RNA–Protein interactions for RNA: ENST00000579611.1

CDC42EP4-204, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-204ENST00000579611 SSFA2P28290 1259 aa22.84■■□□□ 1.25
CDC42EP4-204ENST00000579611 NFATC2IPQ8NCF5 419 aa22.84■■□□□ 1.25
CDC42EP4-204ENST00000579611 SLC4A9Q96Q91 983 aa22.84■■□□□ 1.25
CDC42EP4-204ENST00000579611 COL24A1Q17RW2 1714 aa22.84■■□□□ 1.25
CDC42EP4-204ENST00000579611 PPP2R1AP30153 589 aa22.83■■□□□ 1.25
CDC42EP4-204ENST00000579611 CNGB1Q14028 1251 aaPredicted RBP22.83■■□□□ 1.25
CDC42EP4-204ENST00000579611 CFAP53Q96M91 514 aa22.83■■□□□ 1.25
CDC42EP4-204ENST00000579611 C4BP0C0L5 1744 aa22.82■■□□□ 1.24
CDC42EP4-204ENST00000579611 TUBGCP6Q96RT7 1819 aa22.82■■□□□ 1.24
CDC42EP4-204ENST00000579611 DCAF8L1A6NGE4 600 aa22.82■■□□□ 1.24
CDC42EP4-204ENST00000579611 MTHFSDQ2M296 383 aaKnown RBP22.82■■□□□ 1.24
CDC42EP4-204ENST00000579611 AMIGO3Q86WK7 504 aa22.82■■□□□ 1.24
CDC42EP4-204ENST00000579611 TAF1LQ8IZX4 1826 aa22.82■■□□□ 1.24
CDC42EP4-204ENST00000579611 MSH5O43196 834 aa22.81■■□□□ 1.24
CDC42EP4-204ENST00000579611 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.8■■□□□ 1.24
CDC42EP4-204ENST00000579611 U2SURPO15042 1029 aaKnown RBP22.8■■□□□ 1.24
CDC42EP4-204ENST00000579611 RC3H1Q5TC82 1133 aaKnown RBP22.8■■□□□ 1.24
CDC42EP4-204ENST00000579611 SLC52A2Q9HAB3 445 aa22.8■■□□□ 1.24
CDC42EP4-204ENST00000579611 ZNF831Q5JPB2 1677 aa22.79■■□□□ 1.24
CDC42EP4-204ENST00000579611 RNMTO43148 476 aaKnown RBP22.79■■□□□ 1.24
CDC42EP4-204ENST00000579611 LGR6Q9HBX8 967 aa22.79■■□□□ 1.24
CDC42EP4-204ENST00000579611 RBM42Q9BTD8 480 aaKnown RBP22.78■■□□□ 1.24
CDC42EP4-204ENST00000579611 NUDCQ9Y266 331 aa22.77■■□□□ 1.24
CDC42EP4-204ENST00000579611 MRC1P22897 1456 aa22.77■■□□□ 1.24
CDC42EP4-204ENST00000579611 CNTNAP4Q9C0A0 1308 aa22.77■■□□□ 1.24
CDC42EP4-204ENST00000579611 GNPATO15228 680 aa22.76■■□□□ 1.23
CDC42EP4-204ENST00000579611 GAS2L2Q8NHY3 880 aa22.76■■□□□ 1.23
CDC42EP4-204ENST00000579611 RSPH6AQ9H0K4 717 aa22.75■■□□□ 1.23
CDC42EP4-204ENST00000579611 UTRNP46939 3433 aa22.75■■□□□ 1.23
CDC42EP4-204ENST00000579611 PTCD1O75127 700 aaKnown RBP22.74■■□□□ 1.23
CDC42EP4-204ENST00000579611 PHF14O94880 888 aa22.74■■□□□ 1.23
CDC42EP4-204ENST00000579611 ADRA2BP18089 450 aa22.74■■□□□ 1.23
CDC42EP4-204ENST00000579611 RTCBQ9Y3I0 505 aaKnown RBP22.74■■□□□ 1.23
CDC42EP4-204ENST00000579611 UBR3Q6ZT12 1888 aa22.73■■□□□ 1.23
CDC42EP4-204ENST00000579611 RPS6KA4O75676 772 aa22.73■■□□□ 1.23
CDC42EP4-204ENST00000579611 MSL1Q68DK7 614 aa22.73■■□□□ 1.23
CDC42EP4-204ENST00000579611 ADAMTS7Q9UKP4 1686 aa22.73■■□□□ 1.23
CDC42EP4-204ENST00000579611 SCN11AQ9UI33 1791 aa22.73■■□□□ 1.23
CDC42EP4-204ENST00000579611 FCHSD2O94868 740 aa22.72■■□□□ 1.23
CDC42EP4-204ENST00000579611 SMIM5Q71RC9 77 aa22.72■■□□□ 1.23
CDC42EP4-204ENST00000579611 GNAT3A8MTJ3 354 aa22.71■■□□□ 1.23
CDC42EP4-204ENST00000579611 PRKAR2BP31323 418 aa22.71■■□□□ 1.23
CDC42EP4-204ENST00000579611 TRAPPC3LQ5T215 181 aa22.71■■□□□ 1.23
CDC42EP4-204ENST00000579611 PHACTR3Q96KR7 559 aa22.71■■□□□ 1.23
CDC42EP4-204ENST00000579611 CD2APQ9Y5K6 639 aa22.71■■□□□ 1.23
CDC42EP4-204ENST00000579611 IL17REQ8NFR9 667 aa22.7■■□□□ 1.22
CDC42EP4-204ENST00000579611 U2AF1L5P0DN76 240 aaPredicted RBP22.69■■□□□ 1.22
CDC42EP4-204ENST00000579611 U2AF1Q01081 240 aaKnown RBP eCLIP22.69■■□□□ 1.22
CDC42EP4-204ENST00000579611 VSIG10Q8N0Z9 540 aa22.69■■□□□ 1.22
CDC42EP4-204ENST00000579611 ARHGEF1Q92888 912 aaKnown RBP22.68■■□□□ 1.22
CDC42EP4-204ENST00000579611 CICQ96RK0 1608 aaPredicted RBP22.68■■□□□ 1.22
CDC42EP4-204ENST00000579611 CEMIPQ8WUJ3 1361 aa22.67■■□□□ 1.22
CDC42EP4-204ENST00000579611 CRKLP46109 303 aaKnown RBP22.67■■□□□ 1.22
CDC42EP4-204ENST00000579611 COL5A3P25940 1745 aaPredicted RBP22.66■■□□□ 1.22
CDC42EP4-204ENST00000579611 SLC39A6Q13433 755 aa22.66■■□□□ 1.22
CDC42EP4-204ENST00000579611 NLGN1Q8N2Q7 840 aa22.66■■□□□ 1.22
CDC42EP4-204ENST00000579611 NLGN2Q8NFZ4 835 aa22.66■■□□□ 1.22
CDC42EP4-204ENST00000579611 RALBP1Q15311 655 aa22.65■■□□□ 1.22
CDC42EP4-204ENST00000579611 INTS5Q6P9B9 1019 aaKnown RBP22.65■■□□□ 1.22
CDC42EP4-204ENST00000579611 KLHL34Q8N239 644 aa22.65■■□□□ 1.22
CDC42EP4-204ENST00000579611 YY1P25490 414 aa22.64■■□□□ 1.21
CDC42EP4-204ENST00000579611 TEFQ10587 303 aa22.64■■□□□ 1.21
CDC42EP4-204ENST00000579611 DNAJC10Q8IXB1 793 aa22.64■■□□□ 1.21
CDC42EP4-204ENST00000579611 KCPQ6ZWJ8 1503 aa22.63■■□□□ 1.21
CDC42EP4-204ENST00000579611 CYP19A1P11511 503 aaPredicted RBP22.63■■□□□ 1.21
CDC42EP4-204ENST00000579611 RFC4P35249 363 aa22.63■■□□□ 1.21
CDC42EP4-204ENST00000579611 HTATSF1O43719 755 aaKnown RBP22.62■■□□□ 1.21
CDC42EP4-204ENST00000579611 GYS1P13807 737 aa22.62■■□□□ 1.21
CDC42EP4-204ENST00000579611 GOLGB1Q14789 3259 aaKnown RBP22.61■■□□□ 1.21
CDC42EP4-204ENST00000579611 MMP10P09238 476 aa22.61■■□□□ 1.21
CDC42EP4-204ENST00000579611 GPR162Q16538 588 aa22.61■■□□□ 1.21
CDC42EP4-204ENST00000579611 ZNF790Q6PG37 636 aa22.61■■□□□ 1.21
CDC42EP4-204ENST00000579611 TTC5Q8N0Z6 440 aa22.61■■□□□ 1.21
CDC42EP4-204ENST00000579611 CCDC87Q9NVE4 849 aa22.61■■□□□ 1.21
CDC42EP4-204ENST00000579611 MYH14Q7Z406 1995 aaKnown RBP22.61■■□□□ 1.21
CDC42EP4-204ENST00000579611 DDX10Q13206 875 aaKnown RBP22.6■■□□□ 1.21
CDC42EP4-204ENST00000579611 TJP1Q07157 1748 aa22.6■■□□□ 1.21
CDC42EP4-204ENST00000579611 SOS1Q07889 1333 aaPredicted RBP22.58■■□□□ 1.21
CDC42EP4-204ENST00000579611 USP42Q9H9J4 1324 aaKnown RBP22.58■■□□□ 1.21
CDC42EP4-204ENST00000579611 ZNF496Q96IT1 587 aaPredicted RBP22.58■■□□□ 1.21
CDC42EP4-204ENST00000579611 TEX13AQ9BXU3 409 aaPredicted RBP22.58■■□□□ 1.21
CDC42EP4-204ENST00000579611 RTF1Q92541 710 aaKnown RBP22.57■■□□□ 1.2
CDC42EP4-204ENST00000579611 HEG1Q9ULI3 1381 aa22.56■■□□□ 1.2
CDC42EP4-204ENST00000579611 GRIN3BO60391 1043 aa22.56■■□□□ 1.2
CDC42EP4-204ENST00000579611 STARD3NLO95772 234 aa22.56■■□□□ 1.2
CDC42EP4-204ENST00000579611 PLEKHF1Q96S99 279 aa22.56■■□□□ 1.2
CDC42EP4-204ENST00000579611 BTBD11A6QL63 1104 aa22.55■■□□□ 1.2
CDC42EP4-204ENST00000579611 PNNQ9H307 717 aaKnown RBP22.55■■□□□ 1.2
CDC42EP4-204ENST00000579611 ZBTB1Q9Y2K1 713 aa22.55■■□□□ 1.2
CDC42EP4-204ENST00000579611 UBR2Q8IWV8 1755 aa22.54■■□□□ 1.2
CDC42EP4-204ENST00000579611 YBX3P16989 372 aaKnown RBP eCLIP22.54■■□□□ 1.2
CDC42EP4-204ENST00000579611 FMNL2Q96PY5 1086 aa22.54■■□□□ 1.2
CDC42EP4-204ENST00000579611 NEFMP07197 916 aa22.53■■□□□ 1.2
CDC42EP4-204ENST00000579611 MCM10Q7L590 875 aa22.53■■□□□ 1.2
CDC42EP4-204ENST00000579611 SRP68Q9UHB9 627 aaKnown RBP22.53■■□□□ 1.2
CDC42EP4-204ENST00000579611 ZEB1P37275 1124 aaPredicted RBP22.52■■□□□ 1.2
CDC42EP4-204ENST00000579611 TGFB2P61812 414 aa22.52■■□□□ 1.2
CDC42EP4-204ENST00000579611 FKBP8Q14318 412 aa22.52■■□□□ 1.2
CDC42EP4-204ENST00000579611 NARFQ9UHQ1 456 aa22.52■■□□□ 1.2
CDC42EP4-204ENST00000579611 PARP3Q9Y6F1 533 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms