RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 PLEKHF1Q96S99 279 aa20.43■□□□□ 0.86
IFT20-206ENST00000578122 ERVV-2B6SEH9 535 aa20.42■□□□□ 0.86
IFT20-206ENST00000578122 MRS2Q9HD23 443 aa20.42■□□□□ 0.86
IFT20-206ENST00000578122 PIGBQ92521 554 aa20.41■□□□□ 0.86
IFT20-206ENST00000578122 TMOD3Q9NYL9 352 aa20.41■□□□□ 0.86
IFT20-206ENST00000578122 ADAMTS8Q9UP79 889 aa20.41■□□□□ 0.86
IFT20-206ENST00000578122 MAPK8IP3Q9UPT6 1336 aa20.41■□□□□ 0.86
IFT20-206ENST00000578122 MAP3K5Q99683 1374 aa20.41■□□□□ 0.86
IFT20-206ENST00000578122 GNAT3A8MTJ3 354 aa20.4■□□□□ 0.86
IFT20-206ENST00000578122 RNMTO43148 476 aaKnown RBP20.4■□□□□ 0.86
IFT20-206ENST00000578122 ATXN8OSP0DMR3 200 aa20.4■□□□□ 0.86
IFT20-206ENST00000578122 CABP4P57796 275 aa20.4■□□□□ 0.86
IFT20-206ENST00000578122 LGR6Q9HBX8 967 aa20.4■□□□□ 0.86
IFT20-206ENST00000578122 DLG5Q8TDM6 1919 aa20.39■□□□□ 0.86
IFT20-206ENST00000578122 RREB1Q92766 1687 aa20.39■□□□□ 0.86
IFT20-206ENST00000578122 ADAMTS7Q9UKP4 1686 aa20.39■□□□□ 0.86
IFT20-206ENST00000578122 DIEXFQ68CQ4 756 aaKnown RBP20.39■□□□□ 0.85
IFT20-206ENST00000578122 CCDC146Q8IYE0 955 aa20.37■□□□□ 0.85
IFT20-206ENST00000578122 RUNDC1Q96C34 613 aa20.37■□□□□ 0.85
IFT20-206ENST00000578122 LY75O60449 1722 aa20.36■□□□□ 0.85
IFT20-206ENST00000578122 NFE2L2Q16236 605 aa20.36■□□□□ 0.85
IFT20-206ENST00000578122 TXNRD1Q16881 649 aa20.36■□□□□ 0.85
IFT20-206ENST00000578122 PROM2Q8N271 834 aa20.36■□□□□ 0.85
IFT20-206ENST00000578122 IL17REQ8NFR9 667 aa20.36■□□□□ 0.85
IFT20-206ENST00000578122 PNISRQ8TF01 805 aaKnown RBP20.36■□□□□ 0.85
IFT20-206ENST00000578122 SMARCC1Q92922 1105 aaPredicted RBP20.36■□□□□ 0.85
IFT20-206ENST00000578122 ZBTB12Q9Y330 459 aaPredicted RBP20.36■□□□□ 0.85
IFT20-206ENST00000578122 NUP188Q5SRE5 1749 aa20.36■□□□□ 0.85
IFT20-206ENST00000578122 POTEHQ6S545 545 aa20.35■□□□□ 0.85
IFT20-206ENST00000578122 NFATC2IPQ8NCF5 419 aa20.35■□□□□ 0.85
IFT20-206ENST00000578122 RTF1Q92541 710 aaKnown RBP20.35■□□□□ 0.85
IFT20-206ENST00000578122 SLC52A2Q9HAB3 445 aa20.35■□□□□ 0.85
IFT20-206ENST00000578122 HTATSF1O43719 755 aaKnown RBP20.34■□□□□ 0.85
IFT20-206ENST00000578122 ASAP1Q9ULH1 1129 aa20.34■□□□□ 0.85
IFT20-206ENST00000578122 MRC1P22897 1456 aa20.34■□□□□ 0.85
IFT20-206ENST00000578122 PALLDQ8WX93 1383 aa20.34■□□□□ 0.85
IFT20-206ENST00000578122 ATG3Q9NT62 314 aa20.32■□□□□ 0.84
IFT20-206ENST00000578122 SIPA1L3O60292 1781 aaPredicted RBP20.31■□□□□ 0.84
IFT20-206ENST00000578122 TMPOP42166 694 aaKnown RBP20.31■□□□□ 0.84
IFT20-206ENST00000578122 TEFQ10587 303 aa20.31■□□□□ 0.84
IFT20-206ENST00000578122 SLC27A3Q5K4L6 730 aa20.31■□□□□ 0.84
IFT20-206ENST00000578122 MCM10Q7L590 875 aa20.31■□□□□ 0.84
IFT20-206ENST00000578122 CEMIPQ8WUJ3 1361 aa20.31■□□□□ 0.84
IFT20-206ENST00000578122 RIPK4P57078 832 aa20.3■□□□□ 0.84
IFT20-206ENST00000578122 DCTN1Q14203 1278 aa20.3■□□□□ 0.84
IFT20-206ENST00000578122 CCNL1Q9UK58 526 aaPredicted RBP20.3■□□□□ 0.84
IFT20-206ENST00000578122 NBPF14Q5TI25 921 aa20.29■□□□□ 0.84
IFT20-206ENST00000578122 LRRC4BQ9NT99 713 aa20.29■□□□□ 0.84
IFT20-206ENST00000578122 RRP7AQ9Y3A4 280 aaKnown RBP20.29■□□□□ 0.84
IFT20-206ENST00000578122 CCER2I3L3R5 266 aa20.28■□□□□ 0.84
IFT20-206ENST00000578122 KCNQ4P56696 695 aa20.28■□□□□ 0.84
IFT20-206ENST00000578122 NEUROD2Q15784 382 aa20.27■□□□□ 0.84
IFT20-206ENST00000578122 PAPPAQ13219 1627 aa20.27■□□□□ 0.83
IFT20-206ENST00000578122 TAF1LQ8IZX4 1826 aa20.26■□□□□ 0.83
IFT20-206ENST00000578122 LOC102724428A0A0B4J2F2 783 aa20.26■□□□□ 0.83
IFT20-206ENST00000578122 APAF1O14727 1248 aa20.26■□□□□ 0.83
IFT20-206ENST00000578122 SIK1P57059 783 aa20.26■□□□□ 0.83
IFT20-206ENST00000578122 LMOD3Q0VAK6 560 aa20.26■□□□□ 0.83
IFT20-206ENST00000578122 SLC39A6Q13433 755 aa20.26■□□□□ 0.83
IFT20-206ENST00000578122 FAM9BQ8IZU0 186 aa20.26■□□□□ 0.83
IFT20-206ENST00000578122 MIER1Q8N108 512 aa20.25■□□□□ 0.83
IFT20-206ENST00000578122 THUMPD2Q9BTF0 503 aaKnown RBP20.25■□□□□ 0.83
IFT20-206ENST00000578122 C5P01031 1676 aa20.25■□□□□ 0.83
IFT20-206ENST00000578122 PTCD1O75127 700 aaKnown RBP20.24■□□□□ 0.83
IFT20-206ENST00000578122 ANO8Q9HCE9 1232 aaPredicted RBP20.24■□□□□ 0.83
IFT20-206ENST00000578122 BTBD11A6QL63 1104 aa20.23■□□□□ 0.83
IFT20-206ENST00000578122 HMGB2P26583 209 aaKnown RBP20.23■□□□□ 0.83
IFT20-206ENST00000578122 ATP6V1AP38606 617 aa20.23■□□□□ 0.83
IFT20-206ENST00000578122 TAF7Q15545 349 aaPredicted RBP20.23■□□□□ 0.83
IFT20-206ENST00000578122 STK32BQ9NY57 414 aa20.23■□□□□ 0.83
IFT20-206ENST00000578122 ZNF831Q5JPB2 1677 aa20.22■□□□□ 0.83
IFT20-206ENST00000578122 UBR2Q8IWV8 1755 aa20.22■□□□□ 0.83
IFT20-206ENST00000578122 R3HDM1Q15032 1099 aaKnown RBP20.22■□□□□ 0.83
IFT20-206ENST00000578122 TTC5Q8N0Z6 440 aa20.22■□□□□ 0.83
IFT20-206ENST00000578122 TRIM35Q9UPQ4 493 aa20.22■□□□□ 0.83
IFT20-206ENST00000578122 PSDA5PKW4 1024 aaPredicted RBP20.21■□□□□ 0.83
IFT20-206ENST00000578122 ITPK1Q13572 414 aa20.21■□□□□ 0.83
IFT20-206ENST00000578122 ZNF790Q6PG37 636 aa20.21■□□□□ 0.83
IFT20-206ENST00000578122 SLC4A9Q96Q91 983 aa20.21■□□□□ 0.83
IFT20-206ENST00000578122 SLC15A2Q16348 729 aa20.2■□□□□ 0.82
IFT20-206ENST00000578122 KCPQ6ZWJ8 1503 aa20.2■□□□□ 0.82
IFT20-206ENST00000578122 ZNF827Q17R98 1081 aa20.19■□□□□ 0.82
IFT20-206ENST00000578122 AKT1S1Q96B36 256 aa20.19■□□□□ 0.82
IFT20-206ENST00000578122 KCNQ3O43525 872 aa20.18■□□□□ 0.82
IFT20-206ENST00000578122 LINC00116Q8NCU8 138 aa20.18■□□□□ 0.82
IFT20-206ENST00000578122 MIS18AQ9NYP9 233 aa20.18■□□□□ 0.82
IFT20-206ENST00000578122 C4BP0C0L5 1744 aa20.18■□□□□ 0.82
IFT20-206ENST00000578122 TJP1Q07157 1748 aa20.18■□□□□ 0.82
IFT20-206ENST00000578122 COL5A3P25940 1745 aaPredicted RBP20.17■□□□□ 0.82
IFT20-206ENST00000578122 KDM3BQ7LBC6 1761 aa20.17■□□□□ 0.82
IFT20-206ENST00000578122 SENP3-EIF4A1A0A087X0R7 540 aa20.17■□□□□ 0.82
IFT20-206ENST00000578122 ZNF496Q96IT1 587 aaPredicted RBP20.17■□□□□ 0.82
IFT20-206ENST00000578122 CICQ96RK0 1608 aaPredicted RBP20.16■□□□□ 0.82
IFT20-206ENST00000578122 TUBGCP6Q96RT7 1819 aa20.16■□□□□ 0.82
IFT20-206ENST00000578122 FMNL2Q96PY5 1086 aa20.16■□□□□ 0.82
IFT20-206ENST00000578122 DNAJC10Q8IXB1 793 aa20.15■□□□□ 0.82
IFT20-206ENST00000578122 VSIG10Q8N0Z9 540 aa20.15■□□□□ 0.82
IFT20-206ENST00000578122 TFCP2L1Q9NZI6 479 aa20.15■□□□□ 0.82
IFT20-206ENST00000578122 QSER1Q2KHR3 1735 aa20.15■□□□□ 0.82
IFT20-206ENST00000578122 HEG1Q9ULI3 1381 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms