RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 KDM2BQ8NHM5 1336 aa12.96□□□□□ -0.33
TCF4-243ENST00000569357 USHBP1Q8N6Y0 703 aa12.96□□□□□ -0.33
TCF4-243ENST00000569357 RAPGEF4Q8WZA2 1011 aa12.96□□□□□ -0.33
TCF4-243ENST00000569357 MEGF6O75095 1541 aa12.96□□□□□ -0.33
TCF4-243ENST00000569357 SBNO2Q9Y2G9 1366 aa12.95□□□□□ -0.34
TCF4-243ENST00000569357 SSFA2P28290 1259 aa12.95□□□□□ -0.34
TCF4-243ENST00000569357 TGFB2P61812 414 aa12.95□□□□□ -0.34
TCF4-243ENST00000569357 SMC1BQ8NDV3 1235 aa12.95□□□□□ -0.34
TCF4-243ENST00000569357 SMARCC1Q92922 1105 aaPredicted RBP12.95□□□□□ -0.34
TCF4-243ENST00000569357 PXDNLA1KZ92 1463 aa12.95□□□□□ -0.34
TCF4-243ENST00000569357 CICQ96RK0 1608 aaPredicted RBP12.95□□□□□ -0.34
TCF4-243ENST00000569357 KCPQ6ZWJ8 1503 aa12.94□□□□□ -0.34
TCF4-243ENST00000569357 GNPATO15228 680 aa12.94□□□□□ -0.34
TCF4-243ENST00000569357 DPEP1P16444 411 aa12.94□□□□□ -0.34
TCF4-243ENST00000569357 FBLN1P23142 703 aa12.94□□□□□ -0.34
TCF4-243ENST00000569357 HOXC9P31274 260 aa12.94□□□□□ -0.34
TCF4-243ENST00000569357 FARP1Q9Y4F1 1045 aaPredicted RBP12.94□□□□□ -0.34
TCF4-243ENST00000569357 NSD3Q9BZ95 1437 aa12.94□□□□□ -0.34
TCF4-243ENST00000569357 C4BP0C0L5 1744 aa12.93□□□□□ -0.34
TCF4-243ENST00000569357 TATP17735 454 aaPredicted RBP12.93□□□□□ -0.34
TCF4-243ENST00000569357 NBPF6Q5VWK0 638 aa12.93□□□□□ -0.34
TCF4-243ENST00000569357 NBPF4Q96M43 638 aa12.93□□□□□ -0.34
TCF4-243ENST00000569357 SLC12A5Q9H2X9 1139 aa12.93□□□□□ -0.34
TCF4-243ENST00000569357 RNF181Q9P0P0 153 aa12.93□□□□□ -0.34
TCF4-243ENST00000569357 PLEKHG2Q9H7P9 1386 aa12.93□□□□□ -0.34
TCF4-243ENST00000569357 MAP3K19Q56UN5 1328 aa12.92□□□□□ -0.34
TCF4-243ENST00000569357 LINC00116Q8NCU8 138 aa12.92□□□□□ -0.34
TCF4-243ENST00000569357 USP54Q70EL1 1684 aa12.92□□□□□ -0.34
TCF4-243ENST00000569357 PCDH11XQ9BZA7 1347 aa12.91□□□□□ -0.34
TCF4-243ENST00000569357 PCDH11YQ9BZA8 1340 aa12.91□□□□□ -0.34
TCF4-243ENST00000569357 MON2Q7Z3U7 1717 aa12.91□□□□□ -0.34
TCF4-243ENST00000569357 COG3Q96JB2 828 aa12.91□□□□□ -0.34
TCF4-243ENST00000569357 CCDC87Q9NVE4 849 aa12.91□□□□□ -0.34
TCF4-243ENST00000569357 TERF2IPQ9NYB0 399 aa12.91□□□□□ -0.34
TCF4-243ENST00000569357 ROCK2O75116 1388 aaKnown RBP12.91□□□□□ -0.34
TCF4-243ENST00000569357 CGNL1Q0VF96 1302 aa12.9□□□□□ -0.34
TCF4-243ENST00000569357 LOC102724428A0A0B4J2F2 783 aa12.9□□□□□ -0.34
TCF4-243ENST00000569357 SIK1P57059 783 aa12.9□□□□□ -0.34
TCF4-243ENST00000569357 FAM208AQ9UK61 1670 aaKnown RBP12.89□□□□□ -0.35
TCF4-243ENST00000569357 EDC4Q6P2E9 1401 aaKnown RBP12.89□□□□□ -0.35
TCF4-243ENST00000569357 ATP6V1AP38606 617 aa12.89□□□□□ -0.35
TCF4-243ENST00000569357 NLGN1Q8N2Q7 840 aa12.89□□□□□ -0.35
TCF4-243ENST00000569357 PIGBQ92521 554 aa12.89□□□□□ -0.35
TCF4-243ENST00000569357 TAF1LQ8IZX4 1826 aa12.89□□□□□ -0.35
TCF4-243ENST00000569357 CD163L1Q9NR16 1453 aa12.89□□□□□ -0.35
TCF4-243ENST00000569357 N4BP2Q86UW6 1770 aaPredicted RBP12.89□□□□□ -0.35
TCF4-243ENST00000569357 TOGARAM1Q9Y4F4 1720 aa12.88□□□□□ -0.35
TCF4-243ENST00000569357 TMF1P82094 1093 aa12.88□□□□□ -0.35
TCF4-243ENST00000569357 TRAPPC3LQ5T215 181 aa12.88□□□□□ -0.35
TCF4-243ENST00000569357 L3MBTL2Q969R5 705 aa12.88□□□□□ -0.35
TCF4-243ENST00000569357 PIM2Q9P1W9 311 aa12.88□□□□□ -0.35
TCF4-243ENST00000569357 PARP3Q9Y6F1 533 aa12.88□□□□□ -0.35
TCF4-243ENST00000569357 A0A1W2PP64 1363 aa12.87□□□□□ -0.35
TCF4-243ENST00000569357 CYP27B1O15528 508 aa12.87□□□□□ -0.35
TCF4-243ENST00000569357 ITPK1Q13572 414 aa12.87□□□□□ -0.35
TCF4-243ENST00000569357 RRS1Q15050 365 aaKnown RBP12.87□□□□□ -0.35
TCF4-243ENST00000569357 DALRD3Q5D0E6 543 aaKnown RBP12.87□□□□□ -0.35
TCF4-243ENST00000569357 UBR3Q6ZT12 1888 aa12.87□□□□□ -0.35
TCF4-243ENST00000569357 RGPD2P0DJD1 1756 aa12.86□□□□□ -0.35
TCF4-243ENST00000569357 RTCBQ9Y3I0 505 aaKnown RBP12.86□□□□□ -0.35
TCF4-243ENST00000569357 C10orf71Q711Q0 1435 aa12.86□□□□□ -0.35
TCF4-243ENST00000569357 SMG6Q86US8 1419 aaKnown RBP12.86□□□□□ -0.35
TCF4-243ENST00000569357 VEGFAP15692 232 aaPredicted RBP12.85□□□□□ -0.35
TCF4-243ENST00000569357 KCNA3P22001 575 aa12.85□□□□□ -0.35
TCF4-243ENST00000569357 DCAF5Q96JK2 942 aa12.85□□□□□ -0.35
TCF4-243ENST00000569357 TMOD3Q9NYL9 352 aa12.85□□□□□ -0.35
TCF4-243ENST00000569357 ASAP1Q9ULH1 1129 aa12.85□□□□□ -0.35
TCF4-243ENST00000569357 RFC4P35249 363 aa12.84□□□□□ -0.35
TCF4-243ENST00000569357 FAM161AQ3B820 660 aa12.84□□□□□ -0.35
TCF4-243ENST00000569357 MKRN1Q9UHC7 482 aaKnown RBP12.84□□□□□ -0.35
TCF4-243ENST00000569357 ARHGEF1Q92888 912 aaKnown RBP12.83□□□□□ -0.36
TCF4-243ENST00000569357 DCBLD2Q96PD2 775 aa12.83□□□□□ -0.36
TCF4-243ENST00000569357 KIAA1551Q9HCM1 1747 aa12.82□□□□□ -0.36
TCF4-243ENST00000569357 FOXN1O15353 648 aa12.82□□□□□ -0.36
TCF4-243ENST00000569357 CHRNA5P30532 468 aa12.82□□□□□ -0.36
TCF4-243ENST00000569357 RASSF7Q02833 373 aa12.82□□□□□ -0.36
TCF4-243ENST00000569357 HSP90AB2PQ58FF8 381 aa12.82□□□□□ -0.36
TCF4-243ENST00000569357 GYS1P13807 737 aa12.81□□□□□ -0.36
TCF4-243ENST00000569357 PCDH10Q9P2E7 1040 aa12.81□□□□□ -0.36
TCF4-243ENST00000569357 RTL1A6NKG5 1358 aa12.81□□□□□ -0.36
TCF4-243ENST00000569357 TNRC6CQ9HCJ0 1690 aaKnown RBP12.8□□□□□ -0.36
TCF4-243ENST00000569357 PKD1L3Q7Z443 1732 aa12.8□□□□□ -0.36
TCF4-243ENST00000569357 GLTPD2A6NH11 291 aa12.8□□□□□ -0.36
TCF4-243ENST00000569357 AIDAQ96BJ3 306 aa12.8□□□□□ -0.36
TCF4-243ENST00000569357 SPG7Q9UQ90 795 aa12.8□□□□□ -0.36
TCF4-243ENST00000569357 KIF13BQ9NQT8 1826 aa12.8□□□□□ -0.36
TCF4-243ENST00000569357 GGNBP2Q9H3C7 697 aa12.79□□□□□ -0.36
TCF4-243ENST00000569357 PRDM10Q9NQV6 1147 aa12.79□□□□□ -0.36
TCF4-243ENST00000569357 ATG3Q9NT62 314 aa12.79□□□□□ -0.36
TCF4-243ENST00000569357 LMNB1P20700 586 aa12.78□□□□□ -0.36
TCF4-243ENST00000569357 CTCFP49711 727 aaPredicted RBP12.78□□□□□ -0.36
TCF4-243ENST00000569357 NEUROD1Q13562 356 aa12.78□□□□□ -0.36
TCF4-243ENST00000569357 NKX1-1Q15270 411 aaPredicted RBP12.78□□□□□ -0.36
TCF4-243ENST00000569357 CARD11Q9BXL7 1154 aa12.78□□□□□ -0.36
TCF4-243ENST00000569357 C4AP0C0L4 1744 aa12.78□□□□□ -0.36
TCF4-243ENST00000569357 ITGB4P16144 1822 aa12.78□□□□□ -0.36
TCF4-243ENST00000569357 RPS6KA4O75676 772 aa12.77□□□□□ -0.37
TCF4-243ENST00000569357 SIN3AQ96ST3 1273 aa12.77□□□□□ -0.37
TCF4-243ENST00000569357 CREBZFQ9NS37 354 aa12.77□□□□□ -0.37
TCF4-243ENST00000569357 CLCN6P51797 869 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms