RNA–Protein interactions for RNA: ENST00000578537.1

CTC1-205, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-205ENST00000578537 HTATSF1O43719 755 aaKnown RBP16.96■□□□□ 0.31
CTC1-205ENST00000578537 LMOD3Q0VAK6 560 aa16.96■□□□□ 0.31
CTC1-205ENST00000578537 NGEFQ8N5V2 710 aa16.96■□□□□ 0.31
CTC1-205ENST00000578537 TSR2Q969E8 191 aaKnown RBP16.95■□□□□ 0.3
CTC1-205ENST00000578537 KCPQ6ZWJ8 1503 aa16.95■□□□□ 0.3
CTC1-205ENST00000578537 ZNF853P0CG23 659 aa16.94■□□□□ 0.3
CTC1-205ENST00000578537 SLFN5Q08AF3 891 aa16.94■□□□□ 0.3
CTC1-205ENST00000578537 PTF1AQ7RTS3 328 aa16.94■□□□□ 0.3
CTC1-205ENST00000578537 WDR63Q8IWG1 891 aa16.94■□□□□ 0.3
CTC1-205ENST00000578537 RTF1Q92541 710 aaKnown RBP16.94■□□□□ 0.3
CTC1-205ENST00000578537 DCAF5Q96JK2 942 aa16.94■□□□□ 0.3
CTC1-205ENST00000578537 MIS18AQ9NYP9 233 aa16.94■□□□□ 0.3
CTC1-205ENST00000578537 LAMB4A4D0S4 1761 aa16.94■□□□□ 0.3
CTC1-205ENST00000578537 FANCIQ9NVI1 1328 aa16.94■□□□□ 0.3
CTC1-205ENST00000578537 TJP1Q07157 1748 aa16.93■□□□□ 0.3
CTC1-205ENST00000578537 KCNQ3O43525 872 aa16.93■□□□□ 0.3
CTC1-205ENST00000578537 GOLGA2Q08379 1002 aa16.93■□□□□ 0.3
CTC1-205ENST00000578537 TRMT2AQ8IZ69 625 aaKnown RBP16.93■□□□□ 0.3
CTC1-205ENST00000578537 IL16Q14005 1332 aa16.93■□□□□ 0.3
CTC1-205ENST00000578537 EN1Q05925 392 aaPredicted RBP16.92■□□□□ 0.3
CTC1-205ENST00000578537 DUSP27Q5VZP5 1158 aa16.92■□□□□ 0.3
CTC1-205ENST00000578537 ACSBG1Q96GR2 724 aa16.92■□□□□ 0.3
CTC1-205ENST00000578537 SLC52A2Q9HAB3 445 aa16.92■□□□□ 0.3
CTC1-205ENST00000578537 MBIPQ9NS73 344 aa16.92■□□□□ 0.3
CTC1-205ENST00000578537 BCL9O00512 1426 aa16.92■□□□□ 0.3
CTC1-205ENST00000578537 LY75O60449 1722 aa16.91■□□□□ 0.3
CTC1-205ENST00000578537 KRT24Q2M2I5 525 aa16.91■□□□□ 0.3
CTC1-205ENST00000578537 LAS1LQ9Y4W2 734 aaKnown RBP16.91■□□□□ 0.3
CTC1-205ENST00000578537 KCNQ2O43526 872 aa16.9■□□□□ 0.3
CTC1-205ENST00000578537 HSP90AB1P08238 724 aaKnown RBP16.9■□□□□ 0.3
CTC1-205ENST00000578537 PDE3BQ13370 1112 aa16.9■□□□□ 0.3
CTC1-205ENST00000578537 R3HDM1Q15032 1099 aaKnown RBP16.9■□□□□ 0.3
CTC1-205ENST00000578537 IFT57Q9NWB7 429 aa16.9■□□□□ 0.3
CTC1-205ENST00000578537 CICQ96RK0 1608 aaPredicted RBP16.89■□□□□ 0.29
CTC1-205ENST00000578537 CHL1O00533 1208 aa16.89■□□□□ 0.29
CTC1-205ENST00000578537 SLC39A6Q13433 755 aa16.89■□□□□ 0.29
CTC1-205ENST00000578537 NFATC2IPQ8NCF5 419 aa16.89■□□□□ 0.29
CTC1-205ENST00000578537 CFAP44Q96MT7 982 aa16.89■□□□□ 0.29
CTC1-205ENST00000578537 COL5A3P25940 1745 aaPredicted RBP16.88■□□□□ 0.29
CTC1-205ENST00000578537 E9PSI1 815 aa16.88■□□□□ 0.29
CTC1-205ENST00000578537 TEFQ10587 303 aa16.88■□□□□ 0.29
CTC1-205ENST00000578537 PIGBQ92521 554 aa16.88■□□□□ 0.29
CTC1-205ENST00000578537 TAF1LQ8IZX4 1826 aa16.88■□□□□ 0.29
CTC1-205ENST00000578537 ERVV-2B6SEH9 535 aa16.87■□□□□ 0.29
CTC1-205ENST00000578537 PRIM1P49642 420 aaKnown RBP16.87■□□□□ 0.29
CTC1-205ENST00000578537 CABP4P57796 275 aa16.87■□□□□ 0.29
CTC1-205ENST00000578537 GNAI1P63096 354 aa16.87■□□□□ 0.29
CTC1-205ENST00000578537 TAF7Q15545 349 aaPredicted RBP16.87■□□□□ 0.29
CTC1-205ENST00000578537 TSPYL4Q9UJ04 414 aa16.86■□□□□ 0.29
CTC1-205ENST00000578537 EXOSC9Q06265 439 aaKnown RBP16.85■□□□□ 0.29
CTC1-205ENST00000578537 TSPYL6Q8N831 410 aa16.85■□□□□ 0.29
CTC1-205ENST00000578537 TMOD3Q9NYL9 352 aa16.85■□□□□ 0.29
CTC1-205ENST00000578537 ZNF831Q5JPB2 1677 aa16.85■□□□□ 0.29
CTC1-205ENST00000578537 BTBD11A6QL63 1104 aa16.84■□□□□ 0.29
CTC1-205ENST00000578537 CALD1Q05682 793 aaKnown RBP16.84■□□□□ 0.29
CTC1-205ENST00000578537 EZH2Q15910 746 aaKnown RBP16.84■□□□□ 0.29
CTC1-205ENST00000578537 C8orf58Q8NAV2 365 aa16.84■□□□□ 0.29
CTC1-205ENST00000578537 SYTL4Q96C24 671 aaPredicted RBP16.84■□□□□ 0.29
CTC1-205ENST00000578537 ASAP1Q9ULH1 1129 aa16.84■□□□□ 0.29
CTC1-205ENST00000578537 HEG1Q9ULI3 1381 aa16.84■□□□□ 0.29
CTC1-205ENST00000578537 PRAMEF22A3QJZ6 481 aa16.83■□□□□ 0.28
CTC1-205ENST00000578537 EIF4A1P60842 406 aaKnown RBP16.83■□□□□ 0.28
CTC1-205ENST00000578537 RREB1Q92766 1687 aa16.83■□□□□ 0.28
CTC1-205ENST00000578537 ATG3Q9NT62 314 aa16.83■□□□□ 0.28
CTC1-205ENST00000578537 MYH14Q7Z406 1995 aaKnown RBP16.82■□□□□ 0.28
CTC1-205ENST00000578537 ZNF790Q6PG37 636 aa16.82■□□□□ 0.28
CTC1-205ENST00000578537 ZNF496Q96IT1 587 aaPredicted RBP16.82■□□□□ 0.28
CTC1-205ENST00000578537 MYH16Q9H6N6 1097 aa16.82■□□□□ 0.28
CTC1-205ENST00000578537 RGPD3A6NKT7 1758 aaPredicted RBP16.82■□□□□ 0.28
CTC1-205ENST00000578537 RGPD4Q7Z3J3 1758 aa16.82■□□□□ 0.28
CTC1-205ENST00000578537 YY1P25490 414 aa16.81■□□□□ 0.28
CTC1-205ENST00000578537 SLC4A9Q96Q91 983 aa16.81■□□□□ 0.28
CTC1-205ENST00000578537 CAMKK2Q96RR4 588 aa16.81■□□□□ 0.28
CTC1-205ENST00000578537 ELL2O00472 640 aaPredicted RBP16.8■□□□□ 0.28
CTC1-205ENST00000578537 BABAM1Q9NWV8 329 aa16.8■□□□□ 0.28
CTC1-205ENST00000578537 PALLDQ8WX93 1383 aa16.79■□□□□ 0.28
CTC1-205ENST00000578537 CACNA1FO60840 1977 aa16.79■□□□□ 0.28
CTC1-205ENST00000578537 FAM196AQ6ZSG2 479 aa16.79■□□□□ 0.28
CTC1-205ENST00000578537 TUBGCP6Q96RT7 1819 aa16.79■□□□□ 0.28
CTC1-205ENST00000578537 TRIM37O94972 964 aa16.78■□□□□ 0.28
CTC1-205ENST00000578537 NUP188Q5SRE5 1749 aa16.78■□□□□ 0.28
CTC1-205ENST00000578537 TCERG1O14776 1098 aaKnown RBP16.76■□□□□ 0.27
CTC1-205ENST00000578537 PTCD1O75127 700 aaKnown RBP16.76■□□□□ 0.27
CTC1-205ENST00000578537 VAMP4O75379 141 aa16.76■□□□□ 0.27
CTC1-205ENST00000578537 TWISTNBQ3B726 338 aaPredicted RBP16.76■□□□□ 0.27
CTC1-205ENST00000578537 GIGYF1O75420 1035 aaPredicted RBP16.75■□□□□ 0.27
CTC1-205ENST00000578537 APBA3O96018 575 aa16.75■□□□□ 0.27
CTC1-205ENST00000578537 BCL11BQ9C0K0 894 aaPredicted RBP16.75■□□□□ 0.27
CTC1-205ENST00000578537 C4BP0C0L5 1744 aa16.74■□□□□ 0.27
CTC1-205ENST00000578537 KCNQ4P56696 695 aa16.74■□□□□ 0.27
CTC1-205ENST00000578537 TTC5Q8N0Z6 440 aa16.74■□□□□ 0.27
CTC1-205ENST00000578537 NECTIN2Q92692 538 aa16.74■□□□□ 0.27
CTC1-205ENST00000578537 BCL2L13Q9BXK5 485 aa16.74■□□□□ 0.27
CTC1-205ENST00000578537 UBR3Q6ZT12 1888 aa16.73■□□□□ 0.27
CTC1-205ENST00000578537 ITPK1Q13572 414 aa16.73■□□□□ 0.27
CTC1-205ENST00000578537 DNAJC10Q8IXB1 793 aa16.73■□□□□ 0.27
CTC1-205ENST00000578537 FMNL2Q96PY5 1086 aa16.73■□□□□ 0.27
CTC1-205ENST00000578537 N4BP2Q86UW6 1770 aaPredicted RBP16.73■□□□□ 0.27
CTC1-205ENST00000578537 C4AP0C0L4 1744 aa16.73■□□□□ 0.27
CTC1-205ENST00000578537 RBM42Q9BTD8 480 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms