RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 USP4Q13107 963 aa8.88□□□□□ -0.99
KARSP3-201ENST00000571212 ZNF837Q96EG3 531 aaPredicted RBP8.88□□□□□ -0.99
KARSP3-201ENST00000571212 XAGE2Q96GT9 111 aa8.88□□□□□ -0.99
KARSP3-201ENST00000571212 CHIC2Q9UKJ5 165 aa8.88□□□□□ -0.99
KARSP3-201ENST00000571212 HRH3Q9Y5N1 445 aa8.88□□□□□ -0.99
KARSP3-201ENST00000571212 CEP164Q9UPV0 1460 aa8.87□□□□□ -0.99
KARSP3-201ENST00000571212 SPATA31C2B4DYI2 1134 aa8.87□□□□□ -0.99
KARSP3-201ENST00000571212 GAS6Q14393 721 aa8.87□□□□□ -0.99
KARSP3-201ENST00000571212 ETNK1Q9HBU6 452 aa8.87□□□□□ -0.99
KARSP3-201ENST00000571212 DYRK1BQ9Y463 629 aa8.87□□□□□ -0.99
KARSP3-201ENST00000571212 WASLO00401 505 aaPredicted RBP8.86□□□□□ -0.99
KARSP3-201ENST00000571212 TAS1R3Q7RTX0 852 aa8.86□□□□□ -0.99
KARSP3-201ENST00000571212 TRIM22Q8IYM9 498 aa8.86□□□□□ -0.99
KARSP3-201ENST00000571212 PLPP7Q8NBV4 271 aa8.86□□□□□ -0.99
KARSP3-201ENST00000571212 ZSCAN10Q96SZ4 725 aaPredicted RBP8.86□□□□□ -0.99
KARSP3-201ENST00000571212 TIMMDC1Q9NPL8 285 aa8.86□□□□□ -0.99
KARSP3-201ENST00000571212 ZNF385CQ66K41 422 aaPredicted RBP8.85□□□□□ -0.99
KARSP3-201ENST00000571212 FHDC1Q9C0D6 1143 aaPredicted RBP8.85□□□□□ -0.99
KARSP3-201ENST00000571212 FANCD2Q9BXW9 1451 aa8.85□□□□□ -0.99
KARSP3-201ENST00000571212 GTPBP3Q969Y2 492 aaKnown RBP8.85□□□□□ -0.99
KARSP3-201ENST00000571212 GPAMQ9HCL2 828 aa8.84□□□□□ -0.99
KARSP3-201ENST00000571212 CFTRP13569 1480 aa8.83□□□□□ -1
KARSP3-201ENST00000571212 ADAMTS2O95450 1211 aa8.83□□□□□ -1
KARSP3-201ENST00000571212 SLURP2P0DP57 97 aa8.83□□□□□ -1
KARSP3-201ENST00000571212 TMEM214Q6NUQ4 689 aaKnown RBP8.83□□□□□ -1
KARSP3-201ENST00000571212 POM121CA8CG34 1229 aa8.82□□□□□ -1
KARSP3-201ENST00000571212 THBS1P07996 1170 aa8.82□□□□□ -1
KARSP3-201ENST00000571212 SCNN1DP51172 638 aa8.82□□□□□ -1
KARSP3-201ENST00000571212 C4orf17Q53FE4 359 aa8.82□□□□□ -1
KARSP3-201ENST00000571212 ESCO1Q5FWF5 840 aa8.82□□□□□ -1
KARSP3-201ENST00000571212 WDR44Q5JSH3 913 aa8.82□□□□□ -1
KARSP3-201ENST00000571212 SVOPQ8N4V2 548 aa8.82□□□□□ -1
KARSP3-201ENST00000571212 ALG2Q9H553 416 aa8.82□□□□□ -1
KARSP3-201ENST00000571212 F11P03951 625 aa8.81□□□□□ -1
KARSP3-201ENST00000571212 SOX11P35716 441 aa8.81□□□□□ -1
KARSP3-201ENST00000571212 LYPD4Q6UWN0 246 aa8.81□□□□□ -1
KARSP3-201ENST00000571212 SIRT1Q96EB6 747 aa8.81□□□□□ -1
KARSP3-201ENST00000571212 ADAMTS8Q9UP79 889 aa8.81□□□□□ -1
KARSP3-201ENST00000571212 GDF10P55107 478 aa8.8□□□□□ -1
KARSP3-201ENST00000571212 TLR1Q15399 786 aa8.8□□□□□ -1
KARSP3-201ENST00000571212 MAP7D1Q3KQU3 841 aa8.8□□□□□ -1
KARSP3-201ENST00000571212 H7C1W4 665 aa8.8□□□□□ -1
KARSP3-201ENST00000571212 RAD21O60216 631 aa8.8□□□□□ -1
KARSP3-201ENST00000571212 INHAP05111 366 aa8.8□□□□□ -1
KARSP3-201ENST00000571212 SKIP12755 728 aa8.8□□□□□ -1
KARSP3-201ENST00000571212 UBTFP17480 764 aaKnown RBP8.8□□□□□ -1
KARSP3-201ENST00000571212 GMCL1Q96IK5 515 aa8.8□□□□□ -1
KARSP3-201ENST00000571212 NUCKS1Q9H1E3 243 aaKnown RBP8.8□□□□□ -1
KARSP3-201ENST00000571212 SERTAD1Q9UHV2 236 aa8.8□□□□□ -1
KARSP3-201ENST00000571212 SRSF11Q05519 484 aaKnown RBP8.79□□□□□ -1
KARSP3-201ENST00000571212 GNASQ5JWF2 1037 aa8.79□□□□□ -1
KARSP3-201ENST00000571212 ADAMTS19Q8TE59 1207 aa8.79□□□□□ -1
KARSP3-201ENST00000571212 RUBCNLQ9H714 662 aa8.79□□□□□ -1
KARSP3-201ENST00000571212 TOP2AP11388 1531 aaKnown RBP8.79□□□□□ -1
KARSP3-201ENST00000571212 RSF1Q96T23 1441 aaPredicted RBP8.78□□□□□ -1
KARSP3-201ENST00000571212 URB2Q14146 1524 aaKnown RBP8.78□□□□□ -1
KARSP3-201ENST00000571212 FLIIQ13045 1269 aa8.78□□□□□ -1
KARSP3-201ENST00000571212 FOXR1Q6PIV2 292 aa8.78□□□□□ -1
KARSP3-201ENST00000571212 PPARGC1BQ86YN6 1023 aaKnown RBP8.78□□□□□ -1
KARSP3-201ENST00000571212 DEPDC4Q8N2C3 294 aa8.78□□□□□ -1
KARSP3-201ENST00000571212 PRDM2Q13029 1718 aa8.78□□□□□ -1
KARSP3-201ENST00000571212 TMEM229AB2RXF0 380 aa8.77□□□□□ -1.01
KARSP3-201ENST00000571212 ARHGEF15O94989 841 aa8.77□□□□□ -1.01
KARSP3-201ENST00000571212 MSX1P28360 303 aa8.77□□□□□ -1.01
KARSP3-201ENST00000571212 GTF2E1P29083 439 aaPredicted RBP8.77□□□□□ -1.01
KARSP3-201ENST00000571212 RHBDD1Q8TEB9 315 aa8.77□□□□□ -1.01
KARSP3-201ENST00000571212 MBIPQ9NS73 344 aa8.77□□□□□ -1.01
KARSP3-201ENST00000571212 PCDHGA11Q9Y5H2 935 aa8.77□□□□□ -1.01
KARSP3-201ENST00000571212 IGF1RP08069 1367 aa8.77□□□□□ -1.01
KARSP3-201ENST00000571212 A0A1B0GTH6 734 aa8.76□□□□□ -1.01
KARSP3-201ENST00000571212 GSK3AP49840 483 aa8.76□□□□□ -1.01
KARSP3-201ENST00000571212 CELA2BP08218 269 aaPredicted RBP8.75□□□□□ -1.01
KARSP3-201ENST00000571212 PLA2G4AP47712 749 aa8.75□□□□□ -1.01
KARSP3-201ENST00000571212 NCOA4Q13772 614 aa8.75□□□□□ -1.01
KARSP3-201ENST00000571212 WWC1Q8IX03 1113 aa8.75□□□□□ -1.01
KARSP3-201ENST00000571212 CLUAP1Q96AJ1 413 aa8.75□□□□□ -1.01
KARSP3-201ENST00000571212 SMTNP53814 917 aa8.75□□□□□ -1.01
KARSP3-201ENST00000571212 UBAP2LQ14157 1087 aaKnown RBP8.75□□□□□ -1.01
KARSP3-201ENST00000571212 EML3Q32P44 896 aa8.75□□□□□ -1.01
KARSP3-201ENST00000571212 TRERF1Q96PN7 1200 aa8.75□□□□□ -1.01
KARSP3-201ENST00000571212 USP3Q9Y6I4 520 aa8.75□□□□□ -1.01
KARSP3-201ENST00000571212 TMEM132AQ24JP5 1023 aa8.74□□□□□ -1.01
KARSP3-201ENST00000571212 HDGFL1Q5TGJ6 251 aa8.74□□□□□ -1.01
KARSP3-201ENST00000571212 MX2P20592 715 aa8.73□□□□□ -1.01
KARSP3-201ENST00000571212 KCNMA1Q12791 1236 aa8.73□□□□□ -1.01
KARSP3-201ENST00000571212 AIDAQ96BJ3 306 aa8.73□□□□□ -1.01
KARSP3-201ENST00000571212 USP17L5A8MUK1 530 aa8.72□□□□□ -1.01
KARSP3-201ENST00000571212 GTF2IP78347 998 aa8.72□□□□□ -1.01
KARSP3-201ENST00000571212 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.72□□□□□ -1.01
KARSP3-201ENST00000571212 ACDQ96AP0 544 aa8.72□□□□□ -1.01
KARSP3-201ENST00000571212 UCN2Q96RP3 112 aa8.72□□□□□ -1.01
KARSP3-201ENST00000571212 NOD1Q9Y239 953 aa8.72□□□□□ -1.01
KARSP3-201ENST00000571212 A6NJY4 79 aa8.71□□□□□ -1.01
KARSP3-201ENST00000571212 CSB-PGBD3P0DP91 1061 aa8.71□□□□□ -1.01
KARSP3-201ENST00000571212 PSME1Q06323 249 aa8.71□□□□□ -1.01
KARSP3-201ENST00000571212 TBC1D9Q6ZT07 1266 aa8.71□□□□□ -1.01
KARSP3-201ENST00000571212 PGBD3Q8N328 593 aa8.71□□□□□ -1.01
KARSP3-201ENST00000571212 SLC4A9Q96Q91 983 aa8.71□□□□□ -1.01
KARSP3-201ENST00000571212 MAP3K10Q02779 954 aa8.7□□□□□ -1.02
KARSP3-201ENST00000571212 ZNF295-AS1Q8N0V1 137 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms