RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 MEGF6O75095 1541 aa11.58□□□□□ -0.56
PPP4R1-211ENST00000578875 TNRC6CQ9HCJ0 1690 aaKnown RBP11.58□□□□□ -0.56
PPP4R1-211ENST00000578875 USP31Q70CQ4 1352 aa11.57□□□□□ -0.56
PPP4R1-211ENST00000578875 LOC102724428A0A0B4J2F2 783 aa11.57□□□□□ -0.56
PPP4R1-211ENST00000578875 SIK1P57059 783 aa11.57□□□□□ -0.56
PPP4R1-211ENST00000578875 TRAPPC3LQ5T215 181 aa11.57□□□□□ -0.56
PPP4R1-211ENST00000578875 CHADLQ6NUI6 762 aa11.57□□□□□ -0.56
PPP4R1-211ENST00000578875 ARHGEF1Q92888 912 aaKnown RBP11.57□□□□□ -0.56
PPP4R1-211ENST00000578875 STAC3Q96MF2 364 aa11.57□□□□□ -0.56
PPP4R1-211ENST00000578875 GYS1P13807 737 aa11.56□□□□□ -0.56
PPP4R1-211ENST00000578875 SMARCC1Q92922 1105 aaPredicted RBP11.56□□□□□ -0.56
PPP4R1-211ENST00000578875 NSD3Q9BZ95 1437 aa11.56□□□□□ -0.56
PPP4R1-211ENST00000578875 PARP3Q9Y6F1 533 aa11.56□□□□□ -0.56
PPP4R1-211ENST00000578875 CYP27B1O15528 508 aa11.55□□□□□ -0.56
PPP4R1-211ENST00000578875 ATP6V1AP38606 617 aa11.55□□□□□ -0.56
PPP4R1-211ENST00000578875 ASAP1Q9ULH1 1129 aa11.55□□□□□ -0.56
PPP4R1-211ENST00000578875 EVC2Q86UK5 1308 aa11.55□□□□□ -0.56
PPP4R1-211ENST00000578875 BRCA1P38398 1863 aaKnown RBP11.55□□□□□ -0.56
PPP4R1-211ENST00000578875 LTN1O94822 1766 aa11.54□□□□□ -0.56
PPP4R1-211ENST00000578875 LMNB1P20700 586 aa11.54□□□□□ -0.56
PPP4R1-211ENST00000578875 TSKSQ9UJT2 592 aa11.54□□□□□ -0.56
PPP4R1-211ENST00000578875 TNRC18O15417 2968 aaPredicted RBP11.54□□□□□ -0.56
PPP4R1-211ENST00000578875 HMGB2P26583 209 aaKnown RBP11.53□□□□□ -0.56
PPP4R1-211ENST00000578875 HOXC9P31274 260 aa11.53□□□□□ -0.56
PPP4R1-211ENST00000578875 PASKQ96RG2 1323 aa11.53□□□□□ -0.56
PPP4R1-211ENST00000578875 ARFGEF1Q9Y6D6 1849 aa11.53□□□□□ -0.56
PPP4R1-211ENST00000578875 RGPD2P0DJD1 1756 aa11.52□□□□□ -0.57
PPP4R1-211ENST00000578875 ITGBL1O95965 494 aaPredicted RBP11.52□□□□□ -0.57
PPP4R1-211ENST00000578875 DDR1Q08345 913 aa11.52□□□□□ -0.57
PPP4R1-211ENST00000578875 SLC4A9Q96Q91 983 aa11.52□□□□□ -0.57
PPP4R1-211ENST00000578875 RTCBQ9Y3I0 505 aaKnown RBP11.52□□□□□ -0.57
PPP4R1-211ENST00000578875 MAP3K19Q56UN5 1328 aa11.52□□□□□ -0.57
PPP4R1-211ENST00000578875 SBNO2Q9Y2G9 1366 aa11.52□□□□□ -0.57
PPP4R1-211ENST00000578875 PDE4DIPQ5VU43 2346 aa11.52□□□□□ -0.57
PPP4R1-211ENST00000578875 KDM6AO15550 1401 aaPredicted RBP11.52□□□□□ -0.57
PPP4R1-211ENST00000578875 TMEM88BA6NKF7 163 aa11.51□□□□□ -0.57
PPP4R1-211ENST00000578875 DDNO94850 711 aaPredicted RBP11.51□□□□□ -0.57
PPP4R1-211ENST00000578875 DEFB115Q30KQ5 88 aa11.51□□□□□ -0.57
PPP4R1-211ENST00000578875 MCOLN1Q9GZU1 580 aa11.51□□□□□ -0.57
PPP4R1-211ENST00000578875 SRP68Q9UHB9 627 aaKnown RBP11.51□□□□□ -0.57
PPP4R1-211ENST00000578875 FAM208AQ9UK61 1670 aaKnown RBP11.51□□□□□ -0.57
PPP4R1-211ENST00000578875 NFKBIEO00221 500 aa11.5□□□□□ -0.57
PPP4R1-211ENST00000578875 TATP17735 454 aaPredicted RBP11.5□□□□□ -0.57
PPP4R1-211ENST00000578875 AMPHP49418 695 aa11.5□□□□□ -0.57
PPP4R1-211ENST00000578875 FKBP8Q14318 412 aa11.5□□□□□ -0.57
PPP4R1-211ENST00000578875 DPY19L2Q6NUT2 758 aa11.5□□□□□ -0.57
PPP4R1-211ENST00000578875 RAPGEF4Q8WZA2 1011 aa11.5□□□□□ -0.57
PPP4R1-211ENST00000578875 WDR33Q9C0J8 1336 aaKnown RBP11.5□□□□□ -0.57
PPP4R1-211ENST00000578875 ZC3H4Q9UPT8 1303 aaKnown RBP11.5□□□□□ -0.57
PPP4R1-211ENST00000578875 RFC4P35249 363 aa11.49□□□□□ -0.57
PPP4R1-211ENST00000578875 SLC12A5Q9H2X9 1139 aa11.49□□□□□ -0.57
PPP4R1-211ENST00000578875 ATG3Q9NT62 314 aa11.49□□□□□ -0.57
PPP4R1-211ENST00000578875 C4AP0C0L4 1744 aa11.49□□□□□ -0.57
PPP4R1-211ENST00000578875 MAP2P11137 1827 aaKnown RBP11.49□□□□□ -0.57
PPP4R1-211ENST00000578875 MAP2K1Q02750 393 aaPredicted RBP11.48□□□□□ -0.57
PPP4R1-211ENST00000578875 VIRMAQ69YN4 1812 aaKnown RBP11.48□□□□□ -0.57
PPP4R1-211ENST00000578875 PCDH11XQ9BZA7 1347 aa11.47□□□□□ -0.57
PPP4R1-211ENST00000578875 PCDH11YQ9BZA8 1340 aa11.47□□□□□ -0.57
PPP4R1-211ENST00000578875 TMC1Q8TDI8 760 aa11.47□□□□□ -0.57
PPP4R1-211ENST00000578875 CD163L1Q9NR16 1453 aa11.46□□□□□ -0.57
PPP4R1-211ENST00000578875 RASSF10A6NK89 507 aa11.46□□□□□ -0.57
PPP4R1-211ENST00000578875 RPS6KA4O75676 772 aa11.46□□□□□ -0.57
PPP4R1-211ENST00000578875 FMR1Q06787 632 aaKnown RBP eCLIP11.46□□□□□ -0.572e-6■■■■□ 20.3
PPP4R1-211ENST00000578875 RRS1Q15050 365 aaKnown RBP11.46□□□□□ -0.57
PPP4R1-211ENST00000578875 ZNF219Q9P2Y4 722 aaPredicted RBP11.46□□□□□ -0.57
PPP4R1-211ENST00000578875 ITGB4P16144 1822 aa11.46□□□□□ -0.58
PPP4R1-211ENST00000578875 CCDC88AQ3V6T2 1871 aa11.45□□□□□ -0.58
PPP4R1-211ENST00000578875 CGNL1Q0VF96 1302 aa11.45□□□□□ -0.58
PPP4R1-211ENST00000578875 TM4SF1P30408 202 aa11.45□□□□□ -0.58
PPP4R1-211ENST00000578875 SOX10P56693 466 aa11.45□□□□□ -0.58
PPP4R1-211ENST00000578875 GRM1Q13255 1194 aa11.45□□□□□ -0.58
PPP4R1-211ENST00000578875 ERFEQ4G0M1 354 aa11.45□□□□□ -0.58
PPP4R1-211ENST00000578875 RBM42Q9BTD8 480 aaKnown RBP11.45□□□□□ -0.58
PPP4R1-211ENST00000578875 POLRMTO00411 1230 aaKnown RBP11.44□□□□□ -0.58
PPP4R1-211ENST00000578875 DGKZQ13574 1117 aa11.44□□□□□ -0.58
PPP4R1-211ENST00000578875 NKX1-1Q15270 411 aaPredicted RBP11.44□□□□□ -0.58
PPP4R1-211ENST00000578875 TAF1DQ9H5J8 278 aaPredicted RBP11.44□□□□□ -0.58
PPP4R1-211ENST00000578875 TMOD3Q9NYL9 352 aa11.44□□□□□ -0.58
PPP4R1-211ENST00000578875 EAPPQ56P03 285 aaPredicted RBP11.43□□□□□ -0.58
PPP4R1-211ENST00000578875 HSP90AB2PQ58FF8 381 aa11.43□□□□□ -0.58
PPP4R1-211ENST00000578875 RC3H1Q5TC82 1133 aaKnown RBP11.43□□□□□ -0.58
PPP4R1-211ENST00000578875 PRPF38BQ5VTL8 546 aaKnown RBP11.43□□□□□ -0.58
PPP4R1-211ENST00000578875 MAP1SQ66K74 1059 aaPredicted RBP11.43□□□□□ -0.58
PPP4R1-211ENST00000578875 LDHDQ86WU2 507 aa11.43□□□□□ -0.58
PPP4R1-211ENST00000578875 TTLL6Q8N841 843 aa11.43□□□□□ -0.58
PPP4R1-211ENST00000578875 ABT1Q9ULW3 272 aaKnown RBP11.43□□□□□ -0.58
PPP4R1-211ENST00000578875 CLEC11AQ9Y240 323 aa11.43□□□□□ -0.58
PPP4R1-211ENST00000578875 ADRA2BP18089 450 aa11.42□□□□□ -0.58
PPP4R1-211ENST00000578875 CYP4F22Q6NT55 531 aa11.42□□□□□ -0.58
PPP4R1-211ENST00000578875 GPR101Q96P66 508 aaPredicted RBP11.42□□□□□ -0.58
PPP4R1-211ENST00000578875 MON2Q7Z3U7 1717 aa11.41□□□□□ -0.58
PPP4R1-211ENST00000578875 C21orf2O43822 256 aa11.41□□□□□ -0.58
PPP4R1-211ENST00000578875 AOC2O75106 756 aa11.41□□□□□ -0.58
PPP4R1-211ENST00000578875 HDGFL2Q7Z4V5 671 aaPredicted RBP11.41□□□□□ -0.58
PPP4R1-211ENST00000578875 CNTROBQ8N137 903 aa11.41□□□□□ -0.58
PPP4R1-211ENST00000578875 CAPNS2Q96L46 248 aa11.41□□□□□ -0.58
PPP4R1-211ENST00000578875 CASP8AP2Q9UKL3 1982 aa11.41□□□□□ -0.58
PPP4R1-211ENST00000578875 PAXIP1Q6ZW49 1069 aaPredicted RBP11.4□□□□□ -0.58
PPP4R1-211ENST00000578875 C2CD5Q86YS7 1000 aa11.4□□□□□ -0.58
PPP4R1-211ENST00000578875 BEGAINQ9BUH8 593 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms