RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 SLC52A2Q9HAB3 445 aa17.69■□□□□ 0.42
NUP85-215ENST00000580879 CASZ1Q86V15 1759 aa17.68■□□□□ 0.42
NUP85-215ENST00000580879 ATP6V1AP38606 617 aa17.68■□□□□ 0.42
NUP85-215ENST00000580879 ITPK1Q13572 414 aa17.68■□□□□ 0.42
NUP85-215ENST00000580879 SCN11AQ9UI33 1791 aa17.68■□□□□ 0.42
NUP85-215ENST00000580879 LRP5O75197 1615 aa17.68■□□□□ 0.42
NUP85-215ENST00000580879 PNPLA7Q6ZV29 1317 aa17.68■□□□□ 0.42
NUP85-215ENST00000580879 GNAT3A8MTJ3 354 aa17.67■□□□□ 0.42
NUP85-215ENST00000580879 PTCD1O75127 700 aaKnown RBP17.67■□□□□ 0.42
NUP85-215ENST00000580879 LINC00116Q8NCU8 138 aa17.67■□□□□ 0.42
NUP85-215ENST00000580879 SLC4A9Q96Q91 983 aa17.67■□□□□ 0.42
NUP85-215ENST00000580879 ATF5Q9Y2D1 282 aaPredicted RBP17.67■□□□□ 0.42
NUP85-215ENST00000580879 C5P01031 1676 aa17.67■□□□□ 0.42
NUP85-215ENST00000580879 IL17REQ8NFR9 667 aa17.66■□□□□ 0.42
NUP85-215ENST00000580879 SPON1Q9HCB6 807 aa17.66■□□□□ 0.42
NUP85-215ENST00000580879 MRC1P22897 1456 aa17.65■□□□□ 0.42
NUP85-215ENST00000580879 SLC39A6Q13433 755 aa17.65■□□□□ 0.42
NUP85-215ENST00000580879 SMIM5Q71RC9 77 aa17.65■□□□□ 0.42
NUP85-215ENST00000580879 TUBGCP6Q96RT7 1819 aa17.64■□□□□ 0.41
NUP85-215ENST00000580879 AK7Q96M32 723 aa17.64■□□□□ 0.41
NUP85-215ENST00000580879 TAF1LQ8IZX4 1826 aa17.63■□□□□ 0.41
NUP85-215ENST00000580879 MSH5O43196 834 aa17.63■□□□□ 0.41
NUP85-215ENST00000580879 AMIGO3Q86WK7 504 aa17.63■□□□□ 0.41
NUP85-215ENST00000580879 ADAMTS7Q9UKP4 1686 aa17.63■□□□□ 0.41
NUP85-215ENST00000580879 C4BP0C0L5 1744 aa17.63■□□□□ 0.41
NUP85-215ENST00000580879 PHF14O94880 888 aa17.62■□□□□ 0.41
NUP85-215ENST00000580879 TEFQ10587 303 aa17.62■□□□□ 0.41
NUP85-215ENST00000580879 MCM10Q7L590 875 aa17.62■□□□□ 0.41
NUP85-215ENST00000580879 COL23A1Q86Y22 540 aaPredicted RBP17.62■□□□□ 0.41
NUP85-215ENST00000580879 PLEKHF1Q96S99 279 aa17.62■□□□□ 0.41
NUP85-215ENST00000580879 MTFR1LQ9H019 292 aa17.62■□□□□ 0.41
NUP85-215ENST00000580879 VIRMAQ69YN4 1812 aaKnown RBP17.62■□□□□ 0.41
NUP85-215ENST00000580879 NEFMP07197 916 aa17.61■□□□□ 0.41
NUP85-215ENST00000580879 DCTN1Q14203 1278 aa17.61■□□□□ 0.41
NUP85-215ENST00000580879 PPP1R1BQ9UD71 204 aaPredicted RBP17.61■□□□□ 0.41
NUP85-215ENST00000580879 GNPATO15228 680 aa17.6■□□□□ 0.41
NUP85-215ENST00000580879 PTGER2P43116 358 aa17.6■□□□□ 0.41
NUP85-215ENST00000580879 RTF1Q92541 710 aaKnown RBP17.6■□□□□ 0.41
NUP85-215ENST00000580879 QSER1Q2KHR3 1735 aa17.59■□□□□ 0.41
NUP85-215ENST00000580879 CEMIPQ8WUJ3 1361 aa17.59■□□□□ 0.41
NUP85-215ENST00000580879 MAPK8IP3Q9UPT6 1336 aa17.59■□□□□ 0.41
NUP85-215ENST00000580879 HMGB2P26583 209 aaKnown RBP17.59■□□□□ 0.41
NUP85-215ENST00000580879 WDR43Q15061 677 aaKnown RBP eCLIP17.59■□□□□ 0.41
NUP85-215ENST00000580879 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.58■□□□□ 0.4
NUP85-215ENST00000580879 CCDC146Q8IYE0 955 aa17.58■□□□□ 0.4
NUP85-215ENST00000580879 PNNQ9H307 717 aaKnown RBP17.58■□□□□ 0.4
NUP85-215ENST00000580879 NFE2L2Q16236 605 aa17.57■□□□□ 0.4
NUP85-215ENST00000580879 MSL1Q68DK7 614 aa17.57■□□□□ 0.4
NUP85-215ENST00000580879 DNAJC10Q8IXB1 793 aa17.57■□□□□ 0.4
NUP85-215ENST00000580879 TTC5Q8N0Z6 440 aa17.57■□□□□ 0.4
NUP85-215ENST00000580879 KCPQ6ZWJ8 1503 aa17.57■□□□□ 0.4
NUP85-215ENST00000580879 CCDC184Q52MB2 194 aa17.56■□□□□ 0.4
NUP85-215ENST00000580879 FLAD1Q8NFF5 587 aa17.56■□□□□ 0.4
NUP85-215ENST00000580879 SLC16A10Q8TF71 515 aa17.56■□□□□ 0.4
NUP85-215ENST00000580879 SGIP1Q9BQI5 828 aa17.56■□□□□ 0.4
NUP85-215ENST00000580879 CNTNAP4Q9C0A0 1308 aa17.55■□□□□ 0.4
NUP85-215ENST00000580879 UBR3Q6ZT12 1888 aa17.55■□□□□ 0.4
NUP85-215ENST00000580879 BTBD11A6QL63 1104 aa17.55■□□□□ 0.4
NUP85-215ENST00000580879 KCNQ3O43525 872 aa17.55■□□□□ 0.4
NUP85-215ENST00000580879 HTATSF1O43719 755 aaKnown RBP17.55■□□□□ 0.4
NUP85-215ENST00000580879 SSFA2P28290 1259 aa17.55■□□□□ 0.4
NUP85-215ENST00000580879 CRKLP46109 303 aaKnown RBP17.55■□□□□ 0.4
NUP85-215ENST00000580879 ZNF790Q6PG37 636 aa17.55■□□□□ 0.4
NUP85-215ENST00000580879 THUMPD2Q9BTF0 503 aaKnown RBP17.55■□□□□ 0.4
NUP85-215ENST00000580879 ADAMTS8Q9UP79 889 aa17.55■□□□□ 0.4
NUP85-215ENST00000580879 TJP1Q07157 1748 aa17.55■□□□□ 0.4
NUP85-215ENST00000580879 ZNF831Q5JPB2 1677 aa17.55■□□□□ 0.4
NUP85-215ENST00000580879 ANP32CO43423 234 aa17.54■□□□□ 0.4
NUP85-215ENST00000580879 ZNF496Q96IT1 587 aaPredicted RBP17.54■□□□□ 0.4
NUP85-215ENST00000580879 RRP7AQ9Y3A4 280 aaKnown RBP17.54■□□□□ 0.4
NUP85-215ENST00000580879 RTCBQ9Y3I0 505 aaKnown RBP17.54■□□□□ 0.4
NUP85-215ENST00000580879 COL5A3P25940 1745 aaPredicted RBP17.54■□□□□ 0.4
NUP85-215ENST00000580879 SIPA1L3O60292 1781 aaPredicted RBP17.53■□□□□ 0.4
NUP85-215ENST00000580879 RC3H1Q5TC82 1133 aaKnown RBP17.53■□□□□ 0.4
NUP85-215ENST00000580879 RPS6KA4O75676 772 aa17.52■□□□□ 0.4
NUP85-215ENST00000580879 POLD1P28340 1107 aa17.52■□□□□ 0.4
NUP85-215ENST00000580879 RIPK4P57078 832 aa17.52■□□□□ 0.4
NUP85-215ENST00000580879 ARXQ96QS3 562 aa17.52■□□□□ 0.4
NUP85-215ENST00000580879 MIS18AQ9NYP9 233 aa17.52■□□□□ 0.4
NUP85-215ENST00000580879 MYH14Q7Z406 1995 aaKnown RBP17.51■□□□□ 0.39
NUP85-215ENST00000580879 DLG5Q8TDM6 1919 aa17.51■□□□□ 0.39
NUP85-215ENST00000580879 CYP19A1P11511 503 aaPredicted RBP17.51■□□□□ 0.39
NUP85-215ENST00000580879 TMPOP42166 694 aaKnown RBP17.51■□□□□ 0.39
NUP85-215ENST00000580879 NEUROD2Q15784 382 aa17.51■□□□□ 0.39
NUP85-215ENST00000580879 TRAPPC3LQ5T215 181 aa17.51■□□□□ 0.39
NUP85-215ENST00000580879 INTS5Q6P9B9 1019 aaKnown RBP17.51■□□□□ 0.39
NUP85-215ENST00000580879 RUNDC1Q96C34 613 aa17.51■□□□□ 0.39
NUP85-215ENST00000580879 UBR2Q8IWV8 1755 aa17.51■□□□□ 0.39
NUP85-215ENST00000580879 TAF7Q15545 349 aaPredicted RBP17.5■□□□□ 0.39
NUP85-215ENST00000580879 VSIG10Q8N0Z9 540 aa17.5■□□□□ 0.39
NUP85-215ENST00000580879 KLHL34Q8N239 644 aa17.5■□□□□ 0.39
NUP85-215ENST00000580879 ARHGEF1Q92888 912 aaKnown RBP17.5■□□□□ 0.39
NUP85-215ENST00000580879 FMNL2Q96PY5 1086 aa17.5■□□□□ 0.39
NUP85-215ENST00000580879 FHDC1Q9C0D6 1143 aaPredicted RBP17.5■□□□□ 0.39
NUP85-215ENST00000580879 CCDC87Q9NVE4 849 aa17.5■□□□□ 0.39
NUP85-215ENST00000580879 HEG1Q9ULI3 1381 aa17.5■□□□□ 0.39
NUP85-215ENST00000580879 ZBTB1Q9Y2K1 713 aa17.49■□□□□ 0.39
NUP85-215ENST00000580879 CICQ96RK0 1608 aaPredicted RBP17.49■□□□□ 0.39
NUP85-215ENST00000580879 PRAMEF22A3QJZ6 481 aa17.47■□□□□ 0.39
NUP85-215ENST00000580879 ADRA2BP18089 450 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms