RNA–Protein interactions for RNA: ENST00000565160.5

BBS4-208, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-208	ENST00000565160	PTPRG	P23470	1445 aa		7.7	□□□□□ -1.18
BBS4-208	ENST00000565160	PALM3	A6NDB9	673 aa	Predicted RBP	7.7	□□□□□ -1.18
BBS4-208	ENST00000565160	LCE2B	O14633	110 aa		7.7	□□□□□ -1.18
BBS4-208	ENST00000565160	MYT1	Q01538	1121 aa		7.7	□□□□□ -1.18
BBS4-208	ENST00000565160	CBLB	Q13191	982 aa		7.7	□□□□□ -1.18
BBS4-208	ENST00000565160	CCDC82	Q8N4S0	544 aa		7.7	□□□□□ -1.18
BBS4-208	ENST00000565160	NFATC2IP	Q8NCF5	419 aa		7.7	□□□□□ -1.18
BBS4-208	ENST00000565160	PPP1R12C	Q9BZL4	782 aa		7.7	□□□□□ -1.18
BBS4-208	ENST00000565160	CYLD	Q9NQC7	956 aa		7.7	□□□□□ -1.18
BBS4-208	ENST00000565160	TFIP11	Q9UBB9	837 aa	Known RBP	7.7	□□□□□ -1.18
BBS4-208	ENST00000565160	DOLK	Q9UPQ8	538 aa		7.7	□□□□□ -1.18
BBS4-208	ENST00000565160	USP17L5	A8MUK1	530 aa		7.69	□□□□□ -1.18
BBS4-208	ENST00000565160	ST8SIA5	O15466	376 aa		7.69	□□□□□ -1.18
BBS4-208	ENST00000565160	ATP9B	O43861	1147 aa		7.69	□□□□□ -1.18
BBS4-208	ENST00000565160	ADD1	P35611	737 aa	Known RBP	7.69	□□□□□ -1.18
BBS4-208	ENST00000565160	DEPDC4	Q8N2C3	294 aa		7.69	□□□□□ -1.18
BBS4-208	ENST00000565160	PGPEP1	Q9NXJ5	209 aa		7.69	□□□□□ -1.18
BBS4-208	ENST00000565160	PTPRT	O14522	1441 aa		7.69	□□□□□ -1.18
BBS4-208	ENST00000565160	BIVM-ERCC5	R4GMW8	1640 aa		7.68	□□□□□ -1.18
BBS4-208	ENST00000565160	CAPN5	O15484	640 aa	Predicted RBP	7.68	□□□□□ -1.18
BBS4-208	ENST00000565160	SMCP	P49901	116 aa	Predicted RBP	7.68	□□□□□ -1.18
BBS4-208	ENST00000565160	ERVK-9	P63128	1117 aa		7.68	□□□□□ -1.18
BBS4-208	ENST00000565160	OXLD1	Q5BKU9	147 aa		7.68	□□□□□ -1.18
BBS4-208	ENST00000565160	CFAP70	Q5T0N1	1121 aa		7.68	□□□□□ -1.18
BBS4-208	ENST00000565160	CCDC125	Q86Z20	511 aa		7.68	□□□□□ -1.18
BBS4-208	ENST00000565160	MAFB	Q9Y5Q3	323 aa	Predicted RBP	7.68	□□□□□ -1.18
BBS4-208	ENST00000565160	WDR7	Q9Y4E6	1490 aa		7.68	□□□□□ -1.18
BBS4-208	ENST00000565160	NCOA4	Q13772	614 aa		7.67	□□□□□ -1.18
BBS4-208	ENST00000565160	MAP7D1	Q3KQU3	841 aa		7.67	□□□□□ -1.18
BBS4-208	ENST00000565160	CC2D2B	Q6DHV5	1058 aa		7.67	□□□□□ -1.18
BBS4-208	ENST00000565160		Q6ZNB5	142 aa		7.67	□□□□□ -1.18
BBS4-208	ENST00000565160	CRIPAK	Q8N1N5	446 aa		7.67	□□□□□ -1.18
BBS4-208	ENST00000565160	AAAS	Q9NRG9	546 aa		7.67	□□□□□ -1.18
BBS4-208	ENST00000565160	DACH1	Q9UI36	760 aa		7.67	□□□□□ -1.18
BBS4-208	ENST00000565160	SETD1A	O15047	1707 aa	Known RBP	7.66	□□□□□ -1.18
BBS4-208	ENST00000565160	RICTOR	Q6R327	1708 aa		7.66	□□□□□ -1.18
BBS4-208	ENST00000565160	USP17L3	A6NCW0	530 aa		7.66	□□□□□ -1.18
BBS4-208	ENST00000565160	USP17L4	A6NCW7	530 aa		7.66	□□□□□ -1.18
BBS4-208	ENST00000565160	CTC1	Q2NKJ3	1217 aa		7.66	□□□□□ -1.18
BBS4-208	ENST00000565160	USP17L2	Q6R6M4	530 aa		7.66	□□□□□ -1.18
BBS4-208	ENST00000565160		Q6ZVU0	165 aa		7.66	□□□□□ -1.18
BBS4-208	ENST00000565160	USP17L1	Q7RTZ2	530 aa		7.66	□□□□□ -1.18
BBS4-208	ENST00000565160	KDF1	Q8NAX2	398 aa	Predicted RBP	7.66	□□□□□ -1.18
BBS4-208	ENST00000565160	OSBPL3	Q9H4L5	887 aa		7.66	□□□□□ -1.18
BBS4-208	ENST00000565160	CD109	Q6YHK3	1445 aa		7.66	□□□□□ -1.18
BBS4-208	ENST00000565160	UACA	Q9BZF9	1416 aa		7.66	□□□□□ -1.18
BBS4-208	ENST00000565160	ARHGEF40	Q8TER5	1519 aa		7.66	□□□□□ -1.18
BBS4-208	ENST00000565160	AXIN1	O15169	862 aa		7.65	□□□□□ -1.18
BBS4-208	ENST00000565160	LMOD1	P29536	600 aa	Predicted RBP	7.65	□□□□□ -1.18
BBS4-208	ENST00000565160	PLEKHM2	Q8IWE5	1019 aa		7.65	□□□□□ -1.18
BBS4-208	ENST00000565160	MEIOB	Q8N635	442 aa		7.65	□□□□□ -1.18
BBS4-208	ENST00000565160	CCDC97	Q96F63	343 aa	Predicted RBP	7.65	□□□□□ -1.18
BBS4-208	ENST00000565160	AGBL1	Q96MI9	1066 aa		7.65	□□□□□ -1.18
BBS4-208	ENST00000565160	RGS17	Q9UGC6	210 aa	Predicted RBP	7.65	□□□□□ -1.18
BBS4-208	ENST00000565160	ALK	Q9UM73	1620 aa		7.64	□□□□□ -1.19
BBS4-208	ENST00000565160	TNIK	Q9UKE5	1360 aa		7.64	□□□□□ -1.19
BBS4-208	ENST00000565160	ADH1A	P07327	375 aa		7.64	□□□□□ -1.19
BBS4-208	ENST00000565160	BMP1	P13497	986 aa		7.64	□□□□□ -1.19
BBS4-208	ENST00000565160	RFX1	P22670	979 aa		7.64	□□□□□ -1.19
BBS4-208	ENST00000565160	EML3	Q32P44	896 aa		7.64	□□□□□ -1.19
BBS4-208	ENST00000565160	TRIM46	Q7Z4K8	759 aa		7.64	□□□□□ -1.19
BBS4-208	ENST00000565160	SERPINA10	Q9UK55	444 aa		7.64	□□□□□ -1.19
BBS4-208	ENST00000565160	ARID3A	Q99856	593 aa		7.63	□□□□□ -1.19
BBS4-208	ENST00000565160	DISP1	Q96F81	1524 aa		7.62	□□□□□ -1.19
BBS4-208	ENST00000565160	WRN	Q14191	1432 aa	Predicted RBP eCLIP	7.62	□□□□□ -1.19
BBS4-208	ENST00000565160	LZTS3	O60299	673 aa	Predicted RBP	7.62	□□□□□ -1.19
BBS4-208	ENST00000565160	STAU1	O95793	577 aa	Known RBP	7.62	□□□□□ -1.19
BBS4-208	ENST00000565160	MYC	P01106	439 aa	Predicted RBP	7.62	□□□□□ -1.19
BBS4-208	ENST00000565160	USP4	Q13107	963 aa		7.62	□□□□□ -1.19
BBS4-208	ENST00000565160	KANK4	Q5T7N3	995 aa	Predicted RBP	7.62	□□□□□ -1.19
BBS4-208	ENST00000565160	MKRN1	Q9UHC7	482 aa	Known RBP	7.62	□□□□□ -1.19
BBS4-208	ENST00000565160	HSPA1L	P34931	641 aa		7.61	□□□□□ -1.19
BBS4-208	ENST00000565160	SRPK2	P78362	688 aa	Known RBP	7.61	□□□□□ -1.19
BBS4-208	ENST00000565160	RELB	Q01201	579 aa		7.61	□□□□□ -1.19
BBS4-208	ENST00000565160	MRPL14	Q6P1L8	145 aa	Known RBP	7.61	□□□□□ -1.19
BBS4-208	ENST00000565160	NOD1	Q9Y239	953 aa		7.61	□□□□□ -1.19
BBS4-208	ENST00000565160	PCDHGA11	Q9Y5H2	935 aa		7.61	□□□□□ -1.19
BBS4-208	ENST00000565160	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	7.6	□□□□□ -1.19
BBS4-208	ENST00000565160	GTF2I	P78347	998 aa		7.6	□□□□□ -1.19
BBS4-208	ENST00000565160	CLDN10	P78369	228 aa		7.6	□□□□□ -1.19
BBS4-208	ENST00000565160	CDCA8	Q53HL2	280 aa		7.6	□□□□□ -1.19
BBS4-208	ENST00000565160	LINC00528	Q8N1L1	170 aa		7.6	□□□□□ -1.19
BBS4-208	ENST00000565160	SIRT1	Q96EB6	747 aa		7.6	□□□□□ -1.19
BBS4-208	ENST00000565160	ATP13A2	Q9NQ11	1180 aa		7.6	□□□□□ -1.19
BBS4-208	ENST00000565160	KIAA1024	Q9UPX6	916 aa		7.6	□□□□□ -1.19
BBS4-208	ENST00000565160	ABCA9	Q8IUA7	1624 aa		7.6	□□□□□ -1.19
BBS4-208	ENST00000565160	ARHGEF12	Q9NZN5	1544 aa		7.59	□□□□□ -1.19
BBS4-208	ENST00000565160	ATP5J2-PTCD1	G3V325	749 aa		7.59	□□□□□ -1.19
BBS4-208	ENST00000565160	ZBTB7B	O15156	539 aa	Predicted RBP	7.59	□□□□□ -1.19
BBS4-208	ENST00000565160	PTGIR	P43119	386 aa		7.59	□□□□□ -1.19
BBS4-208	ENST00000565160	C6orf118	Q5T5N4	469 aa		7.59	□□□□□ -1.19
BBS4-208	ENST00000565160	CYP2U1	Q7Z449	544 aa		7.59	□□□□□ -1.19
BBS4-208	ENST00000565160	PURB	Q96QR8	312 aa	Known RBP	7.59	□□□□□ -1.19
BBS4-208	ENST00000565160	ZNF395	Q9H8N7	513 aa	Predicted RBP	7.59	□□□□□ -1.19
BBS4-208	ENST00000565160	RAB6B	Q9NRW1	208 aa		7.59	□□□□□ -1.19
BBS4-208	ENST00000565160	ZFP42	Q96MM3	310 aa		7.58	□□□□□ -1.2
BBS4-208	ENST00000565160	TSEN34	Q9BSV6	310 aa	Known RBP	7.58	□□□□□ -1.2
BBS4-208	ENST00000565160	ESF1	Q9H501	851 aa	Known RBP	7.58	□□□□□ -1.2
BBS4-208	ENST00000565160	ARHGEF10L	Q9HCE6	1279 aa		7.58	□□□□□ -1.2
BBS4-208	ENST00000565160		A0A1W2PRU2	124 aa		7.57	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms