RNA–Protein interactions for RNA: ENST00000577828.5

LINC00511-204, long intergenic non-protein coding RNA 511, humanhuman

TSL 3 BASIC

Gene LINC00511, Length 538 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-204ENST00000577828 DCTN1Q14203 1278 aa13.25□□□□□ -0.29
LINC00511-204ENST00000577828 CFAP44Q96MT7 982 aa13.25□□□□□ -0.29
LINC00511-204ENST00000577828 LGR6Q9HBX8 967 aa13.25□□□□□ -0.29
LINC00511-204ENST00000577828 THUMPD2Q9BTF0 503 aaKnown RBP13.24□□□□□ -0.29
LINC00511-204ENST00000577828 DOT1LQ8TEK3 1739 aa13.24□□□□□ -0.29
LINC00511-204ENST00000577828 TOGARAM1Q9Y4F4 1720 aa13.23□□□□□ -0.29
LINC00511-204ENST00000577828 SENP3-EIF4A1A0A087X0R7 540 aa13.23□□□□□ -0.29
LINC00511-204ENST00000577828 BTBD11A6QL63 1104 aa13.23□□□□□ -0.29
LINC00511-204ENST00000577828 TSPYL4Q9UJ04 414 aa13.23□□□□□ -0.29
LINC00511-204ENST00000577828 NHSQ6T4R5 1651 aa13.23□□□□□ -0.29
LINC00511-204ENST00000577828 BRWD3Q6RI45 1802 aa13.23□□□□□ -0.29
LINC00511-204ENST00000577828 SIPA1L3O60292 1781 aaPredicted RBP13.22□□□□□ -0.29
LINC00511-204ENST00000577828 CHL1O00533 1208 aa13.22□□□□□ -0.29
LINC00511-204ENST00000577828 ZNF853P0CG23 659 aa13.22□□□□□ -0.29
LINC00511-204ENST00000577828 EN1Q05925 392 aaPredicted RBP13.22□□□□□ -0.29
LINC00511-204ENST00000577828 NFATC2IPQ8NCF5 419 aa13.22□□□□□ -0.29
LINC00511-204ENST00000577828 SYTL4Q96C24 671 aaPredicted RBP13.22□□□□□ -0.29
LINC00511-204ENST00000577828 VIRMAQ69YN4 1812 aaKnown RBP13.21□□□□□ -0.29
LINC00511-204ENST00000577828 PRIM1P49642 420 aaKnown RBP13.21□□□□□ -0.29
LINC00511-204ENST00000577828 SLFN5Q08AF3 891 aa13.21□□□□□ -0.29
LINC00511-204ENST00000577828 TTC5Q8N0Z6 440 aa13.21□□□□□ -0.29
LINC00511-204ENST00000577828 LAS1LQ9Y4W2 734 aaKnown RBP13.21□□□□□ -0.29
LINC00511-204ENST00000577828 SOS1Q07889 1333 aaPredicted RBP13.2□□□□□ -0.3
LINC00511-204ENST00000577828 FANCIQ9NVI1 1328 aa13.2□□□□□ -0.3
LINC00511-204ENST00000577828 FAM182BQ5T319 152 aa13.2□□□□□ -0.3
LINC00511-204ENST00000577828 SMARCC1Q92922 1105 aaPredicted RBP13.2□□□□□ -0.3
LINC00511-204ENST00000577828 CHMP4AQ9BY43 222 aa13.2□□□□□ -0.3
LINC00511-204ENST00000577828 BCL11BQ9C0K0 894 aaPredicted RBP13.2□□□□□ -0.3
LINC00511-204ENST00000577828 PAPPAQ13219 1627 aa13.2□□□□□ -0.3
LINC00511-204ENST00000577828 TRIM37O94972 964 aa13.19□□□□□ -0.3
LINC00511-204ENST00000577828 APBA3O96018 575 aa13.19□□□□□ -0.3
LINC00511-204ENST00000577828 HMGB2P26583 209 aaKnown RBP13.19□□□□□ -0.3
LINC00511-204ENST00000577828 ZNF790Q6PG37 636 aa13.19□□□□□ -0.3
LINC00511-204ENST00000577828 PIGBQ92521 554 aa13.19□□□□□ -0.3
LINC00511-204ENST00000577828 ACSBG1Q96GR2 724 aa13.19□□□□□ -0.3
LINC00511-204ENST00000577828 MBIPQ9NS73 344 aa13.19□□□□□ -0.3
LINC00511-204ENST00000577828 KDM3BQ7LBC6 1761 aa13.19□□□□□ -0.3
LINC00511-204ENST00000577828 PSDA5PKW4 1024 aaPredicted RBP13.18□□□□□ -0.3
LINC00511-204ENST00000577828 CT47B1P0C2W7 299 aaPredicted RBP13.18□□□□□ -0.3
LINC00511-204ENST00000577828 TRMT2AQ8IZ69 625 aaKnown RBP13.18□□□□□ -0.3
LINC00511-204ENST00000577828 ITGB4P16144 1822 aa13.18□□□□□ -0.3
LINC00511-204ENST00000577828 HOXB7P09629 217 aa13.17□□□□□ -0.3
LINC00511-204ENST00000577828 NBPF14Q5TI25 921 aa13.17□□□□□ -0.3
LINC00511-204ENST00000577828 FMNL2Q96PY5 1086 aa13.17□□□□□ -0.3
LINC00511-204ENST00000577828 CAMKK2Q96RR4 588 aa13.17□□□□□ -0.3
LINC00511-204ENST00000577828 SBF2Q86WG5 1849 aa13.16□□□□□ -0.3
LINC00511-204ENST00000577828 R3HDM1Q15032 1099 aaKnown RBP13.16□□□□□ -0.3
LINC00511-204ENST00000577828 EZH2Q15910 746 aaKnown RBP13.16□□□□□ -0.3
LINC00511-204ENST00000577828 DUSP27Q5VZP5 1158 aa13.16□□□□□ -0.3
LINC00511-204ENST00000577828 VSIG10Q8N0Z9 540 aa13.16□□□□□ -0.3
LINC00511-204ENST00000577828 TSR2Q969E8 191 aaKnown RBP13.16□□□□□ -0.3
LINC00511-204ENST00000577828 ZNF428Q96B54 188 aa13.16□□□□□ -0.3
LINC00511-204ENST00000577828 CDCA7LQ96GN5 454 aa13.16□□□□□ -0.3
LINC00511-204ENST00000577828 UBR2Q8IWV8 1755 aa13.15□□□□□ -0.3
LINC00511-204ENST00000577828 KCNQ2O43526 872 aa13.15□□□□□ -0.3
LINC00511-204ENST00000577828 EIF4A1P60842 406 aaKnown RBP13.15□□□□□ -0.3
LINC00511-204ENST00000577828 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.3
LINC00511-204ENST00000577828 ATG3Q9NT62 314 aa13.15□□□□□ -0.3
LINC00511-204ENST00000577828 MIS18AQ9NYP9 233 aa13.15□□□□□ -0.3
LINC00511-204ENST00000577828 PALLDQ8WX93 1383 aa13.15□□□□□ -0.3
LINC00511-204ENST00000577828 KCPQ6ZWJ8 1503 aa13.14□□□□□ -0.31
LINC00511-204ENST00000577828 BTAF1O14981 1849 aa13.14□□□□□ -0.31
LINC00511-204ENST00000577828 CENPBP07199 599 aaPredicted RBP13.14□□□□□ -0.31
LINC00511-204ENST00000577828 TEX13AQ9BXU3 409 aaPredicted RBP13.14□□□□□ -0.31
LINC00511-204ENST00000577828 ASAP1Q9ULH1 1129 aa13.14□□□□□ -0.31
LINC00511-204ENST00000577828 LRP5O75197 1615 aa13.13□□□□□ -0.31
LINC00511-204ENST00000577828 ZNF831Q5JPB2 1677 aa13.13□□□□□ -0.31
LINC00511-204ENST00000577828 HEG1Q9ULI3 1381 aa13.13□□□□□ -0.31
LINC00511-204ENST00000577828 SNRPA1P09661 255 aaKnown RBP13.13□□□□□ -0.31
LINC00511-204ENST00000577828 SLC39A6Q13433 755 aa13.13□□□□□ -0.31
LINC00511-204ENST00000577828 CICQ96RK0 1608 aaPredicted RBP13.13□□□□□ -0.31
LINC00511-204ENST00000577828 RGPD3A6NKT7 1758 aaPredicted RBP13.12□□□□□ -0.31
LINC00511-204ENST00000577828 RGPD4Q7Z3J3 1758 aa13.12□□□□□ -0.31
LINC00511-204ENST00000577828 EXOSC9Q06265 439 aaKnown RBP13.12□□□□□ -0.31
LINC00511-204ENST00000577828 TWISTNBQ3B726 338 aaPredicted RBP13.12□□□□□ -0.31
LINC00511-204ENST00000577828 ZNF496Q96IT1 587 aaPredicted RBP13.12□□□□□ -0.31
LINC00511-204ENST00000577828 LOC102724428A0A0B4J2F2 783 aa13.11□□□□□ -0.31
LINC00511-204ENST00000577828 PLSCR1O15162 318 aa13.11□□□□□ -0.31
LINC00511-204ENST00000577828 PTCD1O75127 700 aaKnown RBP13.11□□□□□ -0.31
LINC00511-204ENST00000577828 GIGYF1O75420 1035 aaPredicted RBP13.11□□□□□ -0.31
LINC00511-204ENST00000577828 SIK1P57059 783 aa13.11□□□□□ -0.31
LINC00511-204ENST00000577828 SLC27A3Q5K4L6 730 aa13.11□□□□□ -0.31
LINC00511-204ENST00000577828 TNS1Q9HBL0 1735 aaKnown RBP13.1□□□□□ -0.31
LINC00511-204ENST00000577828 KCNQ3O43525 872 aa13.1□□□□□ -0.31
LINC00511-204ENST00000577828 STARD3NLO95772 234 aa13.1□□□□□ -0.31
LINC00511-204ENST00000577828 C8orf58Q8NAV2 365 aa13.1□□□□□ -0.31
LINC00511-204ENST00000577828 RBM42Q9BTD8 480 aaKnown RBP13.1□□□□□ -0.31
LINC00511-204ENST00000577828 ERBB4Q15303 1308 aa13.1□□□□□ -0.31
LINC00511-204ENST00000577828 LY75O60449 1722 aa13.09□□□□□ -0.31
LINC00511-204ENST00000577828 CCDC30Q5VVM6 783 aa13.09□□□□□ -0.31
LINC00511-204ENST00000577828 KAT6BQ8WYB5 2073 aa13.09□□□□□ -0.31
LINC00511-204ENST00000577828 LAMB4A4D0S4 1761 aa13.09□□□□□ -0.31
LINC00511-204ENST00000577828 ATP6V1AP38606 617 aa13.08□□□□□ -0.32
LINC00511-204ENST00000577828 ALDH1L2Q3SY69 923 aa13.08□□□□□ -0.32
LINC00511-204ENST00000577828 HDGFL1Q5TGJ6 251 aa13.08□□□□□ -0.32
LINC00511-204ENST00000577828 STK31Q9BXU1 1019 aa13.08□□□□□ -0.32
LINC00511-204ENST00000577828 CCNL1Q9UK58 526 aaPredicted RBP13.08□□□□□ -0.32
LINC00511-204ENST00000577828 VAMP4O75379 141 aa13.07□□□□□ -0.32
LINC00511-204ENST00000577828 PTF1AQ7RTS3 328 aa13.07□□□□□ -0.32
LINC00511-204ENST00000577828 C5P01031 1676 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms