RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 ERVV-2B6SEH9 535 aa17.16■□□□□ 0.34
CDK5RAP3-205ENST00000577802 FAM98CQ17RN3 349 aaKnown RBP17.16■□□□□ 0.34
CDK5RAP3-205ENST00000577802 DDX54Q8TDD1 881 aaKnown RBP17.16■□□□□ 0.34
CDK5RAP3-205ENST00000577802 TSR2Q969E8 191 aaKnown RBP17.16■□□□□ 0.34
CDK5RAP3-205ENST00000577802 SLC52A2Q9HAB3 445 aa17.16■□□□□ 0.34
CDK5RAP3-205ENST00000577802 RCAN3Q9UKA8 241 aa17.16■□□□□ 0.34
CDK5RAP3-205ENST00000577802 PAPPAQ13219 1627 aa17.16■□□□□ 0.34
CDK5RAP3-205ENST00000577802 CABP4P57796 275 aa17.14■□□□□ 0.33
CDK5RAP3-205ENST00000577802 BTBD11A6QL63 1104 aa17.13■□□□□ 0.33
CDK5RAP3-205ENST00000577802 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.13■□□□□ 0.33
CDK5RAP3-205ENST00000577802 QTRT2Q9H974 415 aaKnown RBP17.13■□□□□ 0.33
CDK5RAP3-205ENST00000577802 LGR6Q9HBX8 967 aa17.13■□□□□ 0.33
CDK5RAP3-205ENST00000577802 NEFLP07196 543 aa17.12■□□□□ 0.33
CDK5RAP3-205ENST00000577802 EXOSC9Q06265 439 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP3-205ENST00000577802 UBR2Q8IWV8 1755 aa17.11■□□□□ 0.33
CDK5RAP3-205ENST00000577802 HOXB7P09629 217 aa17.11■□□□□ 0.33
CDK5RAP3-205ENST00000577802 TTC5Q8N0Z6 440 aa17.11■□□□□ 0.33
CDK5RAP3-205ENST00000577802 TMOD3Q9NYL9 352 aa17.11■□□□□ 0.33
CDK5RAP3-205ENST00000577802 ITGB4P16144 1822 aa17.1■□□□□ 0.33
CDK5RAP3-205ENST00000577802 ONECUT3O60422 494 aaPredicted RBP17.1■□□□□ 0.33
CDK5RAP3-205ENST00000577802 RBM6P78332 1123 aaKnown RBP17.1■□□□□ 0.33
CDK5RAP3-205ENST00000577802 TWISTNBQ3B726 338 aaPredicted RBP17.1■□□□□ 0.33
CDK5RAP3-205ENST00000577802 BCL9O00512 1426 aa17.1■□□□□ 0.33
CDK5RAP3-205ENST00000577802 LAMB4A4D0S4 1761 aa17.1■□□□□ 0.33
CDK5RAP3-205ENST00000577802 ALDH1L2Q3SY69 923 aa17.09■□□□□ 0.33
CDK5RAP3-205ENST00000577802 NHSQ6T4R5 1651 aa17.09■□□□□ 0.33
CDK5RAP3-205ENST00000577802 KIF16BQ96L93 1317 aa17.08■□□□□ 0.32
CDK5RAP3-205ENST00000577802 NFATC2IPQ8NCF5 419 aa17.07■□□□□ 0.32
CDK5RAP3-205ENST00000577802 ZNF790Q6PG37 636 aa17.06■□□□□ 0.32
CDK5RAP3-205ENST00000577802 MARCH10Q8NA82 808 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-205ENST00000577802 CANXP27824 592 aaKnown RBP17.05■□□□□ 0.32
CDK5RAP3-205ENST00000577802 RARSP54136 660 aaKnown RBP17.05■□□□□ 0.32
CDK5RAP3-205ENST00000577802 SEPT12Q8IYM1 358 aa17.05■□□□□ 0.32
CDK5RAP3-205ENST00000577802 FMNL2Q96PY5 1086 aa17.05■□□□□ 0.32
CDK5RAP3-205ENST00000577802 SMC4Q9NTJ3 1288 aa17.05■□□□□ 0.32
CDK5RAP3-205ENST00000577802 SUPT16HQ9Y5B9 1047 aaKnown RBP17.05■□□□□ 0.32
CDK5RAP3-205ENST00000577802 RNF123Q5XPI4 1314 aa17.04■□□□□ 0.32
CDK5RAP3-205ENST00000577802 RRP1P56182 461 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP3-205ENST00000577802 EIF4A1P60842 406 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP3-205ENST00000577802 PPP4R3CPQ6ZMV5 832 aa17.04■□□□□ 0.32
CDK5RAP3-205ENST00000577802 STK31Q9BXU1 1019 aa17.04■□□□□ 0.32
CDK5RAP3-205ENST00000577802 MIS18AQ9NYP9 233 aa17.04■□□□□ 0.32
CDK5RAP3-205ENST00000577802 KCPQ6ZWJ8 1503 aa17.04■□□□□ 0.32
CDK5RAP3-205ENST00000577802 CICQ96RK0 1608 aaPredicted RBP17.03■□□□□ 0.32
CDK5RAP3-205ENST00000577802 MS4A1P11836 297 aa17.03■□□□□ 0.32
CDK5RAP3-205ENST00000577802 RXRBP28702 533 aa17.03■□□□□ 0.32
CDK5RAP3-205ENST00000577802 CCDC30Q5VVM6 783 aa17.03■□□□□ 0.32
CDK5RAP3-205ENST00000577802 C8orf58Q8NAV2 365 aa17.03■□□□□ 0.32
CDK5RAP3-205ENST00000577802 CACNA1FO60840 1977 aa17.02■□□□□ 0.32
CDK5RAP3-205ENST00000577802 C5P01031 1676 aa17.02■□□□□ 0.32
CDK5RAP3-205ENST00000577802 VAMP4O75379 141 aa17.02■□□□□ 0.32
CDK5RAP3-205ENST00000577802 SYTL4Q96C24 671 aaPredicted RBP17.02■□□□□ 0.32
CDK5RAP3-205ENST00000577802 HEG1Q9ULI3 1381 aa17.02■□□□□ 0.31
CDK5RAP3-205ENST00000577802 ZNF831Q5JPB2 1677 aa17.01■□□□□ 0.31
CDK5RAP3-205ENST00000577802 BRWD3Q6RI45 1802 aa17.01■□□□□ 0.31
CDK5RAP3-205ENST00000577802 IPO8O15397 1037 aaKnown RBP17.01■□□□□ 0.31
CDK5RAP3-205ENST00000577802 BRPF1P55201 1214 aaPredicted RBP17.01■□□□□ 0.31
CDK5RAP3-205ENST00000577802 SNRPA1P09661 255 aaKnown RBP17■□□□□ 0.31
CDK5RAP3-205ENST00000577802 HDGFL1Q5TGJ6 251 aa17■□□□□ 0.31
CDK5RAP3-205ENST00000577802 KRT27Q7Z3Y8 459 aa17■□□□□ 0.31
CDK5RAP3-205ENST00000577802 TSPYL6Q8N831 410 aa17■□□□□ 0.31
CDK5RAP3-205ENST00000577802 SMARCC1Q92922 1105 aaPredicted RBP17■□□□□ 0.31
CDK5RAP3-205ENST00000577802 RGS12O14924 1447 aa16.99■□□□□ 0.31
CDK5RAP3-205ENST00000577802 SBF2Q86WG5 1849 aa16.99■□□□□ 0.31
CDK5RAP3-205ENST00000577802 ELL2O00472 640 aaPredicted RBP16.99■□□□□ 0.31
CDK5RAP3-205ENST00000577802 VSIG10Q8N0Z9 540 aa16.99■□□□□ 0.31
CDK5RAP3-205ENST00000577802 PIGBQ92521 554 aa16.99■□□□□ 0.31
CDK5RAP3-205ENST00000577802 GIGYF1O75420 1035 aaPredicted RBP16.98■□□□□ 0.31
CDK5RAP3-205ENST00000577802 PRIM1P49642 420 aaKnown RBP16.98■□□□□ 0.31
CDK5RAP3-205ENST00000577802 SLC39A6Q13433 755 aa16.98■□□□□ 0.31
CDK5RAP3-205ENST00000577802 FAM196AQ6ZSG2 479 aa16.98■□□□□ 0.31
CDK5RAP3-205ENST00000577802 SSH1Q8WYL5 1049 aa16.98■□□□□ 0.31
CDK5RAP3-205ENST00000577802 TEX13AQ9BXU3 409 aaPredicted RBP16.98■□□□□ 0.31
CDK5RAP3-205ENST00000577802 BTAF1O14981 1849 aa16.98■□□□□ 0.31
CDK5RAP3-205ENST00000577802 PTPRCP08575 1304 aa16.97■□□□□ 0.31
CDK5RAP3-205ENST00000577802 ERBB4Q15303 1308 aa16.97■□□□□ 0.31
CDK5RAP3-205ENST00000577802 KRT24Q2M2I5 525 aa16.97■□□□□ 0.31
CDK5RAP3-205ENST00000577802 ZKSCAN2Q63HK3 967 aa16.97■□□□□ 0.31
CDK5RAP3-205ENST00000577802 ZNF496Q96IT1 587 aaPredicted RBP16.97■□□□□ 0.31
CDK5RAP3-205ENST00000577802 KCNQ3O43525 872 aa16.96■□□□□ 0.31
CDK5RAP3-205ENST00000577802 BCAR3O75815 825 aa16.96■□□□□ 0.31
CDK5RAP3-205ENST00000577802 ERICH6BQ5W0A0 696 aa16.96■□□□□ 0.31
CDK5RAP3-205ENST00000577802 BCL2L13Q9BXK5 485 aa16.96■□□□□ 0.31
CDK5RAP3-205ENST00000577802 DBF4Q9UBU7 674 aaPredicted RBP16.96■□□□□ 0.31
CDK5RAP3-205ENST00000577802 PALLDQ8WX93 1383 aa16.95■□□□□ 0.3
CDK5RAP3-205ENST00000577802 HMGB2P26583 209 aaKnown RBP16.95■□□□□ 0.3
CDK5RAP3-205ENST00000577802 PDE3AQ14432 1141 aa16.95■□□□□ 0.3
CDK5RAP3-205ENST00000577802 FTSJ3Q8IY81 847 aaKnown RBP16.95■□□□□ 0.3
CDK5RAP3-205ENST00000577802 ARHGAP45Q92619 1136 aa16.95■□□□□ 0.3
CDK5RAP3-205ENST00000577802 FRAT1Q92837 279 aaPredicted RBP16.95■□□□□ 0.3
CDK5RAP3-205ENST00000577802 ACSBG1Q96GR2 724 aa16.95■□□□□ 0.3
CDK5RAP3-205ENST00000577802 API5Q9BZZ5 524 aaKnown RBP16.95■□□□□ 0.3
CDK5RAP3-205ENST00000577802 ATG3Q9NT62 314 aa16.95■□□□□ 0.3
CDK5RAP3-205ENST00000577802 TJP1Q07157 1748 aa16.94■□□□□ 0.3
CDK5RAP3-205ENST00000577802 MRPL50Q8N5N7 158 aaKnown RBP16.94■□□□□ 0.3
CDK5RAP3-205ENST00000577802 PXDNLA1KZ92 1463 aa16.93■□□□□ 0.3
CDK5RAP3-205ENST00000577802 ASAP1Q9ULH1 1129 aa16.93■□□□□ 0.3
CDK5RAP3-205ENST00000577802 N4BP2Q86UW6 1770 aaPredicted RBP16.92■□□□□ 0.3
CDK5RAP3-205ENST00000577802 PTCD1O75127 700 aaKnown RBP16.92■□□□□ 0.3
CDK5RAP3-205ENST00000577802 STARD3NLO95772 234 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms