RNA–Protein interactions for RNA: ENST00000572116.1

ATP2A3-210, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 1 (best)

Gene ATP2A3, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-210ENST00000572116 UBR3Q6ZT12 1888 aa15.3■□□□□ 0.04
ATP2A3-210ENST00000572116 MYH14Q7Z406 1995 aaKnown RBP15.3■□□□□ 0.04
ATP2A3-210ENST00000572116 PNISRQ8TF01 805 aaKnown RBP15.3■□□□□ 0.04
ATP2A3-210ENST00000572116 PIGBQ92521 554 aa15.3■□□□□ 0.04
ATP2A3-210ENST00000572116 RUNDC1Q96C34 613 aa15.3■□□□□ 0.04
ATP2A3-210ENST00000572116 CICQ96RK0 1608 aaPredicted RBP15.3■□□□□ 0.04
ATP2A3-210ENST00000572116 CAMKK2Q96RR4 588 aa15.29■□□□□ 0.04
ATP2A3-210ENST00000572116 RTF1Q92541 710 aaKnown RBP15.28■□□□□ 0.04
ATP2A3-210ENST00000572116 LAMB4A4D0S4 1761 aa15.28■□□□□ 0.04
ATP2A3-210ENST00000572116 CEMIPQ8WUJ3 1361 aa15.27■□□□□ 0.04
ATP2A3-210ENST00000572116 C4BP0C0L5 1744 aa15.27■□□□□ 0.04
ATP2A3-210ENST00000572116 CCER2I3L3R5 266 aa15.27■□□□□ 0.04
ATP2A3-210ENST00000572116 FAM9BQ8IZU0 186 aa15.27■□□□□ 0.04
ATP2A3-210ENST00000572116 MIER1Q8N108 512 aa15.27■□□□□ 0.04
ATP2A3-210ENST00000572116 NFATC2IPQ8NCF5 419 aa15.27■□□□□ 0.04
ATP2A3-210ENST00000572116 IL17REQ8NFR9 667 aa15.27■□□□□ 0.04
ATP2A3-210ENST00000572116 SLC52A2Q9HAB3 445 aa15.27■□□□□ 0.04
ATP2A3-210ENST00000572116 PALLDQ8WX93 1383 aa15.26■□□□□ 0.03
ATP2A3-210ENST00000572116 TMPOP42166 694 aaKnown RBP15.26■□□□□ 0.03
ATP2A3-210ENST00000572116 TEFQ10587 303 aa15.26■□□□□ 0.03
ATP2A3-210ENST00000572116 MCM10Q7L590 875 aa15.26■□□□□ 0.03
ATP2A3-210ENST00000572116 RRP7AQ9Y3A4 280 aaKnown RBP15.26■□□□□ 0.03
ATP2A3-210ENST00000572116 HTATSF1O43719 755 aaKnown RBP15.25■□□□□ 0.03
ATP2A3-210ENST00000572116 RIPK4P57078 832 aa15.25■□□□□ 0.03
ATP2A3-210ENST00000572116 DCTN1Q14203 1278 aa15.25■□□□□ 0.03
ATP2A3-210ENST00000572116 NEUROD2Q15784 382 aa15.25■□□□□ 0.03
ATP2A3-210ENST00000572116 TXNRD1Q16881 649 aa15.25■□□□□ 0.03
ATP2A3-210ENST00000572116 SMARCC1Q92922 1105 aaPredicted RBP15.25■□□□□ 0.03
ATP2A3-210ENST00000572116 ASAP1Q9ULH1 1129 aa15.25■□□□□ 0.03
ATP2A3-210ENST00000572116 KCPQ6ZWJ8 1503 aa15.24■□□□□ 0.03
ATP2A3-210ENST00000572116 ATG3Q9NT62 314 aa15.24■□□□□ 0.03
ATP2A3-210ENST00000572116 APAF1O14727 1248 aa15.23■□□□□ 0.03
ATP2A3-210ENST00000572116 PROM2Q8N271 834 aa15.23■□□□□ 0.03
ATP2A3-210ENST00000572116 CASZ1Q86V15 1759 aa15.22■□□□□ 0.03
ATP2A3-210ENST00000572116 LMOD3Q0VAK6 560 aa15.22■□□□□ 0.03
ATP2A3-210ENST00000572116 CCNL1Q9UK58 526 aaPredicted RBP15.22■□□□□ 0.03
ATP2A3-210ENST00000572116 C4AP0C0L4 1744 aa15.22■□□□□ 0.03
ATP2A3-210ENST00000572116 KCNQ4P56696 695 aa15.21■□□□□ 0.03
ATP2A3-210ENST00000572116 SLC27A3Q5K4L6 730 aa15.21■□□□□ 0.03
ATP2A3-210ENST00000572116 THUMPD2Q9BTF0 503 aaKnown RBP15.21■□□□□ 0.03
ATP2A3-210ENST00000572116 SLC39A6Q13433 755 aa15.2■□□□□ 0.02
ATP2A3-210ENST00000572116 RBM42Q9BTD8 480 aaKnown RBP15.2■□□□□ 0.02
ATP2A3-210ENST00000572116 LRRC4BQ9NT99 713 aa15.2■□□□□ 0.02
ATP2A3-210ENST00000572116 CACNA1FO60840 1977 aa15.2■□□□□ 0.02
ATP2A3-210ENST00000572116 SENP3-EIF4A1A0A087X0R7 540 aa15.19■□□□□ 0.02
ATP2A3-210ENST00000572116 LOC102724428A0A0B4J2F2 783 aa15.19■□□□□ 0.02
ATP2A3-210ENST00000572116 SIK1P57059 783 aa15.19■□□□□ 0.02
ATP2A3-210ENST00000572116 TRIM35Q9UPQ4 493 aa15.19■□□□□ 0.02
ATP2A3-210ENST00000572116 BTBD11A6QL63 1104 aa15.18■□□□□ 0.02
ATP2A3-210ENST00000572116 PTCD1O75127 700 aaKnown RBP15.18■□□□□ 0.02
ATP2A3-210ENST00000572116 NBPF14Q5TI25 921 aa15.18■□□□□ 0.02
ATP2A3-210ENST00000572116 TTC5Q8N0Z6 440 aa15.18■□□□□ 0.02
ATP2A3-210ENST00000572116 ATP6V1AP38606 617 aa15.17■□□□□ 0.02
ATP2A3-210ENST00000572116 TAF7Q15545 349 aaPredicted RBP15.17■□□□□ 0.02
ATP2A3-210ENST00000572116 ZNF790Q6PG37 636 aa15.16■□□□□ 0.02
ATP2A3-210ENST00000572116 ANO8Q9HCE9 1232 aaPredicted RBP15.16■□□□□ 0.02
ATP2A3-210ENST00000572116 COL24A1Q17RW2 1714 aa15.15■□□□□ 0.02
ATP2A3-210ENST00000572116 ITPK1Q13572 414 aa15.15■□□□□ 0.02
ATP2A3-210ENST00000572116 SLC4A9Q96Q91 983 aa15.15■□□□□ 0.02
ATP2A3-210ENST00000572116 STK32BQ9NY57 414 aa15.15■□□□□ 0.02
ATP2A3-210ENST00000572116 MIS18AQ9NYP9 233 aa15.15■□□□□ 0.02
ATP2A3-210ENST00000572116 PSDA5PKW4 1024 aaPredicted RBP15.14■□□□□ 0.01
ATP2A3-210ENST00000572116 KCNQ3O43525 872 aa15.14■□□□□ 0.01
ATP2A3-210ENST00000572116 HEG1Q9ULI3 1381 aa15.13■□□□□ 0.01
ATP2A3-210ENST00000572116 HMGB2P26583 209 aaKnown RBP15.13■□□□□ 0.01
ATP2A3-210ENST00000572116 R3HDM1Q15032 1099 aaKnown RBP15.13■□□□□ 0.01
ATP2A3-210ENST00000572116 SLC15A2Q16348 729 aa15.13■□□□□ 0.01
ATP2A3-210ENST00000572116 ZNF827Q17R98 1081 aa15.13■□□□□ 0.01
ATP2A3-210ENST00000572116 LINC00116Q8NCU8 138 aa15.13■□□□□ 0.01
ATP2A3-210ENST00000572116 ZNF496Q96IT1 587 aaPredicted RBP15.13■□□□□ 0.01
ATP2A3-210ENST00000572116 FMNL2Q96PY5 1086 aa15.13■□□□□ 0.01
ATP2A3-210ENST00000572116 SALL2Q9Y467 1007 aaPredicted RBP15.13■□□□□ 0.01
ATP2A3-210ENST00000572116 LAS1LQ9Y4W2 734 aaKnown RBP15.13■□□□□ 0.01
ATP2A3-210ENST00000572116 BCORQ6W2J9 1755 aa15.13■□□□□ 0.01
ATP2A3-210ENST00000572116 NUP98P52948 1817 aa15.13■□□□□ 0.01
ATP2A3-210ENST00000572116 CCDC27Q2M243 656 aa15.12■□□□□ 0.01
ATP2A3-210ENST00000572116 AKT1S1Q96B36 256 aa15.12■□□□□ 0.01
ATP2A3-210ENST00000572116 TSPYL4Q9UJ04 414 aa15.12■□□□□ 0.01
ATP2A3-210ENST00000572116 CALD1Q05682 793 aaKnown RBP15.11■□□□□ 0.01
ATP2A3-210ENST00000572116 NCBP3Q53F19 620 aaKnown RBP15.11■□□□□ 0.01
ATP2A3-210ENST00000572116 DNAJC10Q8IXB1 793 aa15.11■□□□□ 0.01
ATP2A3-210ENST00000572116 VSIG10Q8N0Z9 540 aa15.11■□□□□ 0.01
ATP2A3-210ENST00000572116 AK7Q96M32 723 aa15.11■□□□□ 0.01
ATP2A3-210ENST00000572116 WWC1Q8IX03 1113 aa15.1■□□□□ 0.01
ATP2A3-210ENST00000572116 BABAM1Q9NWV8 329 aa15.1■□□□□ 0.01
ATP2A3-210ENST00000572116 TFCP2L1Q9NZI6 479 aa15.1■□□□□ 0.01
ATP2A3-210ENST00000572116 SCN7AQ01118 1682 aa15.09■□□□□ 0.01
ATP2A3-210ENST00000572116 NGEFQ8N5V2 710 aa15.09■□□□□ 0.01
ATP2A3-210ENST00000572116 CNTNAP4Q9C0A0 1308 aa15.09■□□□□ 0.01
ATP2A3-210ENST00000572116 LRP5O75197 1615 aa15.08■□□□□ 0
ATP2A3-210ENST00000572116 CHL1O00533 1208 aa15.08■□□□□ 0
ATP2A3-210ENST00000572116 CRKLP46109 303 aaKnown RBP15.08■□□□□ 0
ATP2A3-210ENST00000572116 EIF4A1P60842 406 aaKnown RBP15.08■□□□□ 0
ATP2A3-210ENST00000572116 GNAI1P63096 354 aa15.08■□□□□ 0
ATP2A3-210ENST00000572116 CFAP44Q96MT7 982 aa15.08■□□□□ 0
ATP2A3-210ENST00000572116 IFT57Q9NWB7 429 aa15.08■□□□□ 0
ATP2A3-210ENST00000572116 ANKRD36CQ5JPF3 1778 aa15.08■□□□□ 0
ATP2A3-210ENST00000572116 GNPATO15228 680 aa15.07■□□□□ 0
ATP2A3-210ENST00000572116 SNRPA1P09661 255 aaKnown RBP15.07■□□□□ 0
ATP2A3-210ENST00000572116 CYP19A1P11511 503 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 356.5 ms