RNA–Protein interactions for RNA: ENST00000574151.5

HCFC1R1-206, Transcript of host cell factor C1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC1R1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-206ENST00000574151 DALRD3Q5D0E6 543 aaKnown RBP13.96□□□□□ -0.17
HCFC1R1-206ENST00000574151 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.96□□□□□ -0.17
HCFC1R1-206ENST00000574151 CCDC87Q9NVE4 849 aa13.96□□□□□ -0.17
HCFC1R1-206ENST00000574151 RASSF7Q02833 373 aa13.95□□□□□ -0.18
HCFC1R1-206ENST00000574151 NSD3Q9BZ95 1437 aa13.95□□□□□ -0.18
HCFC1R1-206ENST00000574151 CENPJQ9HC77 1338 aaPredicted RBP13.94□□□□□ -0.18
HCFC1R1-206ENST00000574151 POTECB2RU33 542 aa13.94□□□□□ -0.18
HCFC1R1-206ENST00000574151 GNPATO15228 680 aa13.94□□□□□ -0.18
HCFC1R1-206ENST00000574151 LINC00116Q8NCU8 138 aa13.94□□□□□ -0.18
HCFC1R1-206ENST00000574151 FAM208AQ9UK61 1670 aaKnown RBP13.94□□□□□ -0.18
HCFC1R1-206ENST00000574151 C4AP0C0L4 1744 aa13.93□□□□□ -0.18
HCFC1R1-206ENST00000574151 TIAM2Q8IVF5 1701 aa13.93□□□□□ -0.18
HCFC1R1-206ENST00000574151 TMF1P82094 1093 aa13.92□□□□□ -0.18
HCFC1R1-206ENST00000574151 NBPF1Q3BBV0 1214 aa13.92□□□□□ -0.18
HCFC1R1-206ENST00000574151 CHADLQ6NUI6 762 aa13.92□□□□□ -0.18
HCFC1R1-206ENST00000574151 SIN3AQ96ST3 1273 aa13.92□□□□□ -0.18
HCFC1R1-206ENST00000574151 KTN1Q86UP2 1357 aaKnown RBP13.92□□□□□ -0.18
HCFC1R1-206ENST00000574151 TONSLQ96HA7 1378 aa13.92□□□□□ -0.18
HCFC1R1-206ENST00000574151 MEGF6O75095 1541 aa13.91□□□□□ -0.18
HCFC1R1-206ENST00000574151 CASP8AP2Q9UKL3 1982 aa13.91□□□□□ -0.18
HCFC1R1-206ENST00000574151 POTEIP0CG38 1075 aa13.91□□□□□ -0.18
HCFC1R1-206ENST00000574151 POTEJP0CG39 1038 aa13.91□□□□□ -0.18
HCFC1R1-206ENST00000574151 CHRNA5P30532 468 aa13.91□□□□□ -0.18
HCFC1R1-206ENST00000574151 NME9Q86XW9 330 aa13.91□□□□□ -0.18
HCFC1R1-206ENST00000574151 NLGN1Q8N2Q7 840 aa13.91□□□□□ -0.18
HCFC1R1-206ENST00000574151 PARP3Q9Y6F1 533 aa13.91□□□□□ -0.18
HCFC1R1-206ENST00000574151 MAP2P11137 1827 aaKnown RBP13.91□□□□□ -0.18
HCFC1R1-206ENST00000574151 SMARCC1Q92922 1105 aaPredicted RBP13.9□□□□□ -0.18
HCFC1R1-206ENST00000574151 ZC3H4Q9UPT8 1303 aaKnown RBP13.9□□□□□ -0.19
HCFC1R1-206ENST00000574151 IP6K1Q92551 441 aa13.89□□□□□ -0.19
HCFC1R1-206ENST00000574151 LMNB1P20700 586 aa13.88□□□□□ -0.19
HCFC1R1-206ENST00000574151 TRAPPC3LQ5T215 181 aa13.88□□□□□ -0.19
HCFC1R1-206ENST00000574151 MON2Q7Z3U7 1717 aa13.87□□□□□ -0.19
HCFC1R1-206ENST00000574151 LOC102724428A0A0B4J2F2 783 aa13.87□□□□□ -0.19
HCFC1R1-206ENST00000574151 SIK1P57059 783 aa13.87□□□□□ -0.19
HCFC1R1-206ENST00000574151 DPY19L2Q6NUT2 758 aa13.87□□□□□ -0.19
HCFC1R1-206ENST00000574151 USHBP1Q8N6Y0 703 aa13.87□□□□□ -0.19
HCFC1R1-206ENST00000574151 USP31Q70CQ4 1352 aa13.86□□□□□ -0.19
HCFC1R1-206ENST00000574151 TMEM88BA6NKF7 163 aa13.86□□□□□ -0.19
HCFC1R1-206ENST00000574151 ATP6V1AP38606 617 aa13.86□□□□□ -0.19
HCFC1R1-206ENST00000574151 MAP2K1Q02750 393 aaPredicted RBP13.86□□□□□ -0.19
HCFC1R1-206ENST00000574151 ITPK1Q13572 414 aa13.86□□□□□ -0.19
HCFC1R1-206ENST00000574151 EVC2Q86UK5 1308 aa13.86□□□□□ -0.19
HCFC1R1-206ENST00000574151 KDM6AO15550 1401 aaPredicted RBP13.85□□□□□ -0.19
HCFC1R1-206ENST00000574151 GYS1P13807 737 aa13.85□□□□□ -0.19
HCFC1R1-206ENST00000574151 PIGBQ92521 554 aa13.85□□□□□ -0.19
HCFC1R1-206ENST00000574151 TSKSQ9UJT2 592 aa13.85□□□□□ -0.19
HCFC1R1-206ENST00000574151 DICER1Q9UPY3 1922 aaKnown RBP13.85□□□□□ -0.19
HCFC1R1-206ENST00000574151 DEFB115Q30KQ5 88 aa13.84□□□□□ -0.19
HCFC1R1-206ENST00000574151 ARHGEF1Q92888 912 aaKnown RBP13.84□□□□□ -0.19
HCFC1R1-206ENST00000574151 MCOLN1Q9GZU1 580 aa13.84□□□□□ -0.19
HCFC1R1-206ENST00000574151 RTCBQ9Y3I0 505 aaKnown RBP13.84□□□□□ -0.19
HCFC1R1-206ENST00000574151 PASKQ96RG2 1323 aa13.84□□□□□ -0.19
HCFC1R1-206ENST00000574151 RAPGEF4Q8WZA2 1011 aa13.83□□□□□ -0.2
HCFC1R1-206ENST00000574151 L3MBTL2Q969R5 705 aa13.83□□□□□ -0.2
HCFC1R1-206ENST00000574151 WDR33Q9C0J8 1336 aaKnown RBP13.83□□□□□ -0.2
HCFC1R1-206ENST00000574151 RFC4P35249 363 aa13.82□□□□□ -0.2
HCFC1R1-206ENST00000574151 NBPF6Q5VWK0 638 aa13.82□□□□□ -0.2
HCFC1R1-206ENST00000574151 NBPF4Q96M43 638 aa13.82□□□□□ -0.2
HCFC1R1-206ENST00000574151 TATP17735 454 aaPredicted RBP13.81□□□□□ -0.2
HCFC1R1-206ENST00000574151 FBLN1P23142 703 aa13.81□□□□□ -0.2
HCFC1R1-206ENST00000574151 BEGAINQ9BUH8 593 aa13.81□□□□□ -0.2
HCFC1R1-206ENST00000574151 PCDH11XQ9BZA7 1347 aa13.81□□□□□ -0.2
HCFC1R1-206ENST00000574151 PCDH11YQ9BZA8 1340 aa13.81□□□□□ -0.2
HCFC1R1-206ENST00000574151 CYP27B1O15528 508 aa13.8□□□□□ -0.2
HCFC1R1-206ENST00000574151 HOXC9P31274 260 aa13.8□□□□□ -0.2
HCFC1R1-206ENST00000574151 AMPHP49418 695 aa13.8□□□□□ -0.2
HCFC1R1-206ENST00000574151 PRPF38BQ5VTL8 546 aaKnown RBP13.8□□□□□ -0.2
HCFC1R1-206ENST00000574151 ASAP1Q9ULH1 1129 aa13.8□□□□□ -0.2
HCFC1R1-206ENST00000574151 DDNO94850 711 aaPredicted RBP13.79□□□□□ -0.2
HCFC1R1-206ENST00000574151 GRM1Q13255 1194 aa13.79□□□□□ -0.2
HCFC1R1-206ENST00000574151 MYH14Q7Z406 1995 aaKnown RBP13.79□□□□□ -0.2
HCFC1R1-206ENST00000574151 CGNL1Q0VF96 1302 aa13.79□□□□□ -0.2
HCFC1R1-206ENST00000574151 RASSF10A6NK89 507 aa13.78□□□□□ -0.2
HCFC1R1-206ENST00000574151 ITGBL1O95965 494 aaPredicted RBP13.78□□□□□ -0.2
HCFC1R1-206ENST00000574151 DGKZQ13574 1117 aa13.78□□□□□ -0.2
HCFC1R1-206ENST00000574151 ABT1Q9ULW3 272 aaKnown RBP13.78□□□□□ -0.2
HCFC1R1-206ENST00000574151 SOX10P56693 466 aa13.77□□□□□ -0.21
HCFC1R1-206ENST00000574151 DDR1Q08345 913 aa13.77□□□□□ -0.21
HCFC1R1-206ENST00000574151 ERFEQ4G0M1 354 aa13.77□□□□□ -0.21
HCFC1R1-206ENST00000574151 MAP3K19Q56UN5 1328 aa13.77□□□□□ -0.21
HCFC1R1-206ENST00000574151 PAXIP1Q6ZW49 1069 aaPredicted RBP13.77□□□□□ -0.21
HCFC1R1-206ENST00000574151 ZNF219Q9P2Y4 722 aaPredicted RBP13.77□□□□□ -0.21
HCFC1R1-206ENST00000574151 SBNO2Q9Y2G9 1366 aa13.77□□□□□ -0.21
HCFC1R1-206ENST00000574151 NFKBIEO00221 500 aa13.76□□□□□ -0.21
HCFC1R1-206ENST00000574151 FKBP8Q14318 412 aa13.76□□□□□ -0.21
HCFC1R1-206ENST00000574151 LDHDQ86WU2 507 aa13.76□□□□□ -0.21
HCFC1R1-206ENST00000574151 SRP68Q9UHB9 627 aaKnown RBP13.76□□□□□ -0.21
HCFC1R1-206ENST00000574151 CLEC11AQ9Y240 323 aa13.76□□□□□ -0.21
HCFC1R1-206ENST00000574151 SCN4AP35499 1836 aa13.76□□□□□ -0.21
HCFC1R1-206ENST00000574151 AFDNP55196 1824 aaKnown RBP13.76□□□□□ -0.21
HCFC1R1-206ENST00000574151 EAPPQ56P03 285 aaPredicted RBP13.75□□□□□ -0.21
HCFC1R1-206ENST00000574151 TMOD3Q9NYL9 352 aa13.75□□□□□ -0.21
HCFC1R1-206ENST00000574151 CD163L1Q9NR16 1453 aa13.74□□□□□ -0.21
HCFC1R1-206ENST00000574151 DLEC1Q9Y238 1755 aa13.74□□□□□ -0.21
HCFC1R1-206ENST00000574151 ADRA2BP18089 450 aa13.74□□□□□ -0.21
HCFC1R1-206ENST00000574151 TMC1Q8TDI8 760 aa13.74□□□□□ -0.21
HCFC1R1-206ENST00000574151 RBM42Q9BTD8 480 aaKnown RBP13.74□□□□□ -0.21
HCFC1R1-206ENST00000574151 RPS6KA4O75676 772 aa13.73□□□□□ -0.21
HCFC1R1-206ENST00000574151 TTLL6Q8N841 843 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms