RNA–Protein interactions for RNA: ENST00000576523.1

NCBP3-206, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 249 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-206ENST00000576523 BCL9O00512 1426 aa11.69□□□□□ -0.54
NCBP3-206ENST00000576523 KDM6AO15550 1401 aaPredicted RBP11.69□□□□□ -0.54
NCBP3-206ENST00000576523 TUBGCP6Q96RT7 1819 aa11.68□□□□□ -0.54
NCBP3-206ENST00000576523 ZCRB1Q8TBF4 217 aaKnown RBP11.68□□□□□ -0.54
NCBP3-206ENST00000576523 RAPGEF4Q8WZA2 1011 aa11.68□□□□□ -0.54
NCBP3-206ENST00000576523 PHACTR3Q96KR7 559 aa11.68□□□□□ -0.54
NCBP3-206ENST00000576523 NUP188Q5SRE5 1749 aa11.68□□□□□ -0.54
NCBP3-206ENST00000576523 KDM3BQ7LBC6 1761 aa11.67□□□□□ -0.54
NCBP3-206ENST00000576523 EXOC5O00471 708 aa11.67□□□□□ -0.54
NCBP3-206ENST00000576523 U2AF1L5P0DN76 240 aaPredicted RBP11.67□□□□□ -0.54
NCBP3-206ENST00000576523 U2AF1Q01081 240 aaKnown RBP eCLIP11.67□□□□□ -0.54
NCBP3-206ENST00000576523 PTF1AQ7RTS3 328 aa11.67□□□□□ -0.54
NCBP3-206ENST00000576523 PLEKHF1Q96S99 279 aa11.67□□□□□ -0.54
NCBP3-206ENST00000576523 PRKAR2BP31323 418 aa11.66□□□□□ -0.54
NCBP3-206ENST00000576523 POLA2Q14181 598 aa11.66□□□□□ -0.54
NCBP3-206ENST00000576523 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.66□□□□□ -0.54
NCBP3-206ENST00000576523 PCDH11XQ9BZA7 1347 aa11.65□□□□□ -0.54
NCBP3-206ENST00000576523 PCDH11YQ9BZA8 1340 aa11.65□□□□□ -0.54
NCBP3-206ENST00000576523 MRC1P22897 1456 aa11.65□□□□□ -0.54
NCBP3-206ENST00000576523 PDE3BQ13370 1112 aa11.65□□□□□ -0.54
NCBP3-206ENST00000576523 MTHFSDQ2M296 383 aaKnown RBP11.65□□□□□ -0.54
NCBP3-206ENST00000576523 DDX54Q8TDD1 881 aaKnown RBP11.65□□□□□ -0.54
NCBP3-206ENST00000576523 PNISRQ8TF01 805 aaKnown RBP11.65□□□□□ -0.54
NCBP3-206ENST00000576523 ADAMTS8Q9UP79 889 aa11.65□□□□□ -0.54
NCBP3-206ENST00000576523 NUDCQ9Y266 331 aa11.65□□□□□ -0.54
NCBP3-206ENST00000576523 MYH14Q7Z406 1995 aaKnown RBP11.65□□□□□ -0.55
NCBP3-206ENST00000576523 COL5A3P25940 1745 aaPredicted RBP11.64□□□□□ -0.55
NCBP3-206ENST00000576523 FCHSD2O94868 740 aa11.64□□□□□ -0.55
NCBP3-206ENST00000576523 PHKG2P15735 406 aa11.64□□□□□ -0.55
NCBP3-206ENST00000576523 SLC24A3Q9HC58 644 aa11.64□□□□□ -0.55
NCBP3-206ENST00000576523 MRS2Q9HD23 443 aa11.64□□□□□ -0.55
NCBP3-206ENST00000576523 TJP1Q07157 1748 aa11.63□□□□□ -0.55
NCBP3-206ENST00000576523 KCNQ2O43526 872 aa11.63□□□□□ -0.55
NCBP3-206ENST00000576523 ZNF530Q6P9A1 599 aaPredicted RBP11.63□□□□□ -0.55
NCBP3-206ENST00000576523 CICQ96RK0 1608 aaPredicted RBP11.63□□□□□ -0.55
NCBP3-206ENST00000576523 C5P01031 1676 aa11.62□□□□□ -0.55
NCBP3-206ENST00000576523 ZNF831Q5JPB2 1677 aa11.62□□□□□ -0.55
NCBP3-206ENST00000576523 PLEKHO1Q53GL0 409 aaPredicted RBP11.62□□□□□ -0.55
NCBP3-206ENST00000576523 CCDC146Q8IYE0 955 aa11.62□□□□□ -0.55
NCBP3-206ENST00000576523 UPF1Q92900 1129 aaKnown RBP eCLIP11.62□□□□□ -0.55
NCBP3-206ENST00000576523 ACSBG1Q96GR2 724 aa11.62□□□□□ -0.55
NCBP3-206ENST00000576523 SPG7Q9UQ90 795 aa11.62□□□□□ -0.55
NCBP3-206ENST00000576523 AMOTQ4VCS5 1084 aa11.61□□□□□ -0.55
NCBP3-206ENST00000576523 FAM196AQ6ZSG2 479 aa11.61□□□□□ -0.55
NCBP3-206ENST00000576523 IFNL2Q8IZJ0 200 aa11.61□□□□□ -0.55
NCBP3-206ENST00000576523 MAP3K5Q99683 1374 aa11.6□□□□□ -0.55
NCBP3-206ENST00000576523 CCER2I3L3R5 266 aa11.6□□□□□ -0.55
NCBP3-206ENST00000576523 STK25O00506 426 aa11.6□□□□□ -0.55
NCBP3-206ENST00000576523 TRIM37O94972 964 aa11.6□□□□□ -0.55
NCBP3-206ENST00000576523 LGR6Q9HBX8 967 aa11.6□□□□□ -0.55
NCBP3-206ENST00000576523 SSUH2Q9Y2M2 353 aa11.6□□□□□ -0.55
NCBP3-206ENST00000576523 QSER1Q2KHR3 1735 aa11.6□□□□□ -0.55
NCBP3-206ENST00000576523 UBR3Q6ZT12 1888 aa11.59□□□□□ -0.55
NCBP3-206ENST00000576523 WDR43Q15061 677 aaKnown RBP eCLIP11.59□□□□□ -0.55
NCBP3-206ENST00000576523 AKAP4Q5JQC9 854 aa11.59□□□□□ -0.55
NCBP3-206ENST00000576523 MPRIPQ6WCQ1 1025 aa11.59□□□□□ -0.55
NCBP3-206ENST00000576523 WDR70Q9NW82 654 aa11.59□□□□□ -0.55
NCBP3-206ENST00000576523 LAMB4A4D0S4 1761 aa11.59□□□□□ -0.55
NCBP3-206ENST00000576523 CEMIPQ8WUJ3 1361 aa11.58□□□□□ -0.56
NCBP3-206ENST00000576523 RNMTO43148 476 aaKnown RBP11.58□□□□□ -0.56
NCBP3-206ENST00000576523 ZMYND10O75800 440 aa11.58□□□□□ -0.56
NCBP3-206ENST00000576523 PRIM1P49642 420 aaKnown RBP11.58□□□□□ -0.56
NCBP3-206ENST00000576523 IL17REQ8NFR9 667 aa11.58□□□□□ -0.56
NCBP3-206ENST00000576523 KCPQ6ZWJ8 1503 aa11.57□□□□□ -0.56
NCBP3-206ENST00000576523 SENP3-EIF4A1A0A087X0R7 540 aa11.57□□□□□ -0.56
NCBP3-206ENST00000576523 SOCS7O14512 581 aa11.57□□□□□ -0.56
NCBP3-206ENST00000576523 NFE2L2Q16236 605 aa11.57□□□□□ -0.56
NCBP3-206ENST00000576523 GAS2L2Q8NHY3 880 aa11.57□□□□□ -0.56
NCBP3-206ENST00000576523 ARHGEF1Q92888 912 aaKnown RBP11.57□□□□□ -0.56
NCBP3-206ENST00000576523 RUNDC1Q96C34 613 aa11.57□□□□□ -0.56
NCBP3-206ENST00000576523 BCL11BQ9C0K0 894 aaPredicted RBP11.57□□□□□ -0.56
NCBP3-206ENST00000576523 RRP7AQ9Y3A4 280 aaKnown RBP11.57□□□□□ -0.56
NCBP3-206ENST00000576523 GNAT3A8MTJ3 354 aa11.56□□□□□ -0.56
NCBP3-206ENST00000576523 TMPOP42166 694 aaKnown RBP11.56□□□□□ -0.56
NCBP3-206ENST00000576523 DCTN1Q14203 1278 aa11.56□□□□□ -0.56
NCBP3-206ENST00000576523 C1orf141Q5JVX7 400 aa11.56□□□□□ -0.56
NCBP3-206ENST00000576523 DEFB132Q7Z7B7 95 aa11.56□□□□□ -0.56
NCBP3-206ENST00000576523 PIGBQ92521 554 aa11.56□□□□□ -0.56
NCBP3-206ENST00000576523 DCAF5Q96JK2 942 aa11.56□□□□□ -0.56
NCBP3-206ENST00000576523 APAF1O14727 1248 aa11.55□□□□□ -0.56
NCBP3-206ENST00000576523 FAM9BQ8IZU0 186 aa11.55□□□□□ -0.56
NCBP3-206ENST00000576523 TRIM35Q9UPQ4 493 aa11.55□□□□□ -0.56
NCBP3-206ENST00000576523 C4BP0C0L5 1744 aa11.55□□□□□ -0.56
NCBP3-206ENST00000576523 CACNA1FO60840 1977 aa11.54□□□□□ -0.56
NCBP3-206ENST00000576523 ERVV-2B6SEH9 535 aa11.54□□□□□ -0.56
NCBP3-206ENST00000576523 MCM10Q7L590 875 aa11.54□□□□□ -0.56
NCBP3-206ENST00000576523 THUMPD2Q9BTF0 503 aaKnown RBP11.54□□□□□ -0.56
NCBP3-206ENST00000576523 C1orf115Q9H7X2 142 aa11.54□□□□□ -0.56
NCBP3-206ENST00000576523 C4AP0C0L4 1744 aa11.54□□□□□ -0.56
NCBP3-206ENST00000576523 MAPK8IP3Q9UPT6 1336 aa11.54□□□□□ -0.56
NCBP3-206ENST00000576523 TESPA1A2RU30 521 aaPredicted RBP11.53□□□□□ -0.56
NCBP3-206ENST00000576523 HSP90AB1P08238 724 aaKnown RBP11.53□□□□□ -0.56
NCBP3-206ENST00000576523 EN1Q05925 392 aaPredicted RBP11.53□□□□□ -0.56
NCBP3-206ENST00000576523 NFATC2IPQ8NCF5 419 aa11.53□□□□□ -0.56
NCBP3-206ENST00000576523 SYTL4Q96C24 671 aaPredicted RBP11.53□□□□□ -0.56
NCBP3-206ENST00000576523 CAMKK2Q96RR4 588 aa11.53□□□□□ -0.56
NCBP3-206ENST00000576523 SLC52A2Q9HAB3 445 aa11.53□□□□□ -0.56
NCBP3-206ENST00000576523 CASZ1Q86V15 1759 aa11.53□□□□□ -0.56
NCBP3-206ENST00000576523 SPDYE2BA6NHP3 402 aa11.52□□□□□ -0.57
NCBP3-206ENST00000576523 APBA3O96018 575 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms