RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 CFAP100Q494V2 611 aa18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 CYP46A1Q9Y6A2 500 aa18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 RPUSD2Q8IZ73 545 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 FBF1Q8TES7 1133 aa18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 FSD2A1L4K1 749 aa18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 KANK4Q5T7N3 995 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 CIZ1Q9ULV3 898 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 ERCC5P28715 1186 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 SOGA1O94964 1423 aa18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 CWC27Q6UX04 472 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 PDCP20941 246 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 CUL5Q93034 780 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 SEPT10Q9P0V9 454 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 SMG6Q86US8 1419 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 PHLDB1Q86UU1 1377 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 HIP1O00291 1037 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 CKAP2LQ8IYA6 745 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 MTHFSP49914 203 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 LARP1BQ659C4 914 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 SLU7O95391 586 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 CCDC192P0DO97 292 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 SYCP3Q8IZU3 236 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 SMC1BQ8NDV3 1235 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 GPRASP1Q5JY77 1395 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 NOP2P46087 812 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 GTPBP4Q9BZE4 634 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 MAP7D1Q3KQU3 841 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 TDRD12Q587J7 1177 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 PLEKHO1Q53GL0 409 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 TSG101Q99816 390 aa18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 IGHMBP2P38935 993 aaKnown RBP18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 CPLX3Q8WVH0 158 aa18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 PRC1O43663 620 aa18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 TCERG1LQ5VWI1 586 aa18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 CCDC144CPQ8IYA2 1237 aa18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 PFDN4Q9NQP4 134 aa18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 BIN2Q9UBW5 565 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 IKBKGQ9Y6K9 419 aa18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 SEPT14Q6ZU15 432 aa18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 AACSQ86V21 672 aa18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 CBFA2T2O43439 604 aa18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 PDE1CQ14123 709 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 EP400NLQ6ZTU2 488 aa18.39■□□□□ 0.53
CACNA1A-202ENST00000573710 CCDC144AA2RUR9 1427 aa18.39■□□□□ 0.53
CACNA1A-202ENST00000573710 GUCY1B3Q02153 619 aa18.39■□□□□ 0.53
CACNA1A-202ENST00000573710 MTERF4Q7Z6M4 381 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-202ENST00000573710 TAF12Q16514 161 aa18.39■□□□□ 0.53
CACNA1A-202ENST00000573710 PPP4R4Q6NUP7 873 aa18.39■□□□□ 0.53
CACNA1A-202ENST00000573710 RUNDC1Q96C34 613 aa18.39■□□□□ 0.53
CACNA1A-202ENST00000573710 FAM212AQ96EL1 285 aa18.39■□□□□ 0.53
CACNA1A-202ENST00000573710 C11orf95C9JLR9 678 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-202ENST00000573710 KIF5CO60282 957 aa18.38■□□□□ 0.53
CACNA1A-202ENST00000573710 ADAMTS2O95450 1211 aa18.38■□□□□ 0.53
CACNA1A-202ENST00000573710 BIRC2Q13490 618 aa18.38■□□□□ 0.53
CACNA1A-202ENST00000573710 MAATS1Q7Z4T9 603 aa18.38■□□□□ 0.53
CACNA1A-202ENST00000573710 BRPF3Q9ULD4 1205 aa18.38■□□□□ 0.53
CACNA1A-202ENST00000573710 GNL1P36915 607 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-202ENST00000573710 FEZ2Q9UHY8 353 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-202ENST00000573710 AIDAQ96BJ3 306 aa18.38■□□□□ 0.53
CACNA1A-202ENST00000573710 PPP2R5CQ13362 524 aa18.38■□□□□ 0.53
CACNA1A-202ENST00000573710 WHAMMQ8TF30 809 aa18.38■□□□□ 0.53
CACNA1A-202ENST00000573710 GJC1P36383 396 aa18.37■□□□□ 0.53
CACNA1A-202ENST00000573710 C6orf163Q5TEZ5 329 aa18.37■□□□□ 0.53
CACNA1A-202ENST00000573710 SPATA32Q96LK8 384 aa18.37■□□□□ 0.53
CACNA1A-202ENST00000573710 PLS1Q14651 629 aa18.37■□□□□ 0.53
CACNA1A-202ENST00000573710 NLRP5P59047 1200 aa18.37■□□□□ 0.53
CACNA1A-202ENST00000573710 GNAI2P04899 355 aa18.37■□□□□ 0.53
CACNA1A-202ENST00000573710 FAM69CQ0P6D2 419 aa18.37■□□□□ 0.53
CACNA1A-202ENST00000573710 UPF3BQ9BZI7 483 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-202ENST00000573710 RANBP6O60518 1105 aaKnown RBP18.36■□□□□ 0.53
CACNA1A-202ENST00000573710 ZSCAN25Q6NSZ9 544 aa18.36■□□□□ 0.53
CACNA1A-202ENST00000573710 PRKCSHP14314 528 aaPredicted RBP18.36■□□□□ 0.53
CACNA1A-202ENST00000573710 TMEM132EQ6IEE7 984 aa18.36■□□□□ 0.53
CACNA1A-202ENST00000573710 FKBP15Q5T1M5 1219 aa18.36■□□□□ 0.53
CACNA1A-202ENST00000573710 ISM2Q6H9L7 571 aa18.36■□□□□ 0.53
CACNA1A-202ENST00000573710 TMEM110-MUSTN1A8MSY1 372 aa18.35■□□□□ 0.53
CACNA1A-202ENST00000573710 HDGFL1Q5TGJ6 251 aa18.35■□□□□ 0.53
CACNA1A-202ENST00000573710 RPGRQ92834 1020 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-202ENST00000573710 DACT3Q96B18 629 aaPredicted RBP18.35■□□□□ 0.53
CACNA1A-202ENST00000573710 TRMT1Q9NXH9 659 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-202ENST00000573710 SLC4A2P04920 1241 aa18.34■□□□□ 0.53
CACNA1A-202ENST00000573710 METTL24Q5JXM2 366 aa18.34■□□□□ 0.53
CACNA1A-202ENST00000573710 MICALCLQ6ZW33 695 aa18.34■□□□□ 0.53
CACNA1A-202ENST00000573710 LRRC43Q8N309 656 aa18.34■□□□□ 0.53
CACNA1A-202ENST00000573710 NUP88Q99567 741 aaPredicted RBP18.34■□□□□ 0.53
CACNA1A-202ENST00000573710 HAUS7Q99871 368 aa18.34■□□□□ 0.53
CACNA1A-202ENST00000573710 PTCD1O75127 700 aaKnown RBP18.34■□□□□ 0.53
CACNA1A-202ENST00000573710 ZNF444Q8N0Y2 327 aaPredicted RBP18.34■□□□□ 0.53
CACNA1A-202ENST00000573710 PPME1Q9Y570 386 aa18.34■□□□□ 0.53
CACNA1A-202ENST00000573710 ZNF622Q969S3 477 aaKnown RBP eCLIP18.34■□□□□ 0.53
CACNA1A-202ENST00000573710 BCAR3O75815 825 aa18.33■□□□□ 0.53
CACNA1A-202ENST00000573710 KIF4BQ2VIQ3 1234 aa18.33■□□□□ 0.53
CACNA1A-202ENST00000573710 CDKL5O76039 1030 aa18.33■□□□□ 0.53
CACNA1A-202ENST00000573710 GEN1Q17RS7 908 aa18.33■□□□□ 0.53
CACNA1A-202ENST00000573710 JAKMIP1Q96N16 626 aaKnown RBP18.33■□□□□ 0.53
CACNA1A-202ENST00000573710 FERMT1Q9BQL6 677 aa18.33■□□□□ 0.53
CACNA1A-202ENST00000573710 URI1O94763 535 aaPredicted RBP18.33■□□□□ 0.53
CACNA1A-202ENST00000573710 AKNAD1Q5T1N1 836 aa18.33■□□□□ 0.53
CACNA1A-202ENST00000573710 VPS36Q86VN1 386 aa18.33■□□□□ 0.53
CACNA1A-202ENST00000573710 UBXN4Q92575 508 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms