RNA–Protein interactions for RNA: ENST00000572441.5

ABR-217, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4 BASIC

Gene ABR, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-217ENST00000572441 CCNL1Q9UK58 526 aaPredicted RBP23.97■■□□□ 1.43
ABR-217ENST00000572441 CABP4P57796 275 aa23.96■■□□□ 1.43
ABR-217ENST00000572441 SLC16A10Q8TF71 515 aa23.96■■□□□ 1.43
ABR-217ENST00000572441 KDM6AO15550 1401 aaPredicted RBP23.95■■□□□ 1.42
ABR-217ENST00000572441 MTHFSDQ2M296 383 aaKnown RBP23.95■■□□□ 1.42
ABR-217ENST00000572441 TFCP2L1Q9NZI6 479 aa23.94■■□□□ 1.42
ABR-217ENST00000572441 MYBBP1AQ9BQG0 1328 aaKnown RBP23.93■■□□□ 1.42
ABR-217ENST00000572441 PRKAR2BP31323 418 aa23.93■■□□□ 1.42
ABR-217ENST00000572441 NLGN2Q8NFZ4 835 aa23.93■■□□□ 1.42
ABR-217ENST00000572441 RSPH6AQ9H0K4 717 aa23.93■■□□□ 1.42
ABR-217ENST00000572441 HMGB2P26583 209 aaKnown RBP23.92■■□□□ 1.42
ABR-217ENST00000572441 GAS2L2Q8NHY3 880 aa23.92■■□□□ 1.42
ABR-217ENST00000572441 GOLGB1Q14789 3259 aaKnown RBP23.91■■□□□ 1.42
ABR-217ENST00000572441 FCHSD2O94868 740 aa23.91■■□□□ 1.42
ABR-217ENST00000572441 COL23A1Q86Y22 540 aaPredicted RBP23.91■■□□□ 1.42
ABR-217ENST00000572441 ASAP1Q9ULH1 1129 aa23.91■■□□□ 1.42
ABR-217ENST00000572441 KLHL34Q8N239 644 aa23.9■■□□□ 1.42
ABR-217ENST00000572441 SCN11AQ9UI33 1791 aa23.89■■□□□ 1.42
ABR-217ENST00000572441 GPR162Q16538 588 aa23.89■■□□□ 1.41
ABR-217ENST00000572441 POLD1P28340 1107 aa23.88■■□□□ 1.41
ABR-217ENST00000572441 NFATC2IPQ8NCF5 419 aa23.88■■□□□ 1.41
ABR-217ENST00000572441 ATG3Q9NT62 314 aa23.88■■□□□ 1.41
ABR-217ENST00000572441 C5P01031 1676 aa23.87■■□□□ 1.41
ABR-217ENST00000572441 LOC102724428A0A0B4J2F2 783 aa23.87■■□□□ 1.41
ABR-217ENST00000572441 RNMTO43148 476 aaKnown RBP23.87■■□□□ 1.41
ABR-217ENST00000572441 NEFMP07197 916 aa23.87■■□□□ 1.41
ABR-217ENST00000572441 SIK1P57059 783 aa23.87■■□□□ 1.41
ABR-217ENST00000572441 PHACTR3Q96KR7 559 aa23.87■■□□□ 1.41
ABR-217ENST00000572441 PRKRIP1Q9H875 184 aaPredicted RBP23.87■■□□□ 1.41
ABR-217ENST00000572441 LGR6Q9HBX8 967 aa23.87■■□□□ 1.41
ABR-217ENST00000572441 TAF1LQ8IZX4 1826 aa23.87■■□□□ 1.41
ABR-217ENST00000572441 GNAT3A8MTJ3 354 aa23.86■■□□□ 1.41
ABR-217ENST00000572441 SLC52A2Q9HAB3 445 aa23.85■■□□□ 1.41
ABR-217ENST00000572441 YBX3P16989 372 aaKnown RBP eCLIP23.84■■□□□ 1.41
ABR-217ENST00000572441 AMIGO3Q86WK7 504 aa23.84■■□□□ 1.41
ABR-217ENST00000572441 RBM42Q9BTD8 480 aaKnown RBP23.84■■□□□ 1.41
ABR-217ENST00000572441 VIRMAQ69YN4 1812 aaKnown RBP23.84■■□□□ 1.41
ABR-217ENST00000572441 ATP6V1AP38606 617 aa23.83■■□□□ 1.41
ABR-217ENST00000572441 MSL1Q68DK7 614 aa23.83■■□□□ 1.41
ABR-217ENST00000572441 PNNQ9H307 717 aaKnown RBP23.83■■□□□ 1.41
ABR-217ENST00000572441 C1QTNF8P60827 252 aa23.82■■□□□ 1.4
ABR-217ENST00000572441 PELP1Q8IZL8 1130 aaKnown RBP23.82■■□□□ 1.4
ABR-217ENST00000572441 MRC1P22897 1456 aa23.81■■□□□ 1.4
ABR-217ENST00000572441 ADAMTS7Q9UKP4 1686 aa23.81■■□□□ 1.4
ABR-217ENST00000572441 AK7Q96M32 723 aa23.8■■□□□ 1.4
ABR-217ENST00000572441 C4BP0C0L5 1744 aa23.79■■□□□ 1.4
ABR-217ENST00000572441 MSH5O43196 834 aa23.79■■□□□ 1.4
ABR-217ENST00000572441 PTCD1O75127 700 aaKnown RBP23.79■■□□□ 1.4
ABR-217ENST00000572441 TEFQ10587 303 aa23.79■■□□□ 1.4
ABR-217ENST00000572441 SMIM5Q71RC9 77 aa23.79■■□□□ 1.4
ABR-217ENST00000572441 RTF1Q92541 710 aaKnown RBP23.79■■□□□ 1.4
ABR-217ENST00000572441 IL17REQ8NFR9 667 aa23.78■■□□□ 1.4
ABR-217ENST00000572441 MAPK8IP3Q9UPT6 1336 aa23.78■■□□□ 1.4
ABR-217ENST00000572441 ITPK1Q13572 414 aa23.77■■□□□ 1.4
ABR-217ENST00000572441 LINC00116Q8NCU8 138 aa23.77■■□□□ 1.4
ABR-217ENST00000572441 WDR43Q15061 677 aaKnown RBP eCLIP23.76■■□□□ 1.39
ABR-217ENST00000572441 PLEKHF1Q96S99 279 aa23.76■■□□□ 1.39
ABR-217ENST00000572441 UBR3Q6ZT12 1888 aa23.75■■□□□ 1.39
ABR-217ENST00000572441 ZNF831Q5JPB2 1677 aa23.75■■□□□ 1.39
ABR-217ENST00000572441 SENP3-EIF4A1A0A087X0R7 540 aa23.74■■□□□ 1.39
ABR-217ENST00000572441 SLC39A6Q13433 755 aa23.74■■□□□ 1.39
ABR-217ENST00000572441 FLAD1Q8NFF5 587 aa23.74■■□□□ 1.39
ABR-217ENST00000572441 SLC4A9Q96Q91 983 aa23.74■■□□□ 1.39
ABR-217ENST00000572441 HTATSF1O43719 755 aaKnown RBP23.73■■□□□ 1.39
ABR-217ENST00000572441 TTC5Q8N0Z6 440 aa23.73■■□□□ 1.39
ABR-217ENST00000572441 CEMIPQ8WUJ3 1361 aa23.73■■□□□ 1.39
ABR-217ENST00000572441 GNPATO15228 680 aa23.72■■□□□ 1.39
ABR-217ENST00000572441 ANP32CO43423 234 aa23.72■■□□□ 1.39
ABR-217ENST00000572441 MCM10Q7L590 875 aa23.72■■□□□ 1.39
ABR-217ENST00000572441 PHF14O94880 888 aa23.71■■□□□ 1.39
ABR-217ENST00000572441 NFE2L2Q16236 605 aa23.7■■□□□ 1.38
ABR-217ENST00000572441 SSFA2P28290 1259 aa23.69■■□□□ 1.38
ABR-217ENST00000572441 DCTN1Q14203 1278 aa23.69■■□□□ 1.38
ABR-217ENST00000572441 CD2APQ9Y5K6 639 aa23.69■■□□□ 1.38
ABR-217ENST00000572441 SIPA1L3O60292 1781 aaPredicted RBP23.69■■□□□ 1.38
ABR-217ENST00000572441 COL5A3P25940 1745 aaPredicted RBP23.68■■□□□ 1.38
ABR-217ENST00000572441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.68■■□□□ 1.38
ABR-217ENST00000572441 BTBD11A6QL63 1104 aa23.68■■□□□ 1.38
ABR-217ENST00000572441 RC3H1Q5TC82 1133 aaKnown RBP23.68■■□□□ 1.38
ABR-217ENST00000572441 CNTNAP4Q9C0A0 1308 aa23.67■■□□□ 1.38
ABR-217ENST00000572441 GRIN3BO60391 1043 aa23.67■■□□□ 1.38
ABR-217ENST00000572441 GIGYF1O75420 1035 aaPredicted RBP23.67■■□□□ 1.38
ABR-217ENST00000572441 ZNF790Q6PG37 636 aa23.67■■□□□ 1.38
ABR-217ENST00000572441 RTCBQ9Y3I0 505 aaKnown RBP23.67■■□□□ 1.38
ABR-217ENST00000572441 KCPQ6ZWJ8 1503 aa23.67■■□□□ 1.38
ABR-217ENST00000572441 DLG5Q8TDM6 1919 aa23.67■■□□□ 1.38
ABR-217ENST00000572441 CCDC146Q8IYE0 955 aa23.66■■□□□ 1.38
ABR-217ENST00000572441 ADAMTS8Q9UP79 889 aa23.66■■□□□ 1.38
ABR-217ENST00000572441 TJP1Q07157 1748 aa23.66■■□□□ 1.38
ABR-217ENST00000572441 CICQ96RK0 1608 aaPredicted RBP23.66■■□□□ 1.38
ABR-217ENST00000572441 CRKLP46109 303 aaKnown RBP23.65■■□□□ 1.38
ABR-217ENST00000572441 VSIG10Q8N0Z9 540 aa23.65■■□□□ 1.38
ABR-217ENST00000572441 UBR2Q8IWV8 1755 aa23.65■■□□□ 1.38
ABR-217ENST00000572441 DNAJC10Q8IXB1 793 aa23.64■■□□□ 1.37
ABR-217ENST00000572441 RUNDC1Q96C34 613 aa23.64■■□□□ 1.37
ABR-217ENST00000572441 ATP10DQ9P241 1426 aa23.64■■□□□ 1.37
ABR-217ENST00000572441 RIPK4P57078 832 aa23.63■■□□□ 1.37
ABR-217ENST00000572441 TRAPPC3LQ5T215 181 aa23.63■■□□□ 1.37
ABR-217ENST00000572441 FMNL2Q96PY5 1086 aa23.63■■□□□ 1.37
ABR-217ENST00000572441 RPS6KA4O75676 772 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms