RNA–Protein interactions for RNA: ENST00000567114.5

RPUSD1-208, Transcript of RNA pseudouridylate synthase domain containing 1, human

TSL 2 BASIC

Gene RPUSD1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPUSD1-208	ENST00000567114	ERVV-2	B6SEH9	535 aa		33.17	■■■□□ 2.9
RPUSD1-208	ENST00000567114	SEPT12	Q8IYM1	358 aa		33.17	■■■□□ 2.9
RPUSD1-208	ENST00000567114	BABAM1	Q9NWV8	329 aa		33.17	■■■□□ 2.9
RPUSD1-208	ENST00000567114	RBM6	P78332	1123 aa	Known RBP	33.16	■■■□□ 2.9
RPUSD1-208	ENST00000567114	THSD7A	Q9UPZ6	1657 aa		33.15	■■■□□ 2.9
RPUSD1-208	ENST00000567114	RGS17	Q9UGC6	210 aa	Predicted RBP	33.15	■■■□□ 2.9
RPUSD1-208	ENST00000567114	KAT6B	Q8WYB5	2073 aa		33.13	■■■□□ 2.89
RPUSD1-208	ENST00000567114	RXRB	P28702	533 aa		33.1	■■■□□ 2.89
RPUSD1-208	ENST00000567114	RCAN3	Q9UKA8	241 aa		33.1	■■■□□ 2.89
RPUSD1-208	ENST00000567114	ELL2	O00472	640 aa	Predicted RBP	33.09	■■■□□ 2.89
RPUSD1-208	ENST00000567114	MRC1	P22897	1456 aa		33.09	■■■□□ 2.89
RPUSD1-208	ENST00000567114	C8orf58	Q8NAV2	365 aa		33.09	■■■□□ 2.89
RPUSD1-208	ENST00000567114	TMOD3	Q9NYL9	352 aa		33.09	■■■□□ 2.89
RPUSD1-208	ENST00000567114	SYTL4	Q96C24	671 aa	Predicted RBP	33.08	■■■□□ 2.89
RPUSD1-208	ENST00000567114	KCNQ3	O43525	872 aa		33.07	■■■□□ 2.89
RPUSD1-208	ENST00000567114	KRT24	Q2M2I5	525 aa		33.07	■■■□□ 2.89
RPUSD1-208	ENST00000567114	SIPA1L3	O60292	1781 aa	Predicted RBP	33.07	■■■□□ 2.88
RPUSD1-208	ENST00000567114	SLC39A6	Q13433	755 aa		33.07	■■■□□ 2.88
RPUSD1-208	ENST00000567114	TSPYL6	Q8N831	410 aa		33.07	■■■□□ 2.88
RPUSD1-208	ENST00000567114	ZNF790	Q6PG37	636 aa		33.05	■■■□□ 2.88
RPUSD1-208	ENST00000567114	POTEA	Q6S8J7	498 aa		33.05	■■■□□ 2.88
RPUSD1-208	ENST00000567114	TOGARAM1	Q9Y4F4	1720 aa		33.05	■■■□□ 2.88
RPUSD1-208	ENST00000567114	CT47B1	P0C2W7	299 aa	Predicted RBP	33.05	■■■□□ 2.88
RPUSD1-208	ENST00000567114	PRIM1	P49642	420 aa	Known RBP	33.05	■■■□□ 2.88
RPUSD1-208	ENST00000567114	TWISTNB	Q3B726	338 aa	Predicted RBP	33.05	■■■□□ 2.88
RPUSD1-208	ENST00000567114	ACSBG1	Q96GR2	724 aa		33.05	■■■□□ 2.88
RPUSD1-208	ENST00000567114	FAM182B	Q5T319	152 aa		33.04	■■■□□ 2.88
RPUSD1-208	ENST00000567114	PIGB	Q92521	554 aa		33.03	■■■□□ 2.88
RPUSD1-208	ENST00000567114	EIF4A1	P60842	406 aa	Known RBP	33.02	■■■□□ 2.88
RPUSD1-208	ENST00000567114	TTC5	Q8N0Z6	440 aa		33.02	■■■□□ 2.88
RPUSD1-208	ENST00000567114	SUPT16H	Q9Y5B9	1047 aa	Known RBP	33.02	■■■□□ 2.88
RPUSD1-208	ENST00000567114	VAMP4	O75379	141 aa		33.01	■■■□□ 2.87
RPUSD1-208	ENST00000567114	KDM3B	Q7LBC6	1761 aa		33	■■■□□ 2.87
RPUSD1-208	ENST00000567114	KRT27	Q7Z3Y8	459 aa		32.99	■■■□□ 2.87
RPUSD1-208	ENST00000567114	ITGB4	P16144	1822 aa		32.98	■■■□□ 2.87
RPUSD1-208	ENST00000567114	BCL9	O00512	1426 aa		32.97	■■■□□ 2.87
RPUSD1-208	ENST00000567114	DOT1L	Q8TEK3	1739 aa		32.97	■■■□□ 2.87
RPUSD1-208	ENST00000567114	RARS	P54136	660 aa	Known RBP	32.97	■■■□□ 2.87
RPUSD1-208	ENST00000567114	KCNQ2	O43526	872 aa		32.95	■■■□□ 2.87
RPUSD1-208	ENST00000567114	ZNF496	Q96IT1	587 aa	Predicted RBP	32.95	■■■□□ 2.86
RPUSD1-208	ENST00000567114	ASAP1	Q9ULH1	1129 aa		32.95	■■■□□ 2.86
RPUSD1-208	ENST00000567114	BCAR3	O75815	825 aa		32.94	■■■□□ 2.86
RPUSD1-208	ENST00000567114	ZNF428	Q96B54	188 aa		32.94	■■■□□ 2.86
RPUSD1-208	ENST00000567114	BCL2L13	Q9BXK5	485 aa		32.93	■■■□□ 2.86
RPUSD1-208	ENST00000567114	ATG3	Q9NT62	314 aa		32.93	■■■□□ 2.86
RPUSD1-208	ENST00000567114	BRWD3	Q6RI45	1802 aa		32.93	■■■□□ 2.86
RPUSD1-208	ENST00000567114	FMNL2	Q96PY5	1086 aa		32.92	■■■□□ 2.86
RPUSD1-208	ENST00000567114	SSH1	Q8WYL5	1049 aa		32.91	■■■□□ 2.86
RPUSD1-208	ENST00000567114	PTCD1	O75127	700 aa	Known RBP	32.91	■■■□□ 2.86
RPUSD1-208	ENST00000567114	GIGYF1	O75420	1035 aa	Predicted RBP	32.91	■■■□□ 2.86
RPUSD1-208	ENST00000567114	SMC4	Q9NTJ3	1288 aa		32.9	■■■□□ 2.86
RPUSD1-208	ENST00000567114	HEG1	Q9ULI3	1381 aa		32.9	■■■□□ 2.86
RPUSD1-208	ENST00000567114	SOS1	Q07889	1333 aa	Predicted RBP	32.89	■■■□□ 2.86
RPUSD1-208	ENST00000567114	TCERG1	O14776	1098 aa	Known RBP	32.89	■■■□□ 2.86
RPUSD1-208	ENST00000567114	ALDH1L2	Q3SY69	923 aa		32.88	■■■□□ 2.85
RPUSD1-208	ENST00000567114	FAM196A	Q6ZSG2	479 aa		32.88	■■■□□ 2.85
RPUSD1-208	ENST00000567114	EP400	Q96L91	3159 aa		32.88	■■■□□ 2.85
RPUSD1-208	ENST00000567114	RGS12	O14924	1447 aa		32.88	■■■□□ 2.85
RPUSD1-208	ENST00000567114	HOXB7	P09629	217 aa		32.88	■■■□□ 2.85
RPUSD1-208	ENST00000567114	NECTIN2	Q92692	538 aa		32.87	■■■□□ 2.85
RPUSD1-208	ENST00000567114	PRAMEF22	A3QJZ6	481 aa		32.86	■■■□□ 2.85
RPUSD1-208	ENST00000567114	EIF2S2	P20042	333 aa	Known RBP	32.86	■■■□□ 2.85
RPUSD1-208	ENST00000567114	SNRPA1	P09661	255 aa	Known RBP	32.86	■■■□□ 2.85
RPUSD1-208	ENST00000567114	HDGFL1	Q5TGJ6	251 aa		32.85	■■■□□ 2.85
RPUSD1-208	ENST00000567114	PTF1A	Q7RTS3	328 aa		32.85	■■■□□ 2.85
RPUSD1-208	ENST00000567114	RBM42	Q9BTD8	480 aa	Known RBP	32.84	■■■□□ 2.85
RPUSD1-208	ENST00000567114	PAPPA	Q13219	1627 aa		32.84	■■■□□ 2.85
RPUSD1-208	ENST00000567114	CCDC30	Q5VVM6	783 aa		32.84	■■■□□ 2.85
RPUSD1-208	ENST00000567114	PLIN1	O60240	522 aa		32.83	■■■□□ 2.85
RPUSD1-208	ENST00000567114	RRP1	P56182	461 aa	Known RBP	32.83	■■■□□ 2.85
RPUSD1-208	ENST00000567114	GTF3C3	Q9Y5Q9	886 aa		32.83	■■■□□ 2.85
RPUSD1-208	ENST00000567114	CHMP4A	Q9BY43	222 aa		32.82	■■■□□ 2.84
RPUSD1-208	ENST00000567114	KCP	Q6ZWJ8	1503 aa		32.82	■■■□□ 2.84
RPUSD1-208	ENST00000567114	RNF123	Q5XPI4	1314 aa		32.82	■■■□□ 2.84
RPUSD1-208	ENST00000567114	FRAT1	Q92837	279 aa	Predicted RBP	32.81	■■■□□ 2.84
RPUSD1-208	ENST00000567114	UBR2	Q8IWV8	1755 aa		32.8	■■■□□ 2.84
RPUSD1-208	ENST00000567114	STK31	Q9BXU1	1019 aa		32.8	■■■□□ 2.84
RPUSD1-208	ENST00000567114	SLC4A2	P04920	1241 aa		32.79	■■■□□ 2.84
RPUSD1-208	ENST00000567114	MRPL50	Q8N5N7	158 aa	Known RBP	32.79	■■■□□ 2.84
RPUSD1-208	ENST00000567114	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	32.79	■■■□□ 2.84
RPUSD1-208	ENST00000567114	CANX	P27824	592 aa	Known RBP	32.79	■■■□□ 2.84
RPUSD1-208	ENST00000567114	SMARCC1	Q92922	1105 aa	Predicted RBP	32.79	■■■□□ 2.84
RPUSD1-208	ENST00000567114	USP16	Q9Y5T5	823 aa		32.79	■■■□□ 2.84
RPUSD1-208	ENST00000567114	BCL11B	Q9C0K0	894 aa	Predicted RBP	32.78	■■■□□ 2.84
RPUSD1-208	ENST00000567114	SBF2	Q86WG5	1849 aa		32.77	■■■□□ 2.84
RPUSD1-208	ENST00000567114	NHS	Q6T4R5	1651 aa		32.77	■■■□□ 2.84
RPUSD1-208	ENST00000567114	VSIG10	Q8N0Z9	540 aa		32.77	■■■□□ 2.84
RPUSD1-208	ENST00000567114	BRPF1	P55201	1214 aa	Predicted RBP	32.76	■■■□□ 2.83
RPUSD1-208	ENST00000567114	NOB1	Q9ULX3	412 aa	Known RBP	32.76	■■■□□ 2.83
RPUSD1-208	ENST00000567114	PALLD	Q8WX93	1383 aa		32.75	■■■□□ 2.83
RPUSD1-208	ENST00000567114	TRIM37	O94972	964 aa		32.75	■■■□□ 2.83
RPUSD1-208	ENST00000567114	KIF16B	Q96L93	1317 aa		32.74	■■■□□ 2.83
RPUSD1-208	ENST00000567114	SLC4A9	Q96Q91	983 aa		32.74	■■■□□ 2.83
RPUSD1-208	ENST00000567114	CHPF2	Q9P2E5	772 aa		32.74	■■■□□ 2.83
RPUSD1-208	ENST00000567114	C5	P01031	1676 aa		32.73	■■■□□ 2.83
RPUSD1-208	ENST00000567114	IRX6	P78412	446 aa	Predicted RBP	32.73	■■■□□ 2.83
RPUSD1-208	ENST00000567114	NEFL	P07196	543 aa		32.72	■■■□□ 2.83
RPUSD1-208	ENST00000567114	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.72	■■■□□ 2.83
RPUSD1-208	ENST00000567114	DBF4	Q9UBU7	674 aa	Predicted RBP	32.72	■■■□□ 2.83
RPUSD1-208	ENST00000567114	LOC102724428	A0A0B4J2F2	783 aa		32.72	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms