RNA–Protein interactions for RNA: ENST00000566416.1

VAC14-207, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 3

Gene VAC14, Length 780 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-207ENST00000566416 DDRGK1Q96HY6 314 aa12.6□□□□□ -0.39
VAC14-207ENST00000566416 CCDC9Q9Y3X0 531 aaKnown RBP12.6□□□□□ -0.39
VAC14-207ENST00000566416 SLIT2O94813 1529 aa12.6□□□□□ -0.39
VAC14-207ENST00000566416 RGS12O14924 1447 aa12.6□□□□□ -0.39
VAC14-207ENST00000566416 NSD2O96028 1365 aa12.59□□□□□ -0.39
VAC14-207ENST00000566416 TTLL12Q14166 644 aaPredicted RBP12.59□□□□□ -0.39
VAC14-207ENST00000566416 NUTM2GQ5VZR2 741 aa12.59□□□□□ -0.39
VAC14-207ENST00000566416 ABTB2Q8N961 1025 aa12.59□□□□□ -0.39
VAC14-207ENST00000566416 CABP1Q9NZU7 370 aa12.59□□□□□ -0.39
VAC14-207ENST00000566416 KNSTRNQ9Y448 316 aa12.59□□□□□ -0.39
VAC14-207ENST00000566416 MON2Q7Z3U7 1717 aa12.59□□□□□ -0.39
VAC14-207ENST00000566416 RGPD5Q99666 1765 aa12.58□□□□□ -0.39
VAC14-207ENST00000566416 GLI3P10071 1580 aa12.58□□□□□ -0.4
VAC14-207ENST00000566416 GJD4Q96KN9 370 aaPredicted RBP12.58□□□□□ -0.4
VAC14-207ENST00000566416 FAM83GA6ND36 823 aa12.57□□□□□ -0.4
VAC14-207ENST00000566416 POTEB2H3BUK9 544 aa12.57□□□□□ -0.4
VAC14-207ENST00000566416 HOXB3P14651 431 aaPredicted RBP12.57□□□□□ -0.4
VAC14-207ENST00000566416 REPIN1Q9BWE0 567 aaKnown RBP12.56□□□□□ -0.4
VAC14-207ENST00000566416 PRDM11Q9NQV5 511 aa12.56□□□□□ -0.4
VAC14-207ENST00000566416 BTG4Q9NY30 223 aa12.56□□□□□ -0.4
VAC14-207ENST00000566416 TERF2IPQ9NYB0 399 aa12.56□□□□□ -0.4
VAC14-207ENST00000566416 ANKRD26Q9UPS8 1709 aa12.56□□□□□ -0.4
VAC14-207ENST00000566416 MYBBP1AQ9BQG0 1328 aaKnown RBP12.56□□□□□ -0.4
VAC14-207ENST00000566416 BRD4O60885 1362 aaPredicted RBP12.56□□□□□ -0.4
VAC14-207ENST00000566416 PIK3C2AO00443 1686 aa12.55□□□□□ -0.4
VAC14-207ENST00000566416 NUDT7P0C024 238 aa12.55□□□□□ -0.4
VAC14-207ENST00000566416 DOK7Q18PE1 504 aa12.55□□□□□ -0.4
VAC14-207ENST00000566416 GIGYF2Q6Y7W6 1299 aaKnown RBP12.55□□□□□ -0.4
VAC14-207ENST00000566416 NLRP13Q86W25 1043 aa12.55□□□□□ -0.4
VAC14-207ENST00000566416 KHSRPQ92945 711 aaKnown RBP eCLIP12.55□□□□□ -0.4
VAC14-207ENST00000566416 NRKQ7Z2Y5 1582 aa12.55□□□□□ -0.4
VAC14-207ENST00000566416 ZC3H6P61129 1189 aaKnown RBP12.54□□□□□ -0.4
VAC14-207ENST00000566416 VPS72Q15906 364 aa12.54□□□□□ -0.4
VAC14-207ENST00000566416 ARSIQ5FYB1 569 aa12.54□□□□□ -0.4
VAC14-207ENST00000566416 ZNF454Q8N9F8 522 aa12.54□□□□□ -0.4
VAC14-207ENST00000566416 USP6P35125 1406 aa12.54□□□□□ -0.4
VAC14-207ENST00000566416 LTN1O94822 1766 aa12.53□□□□□ -0.4
VAC14-207ENST00000566416 A0A0G2JS52 829 aa12.53□□□□□ -0.4
VAC14-207ENST00000566416 MS4A1P11836 297 aa12.53□□□□□ -0.4
VAC14-207ENST00000566416 MYT1Q01538 1121 aa12.53□□□□□ -0.4
VAC14-207ENST00000566416 C6orf132Q5T0Z8 1188 aa12.53□□□□□ -0.4
VAC14-207ENST00000566416 TMC1Q8TDI8 760 aa12.53□□□□□ -0.4
VAC14-207ENST00000566416 ZDHHC16Q969W1 377 aa12.53□□□□□ -0.4
VAC14-207ENST00000566416 TMUB1Q9BVT8 246 aa12.53□□□□□ -0.4
VAC14-207ENST00000566416 CGNL1Q0VF96 1302 aa12.53□□□□□ -0.4
VAC14-207ENST00000566416 INSRP06213 1382 aa12.53□□□□□ -0.4
VAC14-207ENST00000566416 KIAA0232Q92628 1395 aa12.53□□□□□ -0.4
VAC14-207ENST00000566416 CD163L1Q9NR16 1453 aa12.53□□□□□ -0.4
VAC14-207ENST00000566416 ZBTB7CA1YPR0 619 aa12.52□□□□□ -0.41
VAC14-207ENST00000566416 CHRNA2Q15822 529 aa12.52□□□□□ -0.41
VAC14-207ENST00000566416 HDGFL2Q7Z4V5 671 aaPredicted RBP12.52□□□□□ -0.41
VAC14-207ENST00000566416 PHOX2BQ99453 314 aa12.52□□□□□ -0.41
VAC14-207ENST00000566416 SLC12A5Q9H2X9 1139 aa12.52□□□□□ -0.41
VAC14-207ENST00000566416 KIF20BQ96Q89 1820 aa12.52□□□□□ -0.41
VAC14-207ENST00000566416 CPSF1Q10570 1443 aaKnown RBP12.52□□□□□ -0.41
VAC14-207ENST00000566416 EVA1CP58658 441 aa12.51□□□□□ -0.41
VAC14-207ENST00000566416 GPR153Q6NV75 609 aa12.51□□□□□ -0.41
VAC14-207ENST00000566416 ZSWIM6Q9HCJ5 1215 aa12.51□□□□□ -0.41
VAC14-207ENST00000566416 STRN4Q9NRL3 753 aa12.51□□□□□ -0.41
VAC14-207ENST00000566416 A0A1W2PP64 1363 aa12.51□□□□□ -0.41
VAC14-207ENST00000566416 NSD3Q9BZ95 1437 aa12.51□□□□□ -0.41
VAC14-207ENST00000566416 SEPT12Q8IYM1 358 aa12.5□□□□□ -0.41
VAC14-207ENST00000566416 CARD14Q9BXL6 1004 aa12.5□□□□□ -0.41
VAC14-207ENST00000566416 ADAM33Q9BZ11 813 aa12.5□□□□□ -0.41
VAC14-207ENST00000566416 EDC4Q6P2E9 1401 aaKnown RBP12.5□□□□□ -0.41
VAC14-207ENST00000566416 LMO7Q8WWI1 1683 aa12.5□□□□□ -0.41
VAC14-207ENST00000566416 TTC21BQ7Z4L5 1316 aa12.49□□□□□ -0.41
VAC14-207ENST00000566416 RIMBP2O15034 1052 aa12.49□□□□□ -0.41
VAC14-207ENST00000566416 GCP02774 474 aa12.49□□□□□ -0.41
VAC14-207ENST00000566416 CLCN1P35523 988 aa12.49□□□□□ -0.41
VAC14-207ENST00000566416 PADI6Q6TGC4 694 aa12.49□□□□□ -0.41
VAC14-207ENST00000566416 USP19O94966 1318 aa12.48□□□□□ -0.41
VAC14-207ENST00000566416 TTC21AQ8NDW8 1320 aa12.48□□□□□ -0.41
VAC14-207ENST00000566416 MDM2Q00987 491 aaPredicted RBP12.48□□□□□ -0.41
VAC14-207ENST00000566416 FAM98CQ17RN3 349 aaKnown RBP12.48□□□□□ -0.41
VAC14-207ENST00000566416 FAM161AQ3B820 660 aa12.48□□□□□ -0.41
VAC14-207ENST00000566416 WNK3Q9BYP7 1800 aa12.48□□□□□ -0.41
VAC14-207ENST00000566416 COL18A1P39060 1754 aa12.48□□□□□ -0.41
VAC14-207ENST00000566416 USP54Q70EL1 1684 aa12.48□□□□□ -0.41
VAC14-207ENST00000566416 SLIT3O75094 1523 aa12.47□□□□□ -0.41
VAC14-207ENST00000566416 KAT6BQ8WYB5 2073 aa12.47□□□□□ -0.41
VAC14-207ENST00000566416 CENPBP07199 599 aaPredicted RBP12.47□□□□□ -0.41
VAC14-207ENST00000566416 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.47□□□□□ -0.41
VAC14-207ENST00000566416 TTC13Q8NBP0 860 aa12.47□□□□□ -0.41
VAC14-207ENST00000566416 MRS2Q9HD23 443 aa12.47□□□□□ -0.41
VAC14-207ENST00000566416 GPCPD1Q9NPB8 672 aa12.47□□□□□ -0.41
VAC14-207ENST00000566416 CAMTA1Q9Y6Y1 1673 aa12.47□□□□□ -0.41
VAC14-207ENST00000566416 SSH2Q76I76 1423 aa12.46□□□□□ -0.41
VAC14-207ENST00000566416 CPDO75976 1380 aa12.46□□□□□ -0.41
VAC14-207ENST00000566416 RGPD1P0DJD0 1748 aa12.46□□□□□ -0.41
VAC14-207ENST00000566416 SPATA31A5Q5VU36 1347 aa12.46□□□□□ -0.41
VAC14-207ENST00000566416 SPATA31A7Q8IWB4 1347 aa12.46□□□□□ -0.41
VAC14-207ENST00000566416 METTL3Q86U44 580 aaKnown RBP12.46□□□□□ -0.41
VAC14-207ENST00000566416 KCNH5Q8NCM2 988 aa12.46□□□□□ -0.41
VAC14-207ENST00000566416 GOPCQ9HD26 462 aa12.46□□□□□ -0.41
VAC14-207ENST00000566416 SCUBE2Q9NQ36 999 aa12.46□□□□□ -0.41
VAC14-207ENST00000566416 USP35Q9P2H5 1018 aa12.46□□□□□ -0.41
VAC14-207ENST00000566416 RBM27Q9P2N5 1060 aaKnown RBP12.46□□□□□ -0.41
VAC14-207ENST00000566416 ADGRG1Q9Y653 693 aa12.46□□□□□ -0.41
VAC14-207ENST00000566416 THSD7AQ9UPZ6 1657 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms