RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 DDX10Q13206 875 aaKnown RBP16.95■□□□□ 0.3
CBX1-206ENST00000581003 MSL1Q68DK7 614 aa16.95■□□□□ 0.3
CBX1-206ENST00000581003 NFATC2IPQ8NCF5 419 aa16.95■□□□□ 0.3
CBX1-206ENST00000581003 ADAMTS7Q9UKP4 1686 aa16.94■□□□□ 0.3
CBX1-206ENST00000581003 MRC1P22897 1456 aa16.94■□□□□ 0.3
CBX1-206ENST00000581003 MSH5O43196 834 aa16.94■□□□□ 0.3
CBX1-206ENST00000581003 PHF14O94880 888 aa16.94■□□□□ 0.3
CBX1-206ENST00000581003 HSP90AB1P08238 724 aaKnown RBP16.94■□□□□ 0.3
CBX1-206ENST00000581003 ATP6V1AP38606 617 aa16.93■□□□□ 0.3
CBX1-206ENST00000581003 AKAP4Q5JQC9 854 aa16.93■□□□□ 0.3
CBX1-206ENST00000581003 PHACTR3Q96KR7 559 aa16.93■□□□□ 0.3
CBX1-206ENST00000581003 RBM42Q9BTD8 480 aaKnown RBP16.93■□□□□ 0.3
CBX1-206ENST00000581003 COL24A1Q17RW2 1714 aa16.93■□□□□ 0.3
CBX1-206ENST00000581003 UBR3Q6ZT12 1888 aa16.93■□□□□ 0.3
CBX1-206ENST00000581003 PTCD1O75127 700 aaKnown RBP16.92■□□□□ 0.3
CBX1-206ENST00000581003 PRKAR2BP31323 418 aa16.92■□□□□ 0.3
CBX1-206ENST00000581003 RSPH6AQ9H0K4 717 aa16.92■□□□□ 0.3
CBX1-206ENST00000581003 COL5A3P25940 1745 aaPredicted RBP16.92■□□□□ 0.3
CBX1-206ENST00000581003 TJP1Q07157 1748 aa16.92■□□□□ 0.3
CBX1-206ENST00000581003 VIRMAQ69YN4 1812 aaKnown RBP16.91■□□□□ 0.3
CBX1-206ENST00000581003 RNMTO43148 476 aaKnown RBP16.91■□□□□ 0.3
CBX1-206ENST00000581003 AK7Q96M32 723 aa16.91■□□□□ 0.3
CBX1-206ENST00000581003 CFAP53Q96M91 514 aa16.91■□□□□ 0.3
CBX1-206ENST00000581003 FHDC1Q9C0D6 1143 aaPredicted RBP16.91■□□□□ 0.3
CBX1-206ENST00000581003 SLC39A6Q13433 755 aa16.9■□□□□ 0.3
CBX1-206ENST00000581003 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.89■□□□□ 0.29
CBX1-206ENST00000581003 GNPATO15228 680 aa16.89■□□□□ 0.29
CBX1-206ENST00000581003 U2AF1L5P0DN76 240 aaPredicted RBP16.89■□□□□ 0.29
CBX1-206ENST00000581003 U2AF1Q01081 240 aaKnown RBP eCLIP16.89■□□□□ 0.29
CBX1-206ENST00000581003 ARXQ96QS3 562 aa16.89■□□□□ 0.29
CBX1-206ENST00000581003 SLC52A2Q9HAB3 445 aa16.89■□□□□ 0.29
CBX1-206ENST00000581003 KCPQ6ZWJ8 1503 aa16.89■□□□□ 0.29
CBX1-206ENST00000581003 MAP3K5Q99683 1374 aa16.89■□□□□ 0.29
CBX1-206ENST00000581003 ZNF831Q5JPB2 1677 aa16.88■□□□□ 0.29
CBX1-206ENST00000581003 KLHL34Q8N239 644 aa16.87■□□□□ 0.29
CBX1-206ENST00000581003 IL17REQ8NFR9 667 aa16.87■□□□□ 0.29
CBX1-206ENST00000581003 SLC16A10Q8TF71 515 aa16.86■□□□□ 0.29
CBX1-206ENST00000581003 SYT17Q9BSW7 474 aa16.86■□□□□ 0.29
CBX1-206ENST00000581003 CICQ96RK0 1608 aaPredicted RBP16.85■□□□□ 0.29
CBX1-206ENST00000581003 SIPA1L3O60292 1781 aaPredicted RBP16.84■□□□□ 0.29
CBX1-206ENST00000581003 NLGN2Q8NFZ4 835 aa16.84■□□□□ 0.29
CBX1-206ENST00000581003 NUDCQ9Y266 331 aa16.84■□□□□ 0.29
CBX1-206ENST00000581003 GNAT3A8MTJ3 354 aa16.83■□□□□ 0.28
CBX1-206ENST00000581003 C4AP0C0L4 1744 aa16.83■□□□□ 0.28
CBX1-206ENST00000581003 SSFA2P28290 1259 aa16.83■□□□□ 0.28
CBX1-206ENST00000581003 MYH14Q7Z406 1995 aaKnown RBP16.83■□□□□ 0.28
CBX1-206ENST00000581003 UBR2Q8IWV8 1755 aa16.83■□□□□ 0.28
CBX1-206ENST00000581003 DNAJC10Q8IXB1 793 aa16.83■□□□□ 0.28
CBX1-206ENST00000581003 GAS2L2Q8NHY3 880 aa16.83■□□□□ 0.28
CBX1-206ENST00000581003 CNTNAP4Q9C0A0 1308 aa16.82■□□□□ 0.28
CBX1-206ENST00000581003 POLD1P28340 1107 aa16.82■□□□□ 0.28
CBX1-206ENST00000581003 DCTN1Q14203 1278 aa16.82■□□□□ 0.28
CBX1-206ENST00000581003 MCM10Q7L590 875 aa16.82■□□□□ 0.28
CBX1-206ENST00000581003 CEMIPQ8WUJ3 1361 aa16.81■□□□□ 0.28
CBX1-206ENST00000581003 KCNQ3O43525 872 aa16.81■□□□□ 0.28
CBX1-206ENST00000581003 CRKLP46109 303 aaKnown RBP16.81■□□□□ 0.28
CBX1-206ENST00000581003 FCHSD2O94868 740 aa16.8■□□□□ 0.28
CBX1-206ENST00000581003 INTS5Q6P9B9 1019 aaKnown RBP16.8■□□□□ 0.28
CBX1-206ENST00000581003 FLAD1Q8NFF5 587 aa16.8■□□□□ 0.28
CBX1-206ENST00000581003 UTRNP46939 3433 aa16.79■□□□□ 0.28
CBX1-206ENST00000581003 ARHGEF1Q92888 912 aaKnown RBP16.79■□□□□ 0.28
CBX1-206ENST00000581003 PLEKHF1Q96S99 279 aa16.79■□□□□ 0.28
CBX1-206ENST00000581003 SRP68Q9UHB9 627 aaKnown RBP16.79■□□□□ 0.28
CBX1-206ENST00000581003 RTCBQ9Y3I0 505 aaKnown RBP16.79■□□□□ 0.28
CBX1-206ENST00000581003 TEFQ10587 303 aa16.78■□□□□ 0.28
CBX1-206ENST00000581003 RALBP1Q15311 655 aa16.78■□□□□ 0.28
CBX1-206ENST00000581003 RC3H1Q5TC82 1133 aaKnown RBP16.78■□□□□ 0.28
CBX1-206ENST00000581003 ZNF496Q96IT1 587 aaPredicted RBP16.78■□□□□ 0.28
CBX1-206ENST00000581003 RPS6KA4O75676 772 aa16.77■□□□□ 0.28
CBX1-206ENST00000581003 CYP19A1P11511 503 aaPredicted RBP16.77■□□□□ 0.28
CBX1-206ENST00000581003 TRAPPC3LQ5T215 181 aa16.77■□□□□ 0.28
CBX1-206ENST00000581003 MYBBP1AQ9BQG0 1328 aaKnown RBP16.76■□□□□ 0.27
CBX1-206ENST00000581003 THUMPD2Q9BTF0 503 aaKnown RBP16.76■□□□□ 0.27
CBX1-206ENST00000581003 WWC3Q9ULE0 1092 aa16.76■□□□□ 0.27
CBX1-206ENST00000581003 ZBTB1Q9Y2K1 713 aa16.76■□□□□ 0.27
CBX1-206ENST00000581003 GOLGB1Q14789 3259 aaKnown RBP16.75■□□□□ 0.27
CBX1-206ENST00000581003 GYS1P13807 737 aa16.75■□□□□ 0.27
CBX1-206ENST00000581003 ZNF790Q6PG37 636 aa16.75■□□□□ 0.27
CBX1-206ENST00000581003 CCDC87Q9NVE4 849 aa16.75■□□□□ 0.27
CBX1-206ENST00000581003 DLG5Q8TDM6 1919 aa16.74■□□□□ 0.27
CBX1-206ENST00000581003 PRAMEF22A3QJZ6 481 aa16.74■□□□□ 0.27
CBX1-206ENST00000581003 MMP10P09238 476 aa16.74■□□□□ 0.27
CBX1-206ENST00000581003 ZEB1P37275 1124 aaPredicted RBP16.74■□□□□ 0.27
CBX1-206ENST00000581003 TTC5Q8N0Z6 440 aa16.74■□□□□ 0.27
CBX1-206ENST00000581003 HEG1Q9ULI3 1381 aa16.74■□□□□ 0.27
CBX1-206ENST00000581003 SOS1Q07889 1333 aaPredicted RBP16.73■□□□□ 0.27
CBX1-206ENST00000581003 BTBD11A6QL63 1104 aa16.73■□□□□ 0.27
CBX1-206ENST00000581003 PELP1Q8IZL8 1130 aaKnown RBP16.73■□□□□ 0.27
CBX1-206ENST00000581003 PRKRIP1Q9H875 184 aaPredicted RBP16.73■□□□□ 0.27
CBX1-206ENST00000581003 MIS18AQ9NYP9 233 aa16.73■□□□□ 0.27
CBX1-206ENST00000581003 USP42Q9H9J4 1324 aaKnown RBP16.72■□□□□ 0.27
CBX1-206ENST00000581003 HMGB2P26583 209 aaKnown RBP16.72■□□□□ 0.27
CBX1-206ENST00000581003 RFC4P35249 363 aa16.72■□□□□ 0.27
CBX1-206ENST00000581003 FKBP8Q14318 412 aa16.72■□□□□ 0.27
CBX1-206ENST00000581003 CCDC146Q8IYE0 955 aa16.72■□□□□ 0.27
CBX1-206ENST00000581003 RTF1Q92541 710 aaKnown RBP16.72■□□□□ 0.27
CBX1-206ENST00000581003 YBX3P16989 372 aaKnown RBP eCLIP16.71■□□□□ 0.27
CBX1-206ENST00000581003 ADRA2BP18089 450 aa16.71■□□□□ 0.27
CBX1-206ENST00000581003 CANXP27824 592 aaKnown RBP16.71■□□□□ 0.27
CBX1-206ENST00000581003 PIP4K2AP48426 406 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms