RNA–Protein interactions for RNA: ENST00000578307.1

BPTF-211, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 2,121 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-211ENST00000578307 BCL11BQ9C0K0 894 aaPredicted RBP11.98□□□□□ -0.49
BPTF-211ENST00000578307 NBPF6Q5VWK0 638 aa11.98□□□□□ -0.49
BPTF-211ENST00000578307 CEP85Q6P2H3 762 aa11.98□□□□□ -0.49
BPTF-211ENST00000578307 SLC4A10Q6U841 1118 aa11.98□□□□□ -0.49
BPTF-211ENST00000578307 NBPF4Q96M43 638 aa11.98□□□□□ -0.49
BPTF-211ENST00000578307 PDCL3Q9H2J4 239 aa11.98□□□□□ -0.49
BPTF-211ENST00000578307 PRDM4Q9UKN5 801 aa11.98□□□□□ -0.49
BPTF-211ENST00000578307 TRPM3Q9HCF6 1732 aaPredicted RBP11.97□□□□□ -0.49
BPTF-211ENST00000578307 GCP02774 474 aa11.97□□□□□ -0.49
BPTF-211ENST00000578307 NFKBIBQ15653 356 aa11.97□□□□□ -0.49
BPTF-211ENST00000578307 MEIS3Q99687 375 aa11.97□□□□□ -0.49
BPTF-211ENST00000578307 LMO7Q8WWI1 1683 aa11.97□□□□□ -0.49
BPTF-211ENST00000578307 LMOD2Q6P5Q4 547 aa11.96□□□□□ -0.49
BPTF-211ENST00000578307 N4BP2Q86UW6 1770 aaPredicted RBP11.96□□□□□ -0.49
BPTF-211ENST00000578307 HMMRO75330 724 aa11.96□□□□□ -0.5
BPTF-211ENST00000578307 XPCQ01831 940 aaPredicted RBP11.96□□□□□ -0.5
BPTF-211ENST00000578307 FLIIQ13045 1269 aa11.96□□□□□ -0.5
BPTF-211ENST00000578307 CEMIPQ8WUJ3 1361 aa11.96□□□□□ -0.5
BPTF-211ENST00000578307 F6X3S4 739 aa11.95□□□□□ -0.5
BPTF-211ENST00000578307 CLCN1P35523 988 aa11.95□□□□□ -0.5
BPTF-211ENST00000578307 FKBP5Q13451 457 aaPredicted RBP11.95□□□□□ -0.5
BPTF-211ENST00000578307 KRT28Q7Z3Y7 464 aa11.95□□□□□ -0.5
BPTF-211ENST00000578307 ARHGEF25Q86VW2 580 aa11.95□□□□□ -0.5
BPTF-211ENST00000578307 TBC1D2Q9BYX2 928 aa11.95□□□□□ -0.5
BPTF-211ENST00000578307 C19orf44Q9H6X5 657 aa11.95□□□□□ -0.5
BPTF-211ENST00000578307 C1orf167Q5SNV9 1468 aa11.95□□□□□ -0.5
BPTF-211ENST00000578307 MED1Q15648 1581 aaPredicted RBP11.95□□□□□ -0.5
BPTF-211ENST00000578307 KDM3BQ7LBC6 1761 aa11.95□□□□□ -0.5
BPTF-211ENST00000578307 PLEKHO1Q53GL0 409 aaPredicted RBP11.95□□□□□ -0.5
BPTF-211ENST00000578307 NCLP19338 710 aaKnown RBP11.94□□□□□ -0.5
BPTF-211ENST00000578307 AMOTQ4VCS5 1084 aa11.94□□□□□ -0.5
BPTF-211ENST00000578307 AKAP4Q5JQC9 854 aa11.94□□□□□ -0.5
BPTF-211ENST00000578307 LRRC59Q96AG4 307 aaKnown RBP11.94□□□□□ -0.5
BPTF-211ENST00000578307 CHMP4AQ9BY43 222 aa11.94□□□□□ -0.5
BPTF-211ENST00000578307 PXDNLA1KZ92 1463 aa11.93□□□□□ -0.5
BPTF-211ENST00000578307 GNAI2P04899 355 aa11.93□□□□□ -0.5
BPTF-211ENST00000578307 RBM25P49756 843 aaKnown RBP11.93□□□□□ -0.5
BPTF-211ENST00000578307 HDGFL1Q5TGJ6 251 aa11.93□□□□□ -0.5
BPTF-211ENST00000578307 PLEKHM2Q8IWE5 1019 aa11.93□□□□□ -0.5
BPTF-211ENST00000578307 NECTIN2Q92692 538 aa11.93□□□□□ -0.5
BPTF-211ENST00000578307 CAMTA1Q9Y6Y1 1673 aa11.93□□□□□ -0.5
BPTF-211ENST00000578307 CDC45O75419 566 aa11.93□□□□□ -0.5
BPTF-211ENST00000578307 GNAI3P08754 354 aa11.93□□□□□ -0.5
BPTF-211ENST00000578307 ZNF530Q6P9A1 599 aaPredicted RBP11.93□□□□□ -0.5
BPTF-211ENST00000578307 ANKRD24Q8TF21 1146 aa11.93□□□□□ -0.5
BPTF-211ENST00000578307 NCAPD2Q15021 1401 aa11.92□□□□□ -0.5
BPTF-211ENST00000578307 TEFQ10587 303 aa11.92□□□□□ -0.5
BPTF-211ENST00000578307 L1TD1Q5T7N2 865 aaKnown RBP11.92□□□□□ -0.5
BPTF-211ENST00000578307 SLKQ9H2G2 1235 aaPredicted RBP11.92□□□□□ -0.5
BPTF-211ENST00000578307 ALS2Q96Q42 1657 aa11.92□□□□□ -0.5
BPTF-211ENST00000578307 RGPD5Q99666 1765 aa11.92□□□□□ -0.5
BPTF-211ENST00000578307 HOXB7P09629 217 aa11.92□□□□□ -0.5
BPTF-211ENST00000578307 ATF3P18847 181 aa11.92□□□□□ -0.5
BPTF-211ENST00000578307 C1orf141Q5JVX7 400 aa11.92□□□□□ -0.5
BPTF-211ENST00000578307 TBC1D9Q6ZT07 1266 aa11.92□□□□□ -0.5
BPTF-211ENST00000578307 LGR6Q9HBX8 967 aa11.92□□□□□ -0.5
BPTF-211ENST00000578307 MST1RQ04912 1400 aa11.91□□□□□ -0.5
BPTF-211ENST00000578307 TPM2P07951 284 aa11.91□□□□□ -0.5
BPTF-211ENST00000578307 TTC22Q5TAA0 569 aa11.91□□□□□ -0.5
BPTF-211ENST00000578307 HSCBQ8IWL3 235 aa11.91□□□□□ -0.5
BPTF-211ENST00000578307 NAP1L5Q96NT1 182 aaPredicted RBP11.91□□□□□ -0.5
BPTF-211ENST00000578307 GSPT1P15170 499 aaKnown RBP11.9□□□□□ -0.5
BPTF-211ENST00000578307 EIF4A1P60842 406 aaKnown RBP11.9□□□□□ -0.5
BPTF-211ENST00000578307 OVOS2A0A0G2JMS6 1433 aa11.9□□□□□ -0.5
BPTF-211ENST00000578307 BTBD11A6QL63 1104 aa11.9□□□□□ -0.5
BPTF-211ENST00000578307 APBB1O00213 710 aa11.9□□□□□ -0.5
BPTF-211ENST00000578307 C16orf71Q8IYS4 520 aaPredicted RBP11.9□□□□□ -0.5
BPTF-211ENST00000578307 RRAGDQ9NQL2 400 aaPredicted RBP11.9□□□□□ -0.5
BPTF-211ENST00000578307 DCCP43146 1447 aa11.9□□□□□ -0.51
BPTF-211ENST00000578307 SMARCA5O60264 1052 aaPredicted RBP11.89□□□□□ -0.51
BPTF-211ENST00000578307 FRAT2O75474 233 aaPredicted RBP11.89□□□□□ -0.51
BPTF-211ENST00000578307 MPRIPQ6WCQ1 1025 aa11.89□□□□□ -0.51
BPTF-211ENST00000578307 NCOA3Q9Y6Q9 1424 aa11.89□□□□□ -0.51
BPTF-211ENST00000578307 STRCP1A6NGW2 1772 aa11.89□□□□□ -0.51
BPTF-211ENST00000578307 TMEM94Q12767 1356 aa11.89□□□□□ -0.51
BPTF-211ENST00000578307 EIF2S2P20042 333 aaKnown RBP11.89□□□□□ -0.51
BPTF-211ENST00000578307 ANTXR1Q9H6X2 564 aa11.89□□□□□ -0.51
BPTF-211ENST00000578307 PXDNQ92626 1479 aa11.88□□□□□ -0.51
BPTF-211ENST00000578307 RNMTO43148 476 aaKnown RBP11.88□□□□□ -0.51
BPTF-211ENST00000578307 CASC1Q6TDU7 716 aa11.88□□□□□ -0.51
BPTF-211ENST00000578307 PHAXQ9H814 394 aaKnown RBP11.88□□□□□ -0.51
BPTF-211ENST00000578307 AXIN2Q9Y2T1 843 aa11.88□□□□□ -0.51
BPTF-211ENST00000578307 ATP8B2P98198 1209 aa11.87□□□□□ -0.51
BPTF-211ENST00000578307 SNX21Q969T3 373 aa11.87□□□□□ -0.51
BPTF-211ENST00000578307 MAP7D2Q96T17 732 aa11.87□□□□□ -0.51
BPTF-211ENST00000578307 ERBB3P21860 1342 aa11.87□□□□□ -0.51
BPTF-211ENST00000578307 SIPA1L3O60292 1781 aaPredicted RBP11.87□□□□□ -0.51
BPTF-211ENST00000578307 UBTFL1P0CB47 393 aaPredicted RBP11.87□□□□□ -0.51
BPTF-211ENST00000578307 ZC3H6P61129 1189 aaKnown RBP11.87□□□□□ -0.51
BPTF-211ENST00000578307 OTUD7AQ8TE49 926 aaPredicted RBP11.87□□□□□ -0.51
BPTF-211ENST00000578307 LMTK3Q96Q04 1460 aa11.87□□□□□ -0.51
BPTF-211ENST00000578307 SPRYD3Q8NCJ5 442 aa11.86□□□□□ -0.51
BPTF-211ENST00000578307 SRCIN1Q9C0H9 1055 aa11.86□□□□□ -0.51
BPTF-211ENST00000578307 RNF216Q9NWF9 866 aaPredicted RBP11.86□□□□□ -0.51
BPTF-211ENST00000578307 CHPF2Q9P2E5 772 aa11.86□□□□□ -0.51
BPTF-211ENST00000578307 KCNQ3O43525 872 aa11.86□□□□□ -0.51
BPTF-211ENST00000578307 CADPS2Q86UW7 1296 aa11.86□□□□□ -0.51
BPTF-211ENST00000578307 LRRCC1Q9C099 1032 aa11.86□□□□□ -0.51
BPTF-211ENST00000578307 USP44Q9H0E7 712 aa11.86□□□□□ -0.51
BPTF-211ENST00000578307 OSBPL3Q9H4L5 887 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms