RNA–Protein interactions for RNA: ENST00000566108.2

TNRC6A-211, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 3

Gene TNRC6A, Length 454 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-211ENST00000566108 COL23A1Q86Y22 540 aaPredicted RBP17.48■□□□□ 0.39
TNRC6A-211ENST00000566108 MTHFSP49914 203 aa17.47■□□□□ 0.39
TNRC6A-211ENST00000566108 CC2D1BQ5T0F9 858 aaKnown RBP17.47■□□□□ 0.39
TNRC6A-211ENST00000566108 COL24A1Q17RW2 1714 aa17.47■□□□□ 0.39
TNRC6A-211ENST00000566108 PHF14O94880 888 aa17.46■□□□□ 0.39
TNRC6A-211ENST00000566108 GPR162Q16538 588 aa17.46■□□□□ 0.39
TNRC6A-211ENST00000566108 POTEDQ86YR6 584 aa17.46■□□□□ 0.39
TNRC6A-211ENST00000566108 ASAP1Q9ULH1 1129 aa17.46■□□□□ 0.39
TNRC6A-211ENST00000566108 SSFA2P28290 1259 aa17.45■□□□□ 0.38
TNRC6A-211ENST00000566108 IL13P35225 146 aa17.45■□□□□ 0.38
TNRC6A-211ENST00000566108 MSL1Q68DK7 614 aa17.45■□□□□ 0.38
TNRC6A-211ENST00000566108 AEBP1Q8IUX7 1158 aa17.45■□□□□ 0.38
TNRC6A-211ENST00000566108 PELP1Q8IZL8 1130 aaKnown RBP17.45■□□□□ 0.38
TNRC6A-211ENST00000566108 RBM42Q9BTD8 480 aaKnown RBP17.45■□□□□ 0.38
TNRC6A-211ENST00000566108 KDRP35968 1356 aa17.44■□□□□ 0.38
TNRC6A-211ENST00000566108 GNPATO15228 680 aa17.44■□□□□ 0.38
TNRC6A-211ENST00000566108 NPC1L1Q9UHC9 1359 aa17.43■□□□□ 0.38
TNRC6A-211ENST00000566108 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.43■□□□□ 0.38
TNRC6A-211ENST00000566108 DIAPH1O60610 1272 aaKnown RBP17.43■□□□□ 0.38
TNRC6A-211ENST00000566108 CNGB1Q14028 1251 aaPredicted RBP17.43■□□□□ 0.38
TNRC6A-211ENST00000566108 ATG3Q9NT62 314 aa17.43■□□□□ 0.38
TNRC6A-211ENST00000566108 UBR3Q6ZT12 1888 aa17.43■□□□□ 0.38
TNRC6A-211ENST00000566108 CHD4Q14839 1912 aa17.43■□□□□ 0.38
TNRC6A-211ENST00000566108 PER1O15534 1290 aaPredicted RBP17.41■□□□□ 0.38
TNRC6A-211ENST00000566108 AKAP4Q5JQC9 854 aa17.41■□□□□ 0.38
TNRC6A-211ENST00000566108 LINC00116Q8NCU8 138 aa17.41■□□□□ 0.38
TNRC6A-211ENST00000566108 KDM6AO15550 1401 aaPredicted RBP17.4■□□□□ 0.38
TNRC6A-211ENST00000566108 CFAP53Q96M91 514 aa17.4■□□□□ 0.38
TNRC6A-211ENST00000566108 RTCBQ9Y3I0 505 aaKnown RBP17.4■□□□□ 0.38
TNRC6A-211ENST00000566108 ZNF831Q5JPB2 1677 aa17.39■□□□□ 0.37
TNRC6A-211ENST00000566108 HMOX1P09601 288 aa17.39■□□□□ 0.37
TNRC6A-211ENST00000566108 ITPK1Q13572 414 aa17.39■□□□□ 0.37
TNRC6A-211ENST00000566108 GRIN3BO60391 1043 aa17.38■□□□□ 0.37
TNRC6A-211ENST00000566108 TRAPPC3LQ5T215 181 aa17.38■□□□□ 0.37
TNRC6A-211ENST00000566108 CD2APQ9Y5K6 639 aa17.38■□□□□ 0.37
TNRC6A-211ENST00000566108 SCN11AQ9UI33 1791 aa17.38■□□□□ 0.37
TNRC6A-211ENST00000566108 U2SURPO15042 1029 aaKnown RBP17.37■□□□□ 0.37
TNRC6A-211ENST00000566108 NFATC2IPQ8NCF5 419 aa17.37■□□□□ 0.37
TNRC6A-211ENST00000566108 PTCD1O75127 700 aaKnown RBP17.36■□□□□ 0.37
TNRC6A-211ENST00000566108 RC3H1Q5TC82 1133 aaKnown RBP17.36■□□□□ 0.37
TNRC6A-211ENST00000566108 CNTNAP4Q9C0A0 1308 aa17.36■□□□□ 0.37
TNRC6A-211ENST00000566108 RFC4P35249 363 aa17.35■□□□□ 0.37
TNRC6A-211ENST00000566108 NLGN2Q8NFZ4 835 aa17.35■□□□□ 0.37
TNRC6A-211ENST00000566108 COL5A3P25940 1745 aaPredicted RBP17.34■□□□□ 0.37
TNRC6A-211ENST00000566108 NLGN1Q8N2Q7 840 aa17.34■□□□□ 0.37
TNRC6A-211ENST00000566108 SLC52A2Q9HAB3 445 aa17.34■□□□□ 0.37
TNRC6A-211ENST00000566108 NUDCQ9Y266 331 aa17.34■□□□□ 0.37
TNRC6A-211ENST00000566108 GAS2L2Q8NHY3 880 aa17.33■□□□□ 0.36
TNRC6A-211ENST00000566108 VIRMAQ69YN4 1812 aaKnown RBP17.33■□□□□ 0.36
TNRC6A-211ENST00000566108 RNMTO43148 476 aaKnown RBP17.31■□□□□ 0.36
TNRC6A-211ENST00000566108 RPS6KA4O75676 772 aa17.31■□□□□ 0.36
TNRC6A-211ENST00000566108 AMIGO3Q86WK7 504 aa17.31■□□□□ 0.36
TNRC6A-211ENST00000566108 TTC5Q8N0Z6 440 aa17.31■□□□□ 0.36
TNRC6A-211ENST00000566108 MMP10P09238 476 aa17.3■□□□□ 0.36
TNRC6A-211ENST00000566108 TEFQ10587 303 aa17.3■□□□□ 0.36
TNRC6A-211ENST00000566108 MTHFSDQ2M296 383 aaKnown RBP17.3■□□□□ 0.36
TNRC6A-211ENST00000566108 SMIM5Q71RC9 77 aa17.3■□□□□ 0.36
TNRC6A-211ENST00000566108 SLC4A9Q96Q91 983 aa17.3■□□□□ 0.36
TNRC6A-211ENST00000566108 MRC1P22897 1456 aa17.3■□□□□ 0.36
TNRC6A-211ENST00000566108 CRKLP46109 303 aaKnown RBP17.29■□□□□ 0.36
TNRC6A-211ENST00000566108 ZNF784Q8NCA9 323 aaPredicted RBP17.29■□□□□ 0.36
TNRC6A-211ENST00000566108 COL3A1P02461 1466 aaPredicted RBP17.29■□□□□ 0.36
TNRC6A-211ENST00000566108 GNAT3A8MTJ3 354 aa17.28■□□□□ 0.36
TNRC6A-211ENST00000566108 ARHGEF1Q92888 912 aaKnown RBP17.28■□□□□ 0.36
TNRC6A-211ENST00000566108 LGR6Q9HBX8 967 aa17.28■□□□□ 0.36
TNRC6A-211ENST00000566108 CCDC87Q9NVE4 849 aa17.28■□□□□ 0.36
TNRC6A-211ENST00000566108 PARP3Q9Y6F1 533 aa17.28■□□□□ 0.36
TNRC6A-211ENST00000566108 CICQ96RK0 1608 aaPredicted RBP17.28■□□□□ 0.36
TNRC6A-211ENST00000566108 UTRNP46939 3433 aa17.27■□□□□ 0.36
TNRC6A-211ENST00000566108 NEFMP07197 916 aa17.27■□□□□ 0.36
TNRC6A-211ENST00000566108 TJP1Q07157 1748 aa17.27■□□□□ 0.35
TNRC6A-211ENST00000566108 MYH14Q7Z406 1995 aaKnown RBP17.26■□□□□ 0.35
TNRC6A-211ENST00000566108 ZPR1O75312 459 aa17.26■□□□□ 0.35
TNRC6A-211ENST00000566108 C4AP0C0L4 1744 aa17.25■□□□□ 0.35
TNRC6A-211ENST00000566108 U2AF1L5P0DN76 240 aaPredicted RBP17.25■□□□□ 0.35
TNRC6A-211ENST00000566108 YBX3P16989 372 aaKnown RBP eCLIP17.25■□□□□ 0.35
TNRC6A-211ENST00000566108 U2AF1Q01081 240 aaKnown RBP eCLIP17.25■□□□□ 0.358e-10■■■□□ 14.8
TNRC6A-211ENST00000566108 ADAMTS7Q9UKP4 1686 aa17.24■□□□□ 0.35
TNRC6A-211ENST00000566108 STARD3NLO95772 234 aa17.24■□□□□ 0.35
TNRC6A-211ENST00000566108 GYS1P13807 737 aa17.24■□□□□ 0.35
TNRC6A-211ENST00000566108 PPP2R1AP30153 589 aa17.24■□□□□ 0.35
TNRC6A-211ENST00000566108 PRKAR2BP31323 418 aa17.24■□□□□ 0.35
TNRC6A-211ENST00000566108 SLC39A6Q13433 755 aa17.24■□□□□ 0.35
TNRC6A-211ENST00000566108 NPM2Q86SE8 214 aaKnown RBP17.24■□□□□ 0.35
TNRC6A-211ENST00000566108 DNAJC10Q8IXB1 793 aa17.24■□□□□ 0.35
TNRC6A-211ENST00000566108 VSIG10Q8N0Z9 540 aa17.24■□□□□ 0.35
TNRC6A-211ENST00000566108 RTF1Q92541 710 aaKnown RBP17.24■□□□□ 0.35
TNRC6A-211ENST00000566108 TGFB2P61812 414 aa17.23■□□□□ 0.35
TNRC6A-211ENST00000566108 USP42Q9H9J4 1324 aaKnown RBP17.22■□□□□ 0.35
TNRC6A-211ENST00000566108 TEX13AQ9BXU3 409 aaPredicted RBP17.22■□□□□ 0.35
TNRC6A-211ENST00000566108 KIF13BQ9NQT8 1826 aa17.21■□□□□ 0.35
TNRC6A-211ENST00000566108 KCPQ6ZWJ8 1503 aa17.21■□□□□ 0.34
TNRC6A-211ENST00000566108 A0A087WZG4 1122 aa17.2■□□□□ 0.34
TNRC6A-211ENST00000566108 FCHSD2O94868 740 aa17.2■□□□□ 0.34
TNRC6A-211ENST00000566108 CYP19A1P11511 503 aaPredicted RBP17.2■□□□□ 0.34
TNRC6A-211ENST00000566108 INTS5Q6P9B9 1019 aaKnown RBP17.2■□□□□ 0.34
TNRC6A-211ENST00000566108 RSPH6AQ9H0K4 717 aa17.2■□□□□ 0.34
TNRC6A-211ENST00000566108 WWC3Q9ULE0 1092 aa17.2■□□□□ 0.34
TNRC6A-211ENST00000566108 C10orf71Q711Q0 1435 aa17.2■□□□□ 0.34
TNRC6A-211ENST00000566108 UBR2Q8IWV8 1755 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms