BRD2P25440 801 aaKnown RBP8.65□□□□□ -1.03
CMTM4-205ENST00000581487 AIMP1Q12904 312 aaKnown RBP8.65□□□□□ -1.03
CMTM4-205ENST00000581487 CTR9Q6PD62 1173 aa8.65□□□□□ -1.03
CMTM4-205ENST00000581487 MICALCLQ6ZW33 695 aa8.65□□□□□ -1.03
CMTM4-205ENST00000581487 C10orf67Q8IYJ2 551 aa8.65□□□□□ -1.03
CMTM4-205ENST00000581487 RALGAPBQ86X10 1494 aa8.65□□□□□ -1.03
CMTM4-205ENST00000581487 KRT18P05783 430 aaKnown RBP8.64□□□□□ -1.03
CMTM4-205ENST00000581487 MAP2K1Q02750 393 aaPredicted RBP8.64□□□□□ -1.03
CMTM4-205ENST00000581487 KINO60870 393 aaKnown RBP8.64□□□□□ -1.03
CMTM4-205ENST00000581487 KRT85P78386 507 aa8.64□□□□□ -1.03
CMTM4-205ENST00000581487 CDK5RAP3Q96JB5 506 aa8.64□□□□□ -1.03
CMTM4-205ENST00000581487 NEUROD6Q96NK8 337 aa8.64□□□□□ -1.03
CMTM4-205ENST00000581487 RNF123Q5XPI4 1314 aa8.64□□□□□ -1.03
CMTM4-205ENST00000581487 PLB1Q6P1J6 1458 aa8.64□□□□□ -1.03
CMTM4-205ENST00000581487 HIP1O00291 1037 aa8.64□□□□□ -1.03
CMTM4-205ENST00000581487 CHMP2AO43633 222 aa8.64□□□□□ -1.03
CMTM4-205ENST00000581487 TRDNQ13061 729 aa8.64□□□□□ -1.03
CMTM4-205ENST00000581487 KLHL40Q2TBA0 621 aa8.64□□□□□ -1.03
CMTM4-205ENST00000581487 CEP135Q66GS9 1140 aa8.64□□□□□ -1.03
CMTM4-205ENST00000581487 NFXL1Q6ZNB6 911 aa8.64□□□□□ -1.03
CMTM4-205ENST00000581487 MAFGO15525 162 aa8.64□□□□□ -1.03
CMTM4-205ENST00000581487 SMARCA5O60264 1052 aaPredicted RBP8.64□□□□□ -1.03
CMTM4-205ENST00000581487 MAP4K4O95819 1239 aaPredicted RBP8.64□□□□□ -1.03
CMTM4-205ENST00000581487 IL1RAPL2Q9NP60 686 aa8.64□□□□□ -1.03
CMTM4-205ENST00000581487 FEZ2Q9UHY8 353 aaPredicted RBP8.64□□□□□ -1.03
CMTM4-205ENST00000581487 SCAF11Q99590 1463 aaKnown RBP8.64□□□□□ -1.03
CMTM4-205ENST00000581487 TPD52P55327 224 aaPredicted RBP8.64□□□□□ -1.03
CMTM4-205ENST00000581487 HDAC1Q13547 482 aaPredicted RBP8.64□□□□□ -1.03
CMTM4-205ENST00000581487 HDGFL1Q5TGJ6 251 aa8.64□□□□□ -1.03
CMTM4-205ENST00000581487 RIC3Q7Z5B4 369 aa8.64□□□□□ -1.03
CMTM4-205ENST00000581487 APBB1IPQ7Z5R6 666 aaPredicted RBP8.64□□□□□ -1.03
CMTM4-205ENST00000581487 KRT222Q8N1A0 295 aa8.64□□□□□ -1.03
CMTM4-205ENST00000581487 SMARCE1Q969G3 411 aa8.64□□□□□ -1.03
CMTM4-205ENST00000581487 UPF3BQ9BZI7 483 aaKnown RBP8.64□□□□□ -1.03
CMTM4-205ENST00000581487 TNMDQ9H2S6 317 aa8.64□□□□□ -1.03
CMTM4-205ENST00000581487 FAM69CQ0P6D2 419 aa8.63□□□□□ -1.03
CMTM4-205ENST00000581487 TMC2Q8TDI7 906 aa8.63□□□□□ -1.03
CMTM4-205ENST00000581487 FMNL2Q96PY5 1086 aa8.63□□□□□ -1.03
CMTM4-205ENST00000581487 PANK2Q9BZ23 570 aa8.63□□□□□ -1.03
CMTM4-205ENST00000581487 NUTM2GQ5VZR2 741 aa8.63□□□□□ -1.03
CMTM4-205ENST00000581487 TBC1D9Q6ZT07 1266 aa8.63□□□□□ -1.03
CMTM4-205ENST00000581487 SCLT1Q96NL6 688 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms