RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 SLC52A2Q9HAB3 445 aa16.37■□□□□ 0.21
PRPF8-207ENST00000573681 LRRC37A3O60309 1634 aa16.37■□□□□ 0.21
PRPF8-207ENST00000573681 COL22A1Q8NFW1 1626 aaPredicted RBP16.37■□□□□ 0.21
PRPF8-207ENST00000573681 CYP27B1O15528 508 aa16.36■□□□□ 0.21
PRPF8-207ENST00000573681 NKX1-1Q15270 411 aaPredicted RBP16.36■□□□□ 0.21
PRPF8-207ENST00000573681 ITPRIPQ8IWB1 547 aa16.36■□□□□ 0.21
PRPF8-207ENST00000573681 PCDH11XQ9BZA7 1347 aa16.36■□□□□ 0.21
PRPF8-207ENST00000573681 PCDH11YQ9BZA8 1340 aa16.36■□□□□ 0.21
PRPF8-207ENST00000573681 ERVV-2B6SEH9 535 aa16.34■□□□□ 0.21
PRPF8-207ENST00000573681 RWDD1Q9H446 243 aaPredicted RBP16.34■□□□□ 0.21
PRPF8-207ENST00000573681 KDM2BQ8NHM5 1336 aa16.34■□□□□ 0.21
PRPF8-207ENST00000573681 ABCA3Q99758 1704 aa16.33■□□□□ 0.21
PRPF8-207ENST00000573681 CABP4P57796 275 aa16.33■□□□□ 0.2
PRPF8-207ENST00000573681 INTS3Q68E01 1043 aaKnown RBP16.33■□□□□ 0.2
PRPF8-207ENST00000573681 NFATC2IPQ8NCF5 419 aa16.33■□□□□ 0.2
PRPF8-207ENST00000573681 CDCA7Q9BWT1 371 aaPredicted RBP16.33■□□□□ 0.2
PRPF8-207ENST00000573681 ZBTB40Q9NUA8 1239 aa16.33■□□□□ 0.2
PRPF8-207ENST00000573681 ABCC4O15439 1325 aa16.33■□□□□ 0.2
PRPF8-207ENST00000573681 ZBTB7BO15156 539 aaPredicted RBP16.32■□□□□ 0.2
PRPF8-207ENST00000573681 KCNQ3O43525 872 aa16.32■□□□□ 0.2
PRPF8-207ENST00000573681 ADAMTS2O95450 1211 aa16.32■□□□□ 0.2
PRPF8-207ENST00000573681 HDGFL1Q5TGJ6 251 aa16.32■□□□□ 0.2
PRPF8-207ENST00000573681 COL14A1Q05707 1796 aaKnown RBP16.31■□□□□ 0.2
PRPF8-207ENST00000573681 PHLPP1O60346 1717 aa16.31■□□□□ 0.2
PRPF8-207ENST00000573681 COL16A1Q07092 1604 aaPredicted RBP16.31■□□□□ 0.2
PRPF8-207ENST00000573681 HEG1Q9ULI3 1381 aa16.31■□□□□ 0.2
PRPF8-207ENST00000573681 NUTM2BA6NNL0 878 aaPredicted RBP16.31■□□□□ 0.2
PRPF8-207ENST00000573681 NUTM2EB1AL46 878 aaPredicted RBP16.31■□□□□ 0.2
PRPF8-207ENST00000573681 GIGYF1O75420 1035 aaPredicted RBP16.31■□□□□ 0.2
PRPF8-207ENST00000573681 ZNF790Q6PG37 636 aa16.31■□□□□ 0.2
PRPF8-207ENST00000573681 NUTM2AQ8IVF1 878 aaPredicted RBP16.31■□□□□ 0.2
PRPF8-207ENST00000573681 THRAP3Q9Y2W1 955 aaKnown RBP16.31■□□□□ 0.2
PRPF8-207ENST00000573681 KDM6AO15550 1401 aaPredicted RBP16.3■□□□□ 0.2
PRPF8-207ENST00000573681 JCADQ9P266 1359 aa16.3■□□□□ 0.2
PRPF8-207ENST00000573681 PCDHB15Q9Y5E8 787 aa16.3■□□□□ 0.2
PRPF8-207ENST00000573681 DDX54Q8TDD1 881 aaKnown RBP16.29■□□□□ 0.2
PRPF8-207ENST00000573681 USP35Q9P2H5 1018 aa16.29■□□□□ 0.2
PRPF8-207ENST00000573681 ADAMTS7Q9UKP4 1686 aa16.29■□□□□ 0.2
PRPF8-207ENST00000573681 EXOC5O00471 708 aa16.28■□□□□ 0.2
PRPF8-207ENST00000573681 IGHDP01880 384 aa16.28■□□□□ 0.2
PRPF8-207ENST00000573681 EIF2S2P20042 333 aaKnown RBP16.28■□□□□ 0.2
PRPF8-207ENST00000573681 CCT4P50991 539 aaKnown RBP16.28■□□□□ 0.2
PRPF8-207ENST00000573681 TTC5Q8N0Z6 440 aa16.28■□□□□ 0.2
PRPF8-207ENST00000573681 DBF4Q9UBU7 674 aaPredicted RBP16.28■□□□□ 0.2
PRPF8-207ENST00000573681 FLIIQ13045 1269 aa16.27■□□□□ 0.2
PRPF8-207ENST00000573681 HDAC1Q13547 482 aaPredicted RBP16.27■□□□□ 0.2
PRPF8-207ENST00000573681 G2E3Q7L622 706 aa16.27■□□□□ 0.2
PRPF8-207ENST00000573681 PKD1L3Q7Z443 1732 aa16.26■□□□□ 0.19
PRPF8-207ENST00000573681 SNRPA1P09661 255 aaKnown RBP16.26■□□□□ 0.19
PRPF8-207ENST00000573681 NECTIN2Q92692 538 aa16.26■□□□□ 0.19
PRPF8-207ENST00000573681 FMNL2Q96PY5 1086 aa16.26■□□□□ 0.19
PRPF8-207ENST00000573681 SPATA31A6Q5VVP1 1343 aa16.25■□□□□ 0.19
PRPF8-207ENST00000573681 FKBP5Q13451 457 aaPredicted RBP16.25■□□□□ 0.19
PRPF8-207ENST00000573681 HYPKQ9NX55 129 aa16.25■□□□□ 0.19
PRPF8-207ENST00000573681 PARP4Q9UKK3 1724 aaKnown RBP16.25■□□□□ 0.19
PRPF8-207ENST00000573681 SPATA31A1Q5TZJ5 1347 aa16.24■□□□□ 0.19
PRPF8-207ENST00000573681 SLC39A6Q13433 755 aa16.24■□□□□ 0.19
PRPF8-207ENST00000573681 MRC1P22897 1456 aa16.23■□□□□ 0.19
PRPF8-207ENST00000573681 DISP2A7MBM2 1401 aa16.23■□□□□ 0.19
PRPF8-207ENST00000573681 BARGINQ6ZT62 677 aa16.23■□□□□ 0.19
PRPF8-207ENST00000573681 UNC5CLQ8IV45 518 aa16.23■□□□□ 0.19
PRPF8-207ENST00000573681 NGLY1Q96IV0 654 aa16.23■□□□□ 0.19
PRPF8-207ENST00000573681 DDX21Q9NR30 783 aaKnown RBP eCLIP16.23■□□□□ 0.19
PRPF8-207ENST00000573681 CHPF2Q9P2E5 772 aa16.23■□□□□ 0.19
PRPF8-207ENST00000573681 KDM3BQ7LBC6 1761 aa16.23■□□□□ 0.19
PRPF8-207ENST00000573681 SPATA31A5Q5VU36 1347 aa16.22■□□□□ 0.19
PRPF8-207ENST00000573681 SPATA31A7Q8IWB4 1347 aa16.22■□□□□ 0.19
PRPF8-207ENST00000573681 RGS12O14924 1447 aa16.22■□□□□ 0.19
PRPF8-207ENST00000573681 SLC4A10Q6U841 1118 aa16.22■□□□□ 0.19
PRPF8-207ENST00000573681 ZNF496Q96IT1 587 aaPredicted RBP16.22■□□□□ 0.19
PRPF8-207ENST00000573681 TSHZ2Q9NRE2 1034 aa16.22■□□□□ 0.19
PRPF8-207ENST00000573681 SLIT2O94813 1529 aa16.21■□□□□ 0.19
PRPF8-207ENST00000573681 RPAP2Q8IXW5 612 aaPredicted RBP16.21■□□□□ 0.19
PRPF8-207ENST00000573681 FNBP4Q8N3X1 1017 aaPredicted RBP16.21■□□□□ 0.19
PRPF8-207ENST00000573681 PHAXQ9H814 394 aaKnown RBP16.21■□□□□ 0.19
PRPF8-207ENST00000573681 TMOD3Q9NYL9 352 aa16.21■□□□□ 0.19
PRPF8-207ENST00000573681 F6X3S4 739 aa16.2■□□□□ 0.18
PRPF8-207ENST00000573681 DDX58O95786 925 aaKnown RBP16.2■□□□□ 0.18
PRPF8-207ENST00000573681 SCN11AQ9UI33 1791 aa16.2■□□□□ 0.18
PRPF8-207ENST00000573681 GNAI3P08754 354 aa16.19■□□□□ 0.18
PRPF8-207ENST00000573681 VPS72Q15906 364 aa16.19■□□□□ 0.18
PRPF8-207ENST00000573681 DDB1Q16531 1140 aa16.19■□□□□ 0.18
PRPF8-207ENST00000573681 CCDC9Q9Y3X0 531 aaKnown RBP16.19■□□□□ 0.18
PRPF8-207ENST00000573681 KSR2Q6VAB6 950 aa16.18■□□□□ 0.18
PRPF8-207ENST00000573681 SMC5Q8IY18 1101 aa16.18■□□□□ 0.18
PRPF8-207ENST00000573681 GCC1Q96CN9 775 aa16.18■□□□□ 0.18
PRPF8-207ENST00000573681 TEX13AQ9BXU3 409 aaPredicted RBP16.18■□□□□ 0.18
PRPF8-207ENST00000573681 SIPA1L3O60292 1781 aaPredicted RBP16.18■□□□□ 0.18
PRPF8-207ENST00000573681 ERBB4Q15303 1308 aa16.18■□□□□ 0.18
PRPF8-207ENST00000573681 PRAMEF22A3QJZ6 481 aa16.17■□□□□ 0.18
PRPF8-207ENST00000573681 PDIA6Q15084 440 aa16.17■□□□□ 0.18
PRPF8-207ENST00000573681 DNAAF4Q8WXU2 420 aa16.17■□□□□ 0.18
PRPF8-207ENST00000573681 C8orf37Q96NL8 207 aa16.17■□□□□ 0.18
PRPF8-207ENST00000573681 SRCIN1Q9C0H9 1055 aa16.17■□□□□ 0.18
PRPF8-207ENST00000573681 PI4KAP2A4QPH2 592 aa16.16■□□□□ 0.18
PRPF8-207ENST00000573681 HSPA1LP34931 641 aa16.16■□□□□ 0.18
PRPF8-207ENST00000573681 VSIG10Q8N0Z9 540 aa16.16■□□□□ 0.18
PRPF8-207ENST00000573681 ANKRD44Q8N8A2 993 aa16.16■□□□□ 0.18
PRPF8-207ENST00000573681 PI4KAP1Q8N8J0 262 aa16.16■□□□□ 0.18
PRPF8-207ENST00000573681 PDZRN3Q9UPQ7 1066 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms