RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 ZBTB7AO95365 584 aa23.3■■□□□ 1.32
ITGB4-205ENST00000579211 ATP6V1AP38606 617 aa23.3■■□□□ 1.32
ITGB4-205ENST00000579211 SIK1P57059 783 aa23.3■■□□□ 1.32
ITGB4-205ENST00000579211 AKT1S1Q96B36 256 aa23.3■■□□□ 1.32
ITGB4-205ENST00000579211 RSPH6AQ9H0K4 717 aa23.3■■□□□ 1.32
ITGB4-205ENST00000579211 PPP1R1BQ9UD71 204 aaPredicted RBP23.3■■□□□ 1.32
ITGB4-205ENST00000579211 RNMTO43148 476 aaKnown RBP23.29■■□□□ 1.32
ITGB4-205ENST00000579211 C4BP0C0L5 1744 aa23.29■■□□□ 1.32
ITGB4-205ENST00000579211 PDGFDQ9GZP0 370 aaPredicted RBP23.29■■□□□ 1.32
ITGB4-205ENST00000579211 LGR6Q9HBX8 967 aa23.29■■□□□ 1.32
ITGB4-205ENST00000579211 MYBBP1AQ9BQG0 1328 aaKnown RBP23.29■■□□□ 1.32
ITGB4-205ENST00000579211 GNAT3A8MTJ3 354 aa23.28■■□□□ 1.32
ITGB4-205ENST00000579211 DLG5Q8TDM6 1919 aa23.27■■□□□ 1.32
ITGB4-205ENST00000579211 AK7Q96M32 723 aa23.27■■□□□ 1.32
ITGB4-205ENST00000579211 ATF5Q9Y2D1 282 aaPredicted RBP23.27■■□□□ 1.32
ITGB4-205ENST00000579211 PHACTR3Q96KR7 559 aa23.26■■□□□ 1.31
ITGB4-205ENST00000579211 PNNQ9H307 717 aaKnown RBP23.26■■□□□ 1.31
ITGB4-205ENST00000579211 SLC52A2Q9HAB3 445 aa23.26■■□□□ 1.31
ITGB4-205ENST00000579211 SRCAPQ6ZRS2 3230 aa23.26■■□□□ 1.31
ITGB4-205ENST00000579211 MAP3K5Q99683 1374 aa23.26■■□□□ 1.31
ITGB4-205ENST00000579211 UBR3Q6ZT12 1888 aa23.24■■□□□ 1.31
ITGB4-205ENST00000579211 TEFQ10587 303 aa23.24■■□□□ 1.31
ITGB4-205ENST00000579211 MTFR1LQ9H019 292 aa23.24■■□□□ 1.31
ITGB4-205ENST00000579211 ZNF831Q5JPB2 1677 aa23.24■■□□□ 1.31
ITGB4-205ENST00000579211 ADAMTS7Q9UKP4 1686 aa23.23■■□□□ 1.31
ITGB4-205ENST00000579211 PTCD1O75127 700 aaKnown RBP23.23■■□□□ 1.31
ITGB4-205ENST00000579211 RTF1Q92541 710 aaKnown RBP23.23■■□□□ 1.31
ITGB4-205ENST00000579211 PNPLA7Q6ZV29 1317 aa23.23■■□□□ 1.31
ITGB4-205ENST00000579211 FLAD1Q8NFF5 587 aa23.22■■□□□ 1.31
ITGB4-205ENST00000579211 SLC16A10Q8TF71 515 aa23.22■■□□□ 1.31
ITGB4-205ENST00000579211 PRKRIP1Q9H875 184 aaPredicted RBP23.21■■□□□ 1.31
ITGB4-205ENST00000579211 MAPK8IP3Q9UPT6 1336 aa23.21■■□□□ 1.31
ITGB4-205ENST00000579211 COL5A3P25940 1745 aaPredicted RBP23.21■■□□□ 1.31
ITGB4-205ENST00000579211 SIPA1L3O60292 1781 aaPredicted RBP23.21■■□□□ 1.31
ITGB4-205ENST00000579211 ITPK1Q13572 414 aa23.2■■□□□ 1.3
ITGB4-205ENST00000579211 LINC00116Q8NCU8 138 aa23.2■■□□□ 1.3
ITGB4-205ENST00000579211 TTC5Q8N0Z6 440 aa23.19■■□□□ 1.3
ITGB4-205ENST00000579211 MRC1P22897 1456 aa23.18■■□□□ 1.3
ITGB4-205ENST00000579211 PHF14O94880 888 aa23.18■■□□□ 1.3
ITGB4-205ENST00000579211 SLC39A6Q13433 755 aa23.18■■□□□ 1.3
ITGB4-205ENST00000579211 WDR43Q15061 677 aaKnown RBP eCLIP23.18■■□□□ 1.3
ITGB4-205ENST00000579211 COL23A1Q86Y22 540 aaPredicted RBP23.18■■□□□ 1.3
ITGB4-205ENST00000579211 IL17REQ8NFR9 667 aa23.18■■□□□ 1.3
ITGB4-205ENST00000579211 GNPATO15228 680 aa23.17■■□□□ 1.3
ITGB4-205ENST00000579211 POLD1P28340 1107 aa23.17■■□□□ 1.3
ITGB4-205ENST00000579211 TJP1Q07157 1748 aa23.16■■□□□ 1.3
ITGB4-205ENST00000579211 MYH14Q7Z406 1995 aaKnown RBP23.16■■□□□ 1.3
ITGB4-205ENST00000579211 SLC4A9Q96Q91 983 aa23.15■■□□□ 1.3
ITGB4-205ENST00000579211 UBR2Q8IWV8 1755 aa23.14■■□□□ 1.3
ITGB4-205ENST00000579211 MCM10Q7L590 875 aa23.14■■□□□ 1.29
ITGB4-205ENST00000579211 RTCBQ9Y3I0 505 aaKnown RBP23.14■■□□□ 1.29
ITGB4-205ENST00000579211 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.13■■□□□ 1.29
ITGB4-205ENST00000579211 SSFA2P28290 1259 aa23.13■■□□□ 1.29
ITGB4-205ENST00000579211 BTBD11A6QL63 1104 aa23.12■■□□□ 1.29
ITGB4-205ENST00000579211 HTATSF1O43719 755 aaKnown RBP23.12■■□□□ 1.29
ITGB4-205ENST00000579211 PTGER2P43116 358 aa23.12■■□□□ 1.29
ITGB4-205ENST00000579211 COL24A1Q17RW2 1714 aa23.12■■□□□ 1.29
ITGB4-205ENST00000579211 ANP32CO43423 234 aa23.11■■□□□ 1.29
ITGB4-205ENST00000579211 TRAPPC3LQ5T215 181 aa23.11■■□□□ 1.29
ITGB4-205ENST00000579211 RC3H1Q5TC82 1133 aaKnown RBP23.11■■□□□ 1.29
ITGB4-205ENST00000579211 ARXQ96QS3 562 aa23.11■■□□□ 1.29
ITGB4-205ENST00000579211 PLEKHF1Q96S99 279 aa23.11■■□□□ 1.29
ITGB4-205ENST00000579211 DCTN1Q14203 1278 aa23.1■■□□□ 1.29
ITGB4-205ENST00000579211 NFE2L2Q16236 605 aa23.1■■□□□ 1.29
ITGB4-205ENST00000579211 MSL1Q68DK7 614 aa23.1■■□□□ 1.29
ITGB4-205ENST00000579211 SMIM5Q71RC9 77 aa23.1■■□□□ 1.29
ITGB4-205ENST00000579211 KLHL34Q8N239 644 aa23.1■■□□□ 1.29
ITGB4-205ENST00000579211 CICQ96RK0 1608 aaPredicted RBP23.1■■□□□ 1.29
ITGB4-205ENST00000579211 CNTNAP4Q9C0A0 1308 aa23.09■■□□□ 1.29
ITGB4-205ENST00000579211 ZNF790Q6PG37 636 aa23.09■■□□□ 1.29
ITGB4-205ENST00000579211 DNAJC10Q8IXB1 793 aa23.09■■□□□ 1.29
ITGB4-205ENST00000579211 CEMIPQ8WUJ3 1361 aa23.09■■□□□ 1.29
ITGB4-205ENST00000579211 KCPQ6ZWJ8 1503 aa23.08■■□□□ 1.29
ITGB4-205ENST00000579211 DCAF8L1A6NGE4 600 aa23.08■■□□□ 1.29
ITGB4-205ENST00000579211 CRKLP46109 303 aaKnown RBP23.08■■□□□ 1.29
ITGB4-205ENST00000579211 CCDC146Q8IYE0 955 aa23.07■■□□□ 1.28
ITGB4-205ENST00000579211 VSIG10Q8N0Z9 540 aa23.07■■□□□ 1.28
ITGB4-205ENST00000579211 RPS6KA4O75676 772 aa23.06■■□□□ 1.28
ITGB4-205ENST00000579211 RFC4P35249 363 aa23.06■■□□□ 1.28
ITGB4-205ENST00000579211 AMIGO3Q86WK7 504 aa23.06■■□□□ 1.28
ITGB4-205ENST00000579211 FMNL2Q96PY5 1086 aa23.06■■□□□ 1.28
ITGB4-205ENST00000579211 SGIP1Q9BQI5 828 aa23.06■■□□□ 1.28
ITGB4-205ENST00000579211 ADRA2BP18089 450 aa23.05■■□□□ 1.28
ITGB4-205ENST00000579211 RIPK4P57078 832 aa23.05■■□□□ 1.28
ITGB4-205ENST00000579211 TEX13AQ9BXU3 409 aaPredicted RBP23.05■■□□□ 1.28
ITGB4-205ENST00000579211 C4AP0C0L4 1744 aa23.05■■□□□ 1.28
ITGB4-205ENST00000579211 STARD3NLO95772 234 aa23.04■■□□□ 1.28
ITGB4-205ENST00000579211 TAF7Q15545 349 aaPredicted RBP23.04■■□□□ 1.28
ITGB4-205ENST00000579211 RUNDC1Q96C34 613 aa23.04■■□□□ 1.28
ITGB4-205ENST00000579211 ZNF496Q96IT1 587 aaPredicted RBP23.04■■□□□ 1.28
ITGB4-205ENST00000579211 FHDC1Q9C0D6 1143 aaPredicted RBP23.04■■□□□ 1.28
ITGB4-205ENST00000579211 CCDC87Q9NVE4 849 aa23.04■■□□□ 1.28
ITGB4-205ENST00000579211 ADAMTS8Q9UP79 889 aa23.04■■□□□ 1.28
ITGB4-205ENST00000579211 NEUROD2Q15784 382 aa23.03■■□□□ 1.28
ITGB4-205ENST00000579211 ARHGEF1Q92888 912 aaKnown RBP23.03■■□□□ 1.28
ITGB4-205ENST00000579211 HEG1Q9ULI3 1381 aa23.02■■□□□ 1.28
ITGB4-205ENST00000579211 CYP19A1P11511 503 aaPredicted RBP23.02■■□□□ 1.28
ITGB4-205ENST00000579211 LMOD3Q0VAK6 560 aa23.02■■□□□ 1.28
ITGB4-205ENST00000579211 PNISRQ8TF01 805 aaKnown RBP23.01■■□□□ 1.27
ITGB4-205ENST00000579211 KDM3BQ7LBC6 1761 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms