RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 THUMPD2Q9BTF0 503 aaKnown RBP19.02■□□□□ 0.64
NPLOC4-209ENST00000572760 SMARCC1Q92922 1105 aaPredicted RBP19.01■□□□□ 0.63
NPLOC4-209ENST00000572760 CEMIPQ8WUJ3 1361 aa19.01■□□□□ 0.63
NPLOC4-209ENST00000572760 TRIM35Q9UPQ4 493 aa19■□□□□ 0.63
NPLOC4-209ENST00000572760 MRC1P22897 1456 aa19■□□□□ 0.63
NPLOC4-209ENST00000572760 SOCS7O14512 581 aa18.99■□□□□ 0.63
NPLOC4-209ENST00000572760 EN1Q05925 392 aaPredicted RBP18.99■□□□□ 0.63
NPLOC4-209ENST00000572760 TAF7Q15545 349 aaPredicted RBP18.99■□□□□ 0.63
NPLOC4-209ENST00000572760 DEFB132Q7Z7B7 95 aa18.99■□□□□ 0.63
NPLOC4-209ENST00000572760 NGEFQ8N5V2 710 aa18.99■□□□□ 0.63
NPLOC4-209ENST00000572760 BTBD11A6QL63 1104 aa18.98■□□□□ 0.63
NPLOC4-209ENST00000572760 PLSCR1O15162 318 aa18.98■□□□□ 0.63
NPLOC4-209ENST00000572760 CALD1Q05682 793 aaKnown RBP18.98■□□□□ 0.63
NPLOC4-209ENST00000572760 TTC5Q8N0Z6 440 aa18.98■□□□□ 0.63
NPLOC4-209ENST00000572760 ASAP1Q9ULH1 1129 aa18.98■□□□□ 0.63
NPLOC4-209ENST00000572760 EP400Q96L91 3159 aa18.98■□□□□ 0.63
NPLOC4-209ENST00000572760 LY75O60449 1722 aa18.97■□□□□ 0.63
NPLOC4-209ENST00000572760 RGPD3A6NKT7 1758 aaPredicted RBP18.97■□□□□ 0.63
NPLOC4-209ENST00000572760 RGPD4Q7Z3J3 1758 aa18.97■□□□□ 0.63
NPLOC4-209ENST00000572760 CCDC27Q2M243 656 aa18.97■□□□□ 0.63
NPLOC4-209ENST00000572760 NCBP3Q53F19 620 aaKnown RBP18.97■□□□□ 0.63
NPLOC4-209ENST00000572760 ATG3Q9NT62 314 aa18.97■□□□□ 0.63
NPLOC4-209ENST00000572760 LAS1LQ9Y4W2 734 aaKnown RBP18.97■□□□□ 0.63
NPLOC4-209ENST00000572760 PALLDQ8WX93 1383 aa18.96■□□□□ 0.63
NPLOC4-209ENST00000572760 SLC39A6Q13433 755 aa18.96■□□□□ 0.63
NPLOC4-209ENST00000572760 RBM42Q9BTD8 480 aaKnown RBP18.96■□□□□ 0.63
NPLOC4-209ENST00000572760 EZH2Q15910 746 aaKnown RBP18.95■□□□□ 0.62
NPLOC4-209ENST00000572760 WWC1Q8IX03 1113 aa18.95■□□□□ 0.62
NPLOC4-209ENST00000572760 MIS18AQ9NYP9 233 aa18.94■□□□□ 0.62
NPLOC4-209ENST00000572760 PAPPAQ13219 1627 aa18.93■□□□□ 0.62
NPLOC4-209ENST00000572760 PTCD1O75127 700 aaKnown RBP18.93■□□□□ 0.62
NPLOC4-209ENST00000572760 HNRNPUQ00839 825 aaKnown RBP eCLIP18.93■□□□□ 0.62
NPLOC4-209ENST00000572760 TXNRD1Q16881 649 aa18.93■□□□□ 0.62
NPLOC4-209ENST00000572760 ZNF790Q6PG37 636 aa18.93■□□□□ 0.62
NPLOC4-209ENST00000572760 CAMKK2Q96RR4 588 aa18.93■□□□□ 0.62
NPLOC4-209ENST00000572760 TSPYL4Q9UJ04 414 aa18.93■□□□□ 0.62
NPLOC4-209ENST00000572760 CCNL1Q9UK58 526 aaPredicted RBP18.93■□□□□ 0.62
NPLOC4-209ENST00000572760 KDM3BQ7LBC6 1761 aa18.93■□□□□ 0.62
NPLOC4-209ENST00000572760 GNAI1P63096 354 aa18.92■□□□□ 0.62
NPLOC4-209ENST00000572760 UBR2Q8IWV8 1755 aa18.91■□□□□ 0.62
NPLOC4-209ENST00000572760 LOC102724428A0A0B4J2F2 783 aa18.91■□□□□ 0.62
NPLOC4-209ENST00000572760 ATP6V1AP38606 617 aa18.91■□□□□ 0.62
NPLOC4-209ENST00000572760 SIK1P57059 783 aa18.91■□□□□ 0.62
NPLOC4-209ENST00000572760 SLC27A3Q5K4L6 730 aa18.91■□□□□ 0.62
NPLOC4-209ENST00000572760 BABAM1Q9NWV8 329 aa18.91■□□□□ 0.62
NPLOC4-209ENST00000572760 TAF1LQ8IZX4 1826 aa18.9■□□□□ 0.62
NPLOC4-209ENST00000572760 KCNQ3O43525 872 aa18.9■□□□□ 0.62
NPLOC4-209ENST00000572760 HMGB2P26583 209 aaKnown RBP18.9■□□□□ 0.62
NPLOC4-209ENST00000572760 WDR63Q8IWG1 891 aa18.9■□□□□ 0.62
NPLOC4-209ENST00000572760 CFAP44Q96MT7 982 aa18.9■□□□□ 0.62
NPLOC4-209ENST00000572760 FMNL2Q96PY5 1086 aa18.9■□□□□ 0.62
NPLOC4-209ENST00000572760 RREB1Q92766 1687 aa18.89■□□□□ 0.61
NPLOC4-209ENST00000572760 IFT57Q9NWB7 429 aa18.89■□□□□ 0.61
NPLOC4-209ENST00000572760 KCNQ4P56696 695 aa18.88■□□□□ 0.61
NPLOC4-209ENST00000572760 PROM2Q8N271 834 aa18.88■□□□□ 0.61
NPLOC4-209ENST00000572760 ZNF496Q96IT1 587 aaPredicted RBP18.88■□□□□ 0.61
NPLOC4-209ENST00000572760 CHL1O00533 1208 aa18.87■□□□□ 0.61
NPLOC4-209ENST00000572760 C5P01031 1676 aa18.87■□□□□ 0.61
NPLOC4-209ENST00000572760 IL16Q14005 1332 aa18.87■□□□□ 0.61
NPLOC4-209ENST00000572760 NUP188Q5SRE5 1749 aa18.87■□□□□ 0.61
NPLOC4-209ENST00000572760 ZNF831Q5JPB2 1677 aa18.86■□□□□ 0.61
NPLOC4-209ENST00000572760 KCPQ6ZWJ8 1503 aa18.86■□□□□ 0.61
NPLOC4-209ENST00000572760 HEG1Q9ULI3 1381 aa18.85■□□□□ 0.61
NPLOC4-209ENST00000572760 GOLGA2Q08379 1002 aa18.85■□□□□ 0.61
NPLOC4-209ENST00000572760 NBPF14Q5TI25 921 aa18.85■□□□□ 0.61
NPLOC4-209ENST00000572760 VSIG10Q8N0Z9 540 aa18.85■□□□□ 0.61
NPLOC4-209ENST00000572760 MBIPQ9NS73 344 aa18.85■□□□□ 0.61
NPLOC4-209ENST00000572760 LRRC4BQ9NT99 713 aa18.85■□□□□ 0.61
NPLOC4-209ENST00000572760 TJP1Q07157 1748 aa18.84■□□□□ 0.61
NPLOC4-209ENST00000572760 SNRPA1P09661 255 aaKnown RBP18.84■□□□□ 0.61
NPLOC4-209ENST00000572760 ZNF853P0CG23 659 aa18.84■□□□□ 0.61
NPLOC4-209ENST00000572760 EIF4A1P60842 406 aaKnown RBP18.84■□□□□ 0.61
NPLOC4-209ENST00000572760 DNAJC10Q8IXB1 793 aa18.84■□□□□ 0.61
NPLOC4-209ENST00000572760 TEX13AQ9BXU3 409 aaPredicted RBP18.84■□□□□ 0.61
NPLOC4-209ENST00000572760 ITPK1Q13572 414 aa18.83■□□□□ 0.6
NPLOC4-209ENST00000572760 SLC4A9Q96Q91 983 aa18.83■□□□□ 0.6
NPLOC4-209ENST00000572760 MYH16Q9H6N6 1097 aa18.83■□□□□ 0.6
NPLOC4-209ENST00000572760 STK32BQ9NY57 414 aa18.83■□□□□ 0.6
NPLOC4-209ENST00000572760 COL5A3P25940 1745 aaPredicted RBP18.83■□□□□ 0.6
NPLOC4-209ENST00000572760 ZNF521Q96K83 1311 aa18.82■□□□□ 0.6
NPLOC4-209ENST00000572760 TSR2Q969E8 191 aaKnown RBP18.82■□□□□ 0.6
NPLOC4-209ENST00000572760 MYH14Q7Z406 1995 aaKnown RBP18.81■□□□□ 0.6
NPLOC4-209ENST00000572760 STARD3NLO95772 234 aa18.81■□□□□ 0.6
NPLOC4-209ENST00000572760 LINC00116Q8NCU8 138 aa18.81■□□□□ 0.6
NPLOC4-209ENST00000572760 AK7Q96M32 723 aa18.81■□□□□ 0.6
NPLOC4-209ENST00000572760 LAMB4A4D0S4 1761 aa18.81■□□□□ 0.6
NPLOC4-209ENST00000572760 C4BP0C0L5 1744 aa18.8■□□□□ 0.6
NPLOC4-209ENST00000572760 E9PSI1 815 aa18.8■□□□□ 0.6
NPLOC4-209ENST00000572760 CICQ96RK0 1608 aaPredicted RBP18.8■□□□□ 0.6
NPLOC4-209ENST00000572760 GIGYF1O75420 1035 aaPredicted RBP18.79■□□□□ 0.6
NPLOC4-209ENST00000572760 YTHDC1Q96MU7 727 aaKnown RBP18.79■□□□□ 0.6
NPLOC4-209ENST00000572760 ZBED9Q6R2W3 1325 aa18.78■□□□□ 0.6
NPLOC4-209ENST00000572760 FANCIQ9NVI1 1328 aa18.78■□□□□ 0.6
NPLOC4-209ENST00000572760 SPINK5Q9NQ38 1064 aaPredicted RBP18.78■□□□□ 0.6
NPLOC4-209ENST00000572760 USP16Q9Y5T5 823 aa18.78■□□□□ 0.6
NPLOC4-209ENST00000572760 PRAMEF22A3QJZ6 481 aa18.77■□□□□ 0.6
NPLOC4-209ENST00000572760 ELL2O00472 640 aaPredicted RBP18.77■□□□□ 0.6
NPLOC4-209ENST00000572760 CYP19A1P11511 503 aaPredicted RBP18.77■□□□□ 0.6
NPLOC4-209ENST00000572760 EIF2S2P20042 333 aaKnown RBP18.77■□□□□ 0.6
NPLOC4-209ENST00000572760 KRT24Q2M2I5 525 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms