RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 USP35Q9P2H5 1018 aa9.69□□□□□ -0.86
CASC3-205ENST00000577605 RTL1A6NKG5 1358 aa9.68□□□□□ -0.86
CASC3-205ENST00000577605 C2orf72A6NCS6 295 aa9.68□□□□□ -0.86
CASC3-205ENST00000577605 GTPBP6O43824 516 aaPredicted RBP9.68□□□□□ -0.86
CASC3-205ENST00000577605 AMPHP49418 695 aa9.68□□□□□ -0.86
CASC3-205ENST00000577605 ERBB3P21860 1342 aa9.67□□□□□ -0.86
CASC3-205ENST00000577605 EXOC5O00471 708 aa9.67□□□□□ -0.86
CASC3-205ENST00000577605 KIF3CO14782 793 aa9.67□□□□□ -0.86
CASC3-205ENST00000577605 BAG6P46379 1132 aa9.67□□□□□ -0.86
CASC3-205ENST00000577605 DDB1Q16531 1140 aa9.67□□□□□ -0.86
CASC3-205ENST00000577605 MARVELD3Q96A59 401 aa9.67□□□□□ -0.86
CASC3-205ENST00000577605 CARD14Q9BXL6 1004 aa9.67□□□□□ -0.86
CASC3-205ENST00000577605 NSD2O96028 1365 aa9.66□□□□□ -0.86
CASC3-205ENST00000577605 MAP3K19Q56UN5 1328 aa9.66□□□□□ -0.86
CASC3-205ENST00000577605 DOK7Q18PE1 504 aa9.66□□□□□ -0.86
CASC3-205ENST00000577605 ANKRD24Q8TF21 1146 aa9.66□□□□□ -0.86
CASC3-205ENST00000577605 GGNBP2Q9H3C7 697 aa9.66□□□□□ -0.86
CASC3-205ENST00000577605 NSD3Q9BZ95 1437 aa9.65□□□□□ -0.86
CASC3-205ENST00000577605 THSD7AQ9UPZ6 1657 aa9.65□□□□□ -0.86
CASC3-205ENST00000577605 HOXC9P31274 260 aa9.65□□□□□ -0.86
CASC3-205ENST00000577605 ZNF710Q8N1W2 664 aa9.65□□□□□ -0.86
CASC3-205ENST00000577605 TMC2Q8TDI7 906 aa9.65□□□□□ -0.86
CASC3-205ENST00000577605 POLR3GLQ9BT43 218 aa9.65□□□□□ -0.86
CASC3-205ENST00000577605 NLRP2Q9NX02 1062 aa9.65□□□□□ -0.86
CASC3-205ENST00000577605 BCL9O00512 1426 aa9.65□□□□□ -0.87
CASC3-205ENST00000577605 SMG6Q86US8 1419 aaKnown RBP9.65□□□□□ -0.87
CASC3-205ENST00000577605 IL2RBP14784 551 aa9.64□□□□□ -0.87
CASC3-205ENST00000577605 PANK3Q9H999 370 aa9.64□□□□□ -0.87
CASC3-205ENST00000577605 KNSTRNQ9Y448 316 aa9.64□□□□□ -0.87
CASC3-205ENST00000577605 INSRP06213 1382 aa9.63□□□□□ -0.87
CASC3-205ENST00000577605 FLT4P35916 1363 aa9.63□□□□□ -0.87
CASC3-205ENST00000577605 PARD3Q8TEW0 1356 aa9.63□□□□□ -0.87
CASC3-205ENST00000577605 COL18A1P39060 1754 aa9.63□□□□□ -0.87
CASC3-205ENST00000577605 OVOS2A0A0G2JMS6 1433 aa9.63□□□□□ -0.87
CASC3-205ENST00000577605 DISP2A7MBM2 1401 aa9.63□□□□□ -0.87
CASC3-205ENST00000577605 RIMBP2O15034 1052 aa9.62□□□□□ -0.87
CASC3-205ENST00000577605 KIF7Q2M1P5 1343 aa9.61□□□□□ -0.87
CASC3-205ENST00000577605 WASHC2AQ641Q2 1341 aa9.61□□□□□ -0.87
CASC3-205ENST00000577605 HMGB2P26583 209 aaKnown RBP9.61□□□□□ -0.87
CASC3-205ENST00000577605 EMP3P54852 163 aa9.61□□□□□ -0.87
CASC3-205ENST00000577605 BRPF1P55201 1214 aaPredicted RBP9.61□□□□□ -0.87
CASC3-205ENST00000577605 PLSCR1O15162 318 aa9.6□□□□□ -0.87
CASC3-205ENST00000577605 TRIM37O94972 964 aa9.6□□□□□ -0.87
CASC3-205ENST00000577605 APBA3O96018 575 aa9.6□□□□□ -0.87
CASC3-205ENST00000577605 RRS1Q15050 365 aaKnown RBP9.6□□□□□ -0.87
CASC3-205ENST00000577605 PLEKHG2Q9H7P9 1386 aa9.6□□□□□ -0.87
CASC3-205ENST00000577605 PARP4Q9UKK3 1724 aaKnown RBP9.59□□□□□ -0.87
CASC3-205ENST00000577605 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.59□□□□□ -0.87
CASC3-205ENST00000577605 MORC1Q86VD1 984 aa9.59□□□□□ -0.87
CASC3-205ENST00000577605 MARCH10Q8NA82 808 aaPredicted RBP9.59□□□□□ -0.87
CASC3-205ENST00000577605 RAPGEF4Q8WZA2 1011 aa9.59□□□□□ -0.87
CASC3-205ENST00000577605 LTV1Q96GA3 475 aaPredicted RBP9.59□□□□□ -0.87
CASC3-205ENST00000577605 POLKQ9UBT6 870 aa9.59□□□□□ -0.87
CASC3-205ENST00000577605 MYOM1P52179 1685 aa9.58□□□□□ -0.88
CASC3-205ENST00000577605 TNS2Q63HR2 1409 aa9.58□□□□□ -0.88
CASC3-205ENST00000577605 HOXB1P14653 301 aaPredicted RBP9.58□□□□□ -0.88
CASC3-205ENST00000577605 TATP17735 454 aaPredicted RBP9.58□□□□□ -0.88
CASC3-205ENST00000577605 HSP90AB2PQ58FF8 381 aa9.58□□□□□ -0.88
CASC3-205ENST00000577605 FAM182BQ5T319 152 aa9.58□□□□□ -0.88
CASC3-205ENST00000577605 NBPF14Q5TI25 921 aa9.58□□□□□ -0.88
CASC3-205ENST00000577605 DEFB132Q7Z7B7 95 aa9.58□□□□□ -0.88
CASC3-205ENST00000577605 ZCRB1Q8TBF4 217 aaKnown RBP9.58□□□□□ -0.88
CASC3-205ENST00000577605 NPC1L1Q9UHC9 1359 aa9.58□□□□□ -0.88
CASC3-205ENST00000577605 PPM1GO15355 546 aaPredicted RBP9.57□□□□□ -0.88
CASC3-205ENST00000577605 FBLN1P23142 703 aa9.57□□□□□ -0.88
CASC3-205ENST00000577605 EN1Q05925 392 aaPredicted RBP9.57□□□□□ -0.88
CASC3-205ENST00000577605 NBPF6Q5VWK0 638 aa9.57□□□□□ -0.88
CASC3-205ENST00000577605 NBPF4Q96M43 638 aa9.57□□□□□ -0.88
CASC3-205ENST00000577605 CAMKK2Q96RR4 588 aa9.57□□□□□ -0.88
CASC3-205ENST00000577605 ZSWIM6Q9HCJ5 1215 aa9.57□□□□□ -0.88
CASC3-205ENST00000577605 GPHNQ9NQX3 736 aaPredicted RBP9.57□□□□□ -0.88
CASC3-205ENST00000577605 FAM208AQ9UK61 1670 aaKnown RBP9.57□□□□□ -0.88
CASC3-205ENST00000577605 BRWD3Q6RI45 1802 aa9.56□□□□□ -0.88
CASC3-205ENST00000577605 PER1O15534 1290 aaPredicted RBP9.56□□□□□ -0.88
CASC3-205ENST00000577605 EMILIN1Q9Y6C2 1016 aa9.56□□□□□ -0.88
CASC3-205ENST00000577605 RGPD1P0DJD0 1748 aa9.56□□□□□ -0.88
CASC3-205ENST00000577605 ZEB1P37275 1124 aaPredicted RBP9.55□□□□□ -0.88
CASC3-205ENST00000577605 GPR153Q6NV75 609 aa9.55□□□□□ -0.88
CASC3-205ENST00000577605 SPG7Q9UQ90 795 aa9.55□□□□□ -0.88
CASC3-205ENST00000577605 LTN1O94822 1766 aa9.55□□□□□ -0.88
CASC3-205ENST00000577605 KIF20BQ96Q89 1820 aa9.54□□□□□ -0.88
CASC3-205ENST00000577605 LRRC37A3O60309 1634 aa9.54□□□□□ -0.88
CASC3-205ENST00000577605 FAM205CA6NFA0 338 aa9.54□□□□□ -0.88
CASC3-205ENST00000577605 FOXK1P85037 733 aa9.54□□□□□ -0.88
CASC3-205ENST00000577605 DSG2Q14126 1118 aa9.54□□□□□ -0.88
CASC3-205ENST00000577605 EZH2Q15910 746 aaKnown RBP9.54□□□□□ -0.88
CASC3-205ENST00000577605 ARSIQ5FYB1 569 aa9.54□□□□□ -0.88
CASC3-205ENST00000577605 CDAN1Q8IWY9 1227 aa9.54□□□□□ -0.88
CASC3-205ENST00000577605 DDX54Q8TDD1 881 aaKnown RBP9.54□□□□□ -0.88
CASC3-205ENST00000577605 CRISPLD2Q9H0B8 497 aa9.54□□□□□ -0.88
CASC3-205ENST00000577605 PCDH10Q9P2E7 1040 aa9.54□□□□□ -0.88
CASC3-205ENST00000577605 NCAPD2Q15021 1401 aa9.54□□□□□ -0.88
CASC3-205ENST00000577605 PCDH11XQ9BZA7 1347 aa9.54□□□□□ -0.88
CASC3-205ENST00000577605 PCDH11YQ9BZA8 1340 aa9.54□□□□□ -0.88
CASC3-205ENST00000577605 TNNT2P45379 298 aaPredicted RBP9.53□□□□□ -0.88
CASC3-205ENST00000577605 EYA1Q99502 592 aa9.53□□□□□ -0.88
CASC3-205ENST00000577605 POTEB3A0JP26 581 aa9.52□□□□□ -0.89
CASC3-205ENST00000577605 EIF4A2Q14240 407 aaKnown RBP9.52□□□□□ -0.89
CASC3-205ENST00000577605 AMOTQ4VCS5 1084 aa9.52□□□□□ -0.89
CASC3-205ENST00000577605 POTEBQ6S5H4 581 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms