RNA–Protein interactions for RNA: ENST00000565160.5

BBS4-208, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-208ENST00000565160 AEBP2Q6ZN18 517 aaPredicted RBP20.52■□□□□ 0.88
BBS4-208ENST00000565160 CHIC1Q5VXU3 224 aa20.06■□□□□ 0.8
BBS4-208ENST00000565160 PHF23Q9BUL5 403 aaPredicted RBP17.7■□□□□ 0.42
BBS4-208ENST00000565160 SENP3Q9H4L4 574 aaPredicted RBP17.3■□□□□ 0.36
BBS4-208ENST00000565160 PLPPR3Q6T4P5 718 aa16.28■□□□□ 0.2
BBS4-208ENST00000565160 FOXD1Q16676 465 aa16.11■□□□□ 0.17
BBS4-208ENST00000565160 PPP6R1Q9UPN7 881 aa15.6■□□□□ 0.09
BBS4-208ENST00000565160 ADRA2BP18089 450 aa15.57■□□□□ 0.08
BBS4-208ENST00000565160 PIAS4Q8N2W9 510 aaPredicted RBP15.17■□□□□ 0.02
BBS4-208ENST00000565160 MSH5O43196 834 aa14.75□□□□□ -0.05
BBS4-208ENST00000565160 PPP4R3CPQ6ZMV5 832 aa14.39□□□□□ -0.11
BBS4-208ENST00000565160 KCNA4P22459 653 aa14.19□□□□□ -0.14
BBS4-208ENST00000565160 MAPK8IP2Q13387 824 aaPredicted RBP14.12□□□□□ -0.15
BBS4-208ENST00000565160 SCAF1Q9H7N4 1312 aaKnown RBP14.12□□□□□ -0.15
BBS4-208ENST00000565160 NCBP3Q53F19 620 aaKnown RBP13.96□□□□□ -0.17
BBS4-208ENST00000565160 CNKSR2Q8WXI2 1034 aa13.94□□□□□ -0.18
BBS4-208ENST00000565160 NPM3O75607 178 aaKnown RBP13.85□□□□□ -0.19
BBS4-208ENST00000565160 DMRT2Q9Y5R5 561 aa13.85□□□□□ -0.19
BBS4-208ENST00000565160 RNF216Q9NWF9 866 aaPredicted RBP13.65□□□□□ -0.22
BBS4-208ENST00000565160 HOXD11P31277 338 aaPredicted RBP13.6□□□□□ -0.23
BBS4-208ENST00000565160 SLC4A1APQ9BWU0 796 aaKnown RBP13.48□□□□□ -0.25
BBS4-208ENST00000565160 DNAJC5BQ9UF47 199 aa13.39□□□□□ -0.27
BBS4-208ENST00000565160 POTEDQ86YR6 584 aa13.35□□□□□ -0.27
BBS4-208ENST00000565160 DCAF8L1A6NGE4 600 aa13.22□□□□□ -0.29
BBS4-208ENST00000565160 EHMT2Q96KQ7 1210 aa13.22□□□□□ -0.29
BBS4-208ENST00000565160 ZBTB22O15209 634 aa13.09□□□□□ -0.31
BBS4-208ENST00000565160 SLC4A2P04920 1241 aa13.08□□□□□ -0.32
BBS4-208ENST00000565160 CSRNP3Q8WYN3 585 aa13.06□□□□□ -0.32
BBS4-208ENST00000565160 FOXD4L1Q9NU39 408 aa12.99□□□□□ -0.33
BBS4-208ENST00000565160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.92□□□□□ -0.34
BBS4-208ENST00000565160 U3KPZ7 1027 aaPredicted RBP12.79□□□□□ -0.36
BBS4-208ENST00000565160 MYCNP04198 464 aaPredicted RBP12.76□□□□□ -0.37
BBS4-208ENST00000565160 RNF39Q9H2S5 420 aa12.69□□□□□ -0.38
BBS4-208ENST00000565160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.54□□□□□ -0.4
BBS4-208ENST00000565160 HNRNPUL2Q1KMD3 747 aaKnown RBP12.54□□□□□ -0.4
BBS4-208ENST00000565160 SAMD1Q6SPF0 538 aaPredicted RBP12.52□□□□□ -0.41
BBS4-208ENST00000565160 C1QBPQ07021 282 aaKnown RBP12.5□□□□□ -0.41
BBS4-208ENST00000565160 ATXN8OSP0DMR3 200 aa12.49□□□□□ -0.41
BBS4-208ENST00000565160 ATF5Q9Y2D1 282 aaPredicted RBP12.49□□□□□ -0.41
BBS4-208ENST00000565160 SPINK5Q9NQ38 1064 aaPredicted RBP12.42□□□□□ -0.42
BBS4-208ENST00000565160 APLP2Q06481 763 aa12.37□□□□□ -0.43
BBS4-208ENST00000565160 CAPN15O75808 1086 aa12.31□□□□□ -0.44
BBS4-208ENST00000565160 TRHP20396 242 aaPredicted RBP12.28□□□□□ -0.44
BBS4-208ENST00000565160 CACNB1Q02641 598 aaPredicted RBP12.27□□□□□ -0.45
BBS4-208ENST00000565160 ZNF219Q9P2Y4 722 aaPredicted RBP12.24□□□□□ -0.45
BBS4-208ENST00000565160 ABCB7O75027 752 aa12.12□□□□□ -0.47
BBS4-208ENST00000565160 DSG3P32926 999 aa12.11□□□□□ -0.47
BBS4-208ENST00000565160 POLA2Q14181 598 aa12.1□□□□□ -0.47
BBS4-208ENST00000565160 MKRN4PQ13434 485 aaPredicted RBP11.94□□□□□ -0.5
BBS4-208ENST00000565160 FBLN2P98095 1184 aa11.85□□□□□ -0.51
BBS4-208ENST00000565160 ZBTB12Q9Y330 459 aaPredicted RBP11.83□□□□□ -0.52
BBS4-208ENST00000565160 FKBP8Q14318 412 aa11.77□□□□□ -0.53
BBS4-208ENST00000565160 OSCARQ8IYS5 282 aa11.71□□□□□ -0.53
BBS4-208ENST00000565160 SPDYE4A6NLX3 237 aa11.65□□□□□ -0.54
BBS4-208ENST00000565160 SPDYE2BA6NHP3 402 aa11.56□□□□□ -0.56
BBS4-208ENST00000565160 SPDYE6P0CI01 402 aa11.56□□□□□ -0.56
BBS4-208ENST00000565160 SPDYE2Q495Y8 402 aa11.56□□□□□ -0.56
BBS4-208ENST00000565160 ZNF692Q9BU19 519 aaPredicted RBP11.54□□□□□ -0.56
BBS4-208ENST00000565160 SSUH2Q9Y2M2 353 aa11.52□□□□□ -0.57
BBS4-208ENST00000565160 PROM2Q8N271 834 aa11.5□□□□□ -0.57
BBS4-208ENST00000565160 RBM42Q9BTD8 480 aaKnown RBP11.47□□□□□ -0.57
BBS4-208ENST00000565160 PABPN1Q86U42 306 aaKnown RBP eCLIP11.41□□□□□ -0.58
BBS4-208ENST00000565160 AKT1S1Q96B36 256 aa11.37□□□□□ -0.59
BBS4-208ENST00000565160 REM2Q8IYK8 340 aaPredicted RBP11.29□□□□□ -0.6
BBS4-208ENST00000565160 FBXO3Q9UK99 471 aa11.24□□□□□ -0.61
BBS4-208ENST00000565160 SPDYE1Q8NFV5 336 aaPredicted RBP11.2□□□□□ -0.62
BBS4-208ENST00000565160 PITPNM1O00562 1244 aa11.17□□□□□ -0.62
BBS4-208ENST00000565160 STAG3Q9UJ98 1225 aa11.17□□□□□ -0.62
BBS4-208ENST00000565160 CLEC11AQ9Y240 323 aa11.16□□□□□ -0.62
BBS4-208ENST00000565160 VASPP50552 380 aaPredicted RBP11.15□□□□□ -0.62
BBS4-208ENST00000565160 PRR29P0C7W0 189 aa11.06□□□□□ -0.64
BBS4-208ENST00000565160 IFNLR1Q8IU57 520 aaPredicted RBP11.04□□□□□ -0.64
BBS4-208ENST00000565160 MIER1Q8N108 512 aa11.02□□□□□ -0.65
BBS4-208ENST00000565160 CHRDL2Q6WN34 429 aa11□□□□□ -0.65
BBS4-208ENST00000565160 PLCD3Q8N3E9 789 aa11□□□□□ -0.65
BBS4-208ENST00000565160 CREBZFQ9NS37 354 aa10.99□□□□□ -0.65
BBS4-208ENST00000565160 FXR2P51116 673 aaKnown RBP eCLIP10.94□□□□□ -0.66
BBS4-208ENST00000565160 CHADLQ6NUI6 762 aa10.93□□□□□ -0.66
BBS4-208ENST00000565160 NISCHQ9Y2I1 1504 aa10.92□□□□□ -0.66
BBS4-208ENST00000565160 KLHL34Q8N239 644 aa10.91□□□□□ -0.66
BBS4-208ENST00000565160 MNX1P50219 401 aaPredicted RBP10.9□□□□□ -0.66
BBS4-208ENST00000565160 PIP4P2Q8N4L2 257 aa10.9□□□□□ -0.66
BBS4-208ENST00000565160 PLEKHG5O94827 1062 aa10.89□□□□□ -0.67
BBS4-208ENST00000565160 PRKAR2AP13861 404 aaKnown RBP10.88□□□□□ -0.67
BBS4-208ENST00000565160 RTN4Q9NQC3 1192 aaKnown RBP10.87□□□□□ -0.67
BBS4-208ENST00000565160 SPOCK2Q92563 424 aa10.85□□□□□ -0.67
BBS4-208ENST00000565160 ZBTB47Q9UFB7 747 aaPredicted RBP10.83□□□□□ -0.68
BBS4-208ENST00000565160 AMER1Q5JTC6 1135 aaPredicted RBP10.82□□□□□ -0.68
BBS4-208ENST00000565160 FARP1Q9Y4F1 1045 aaPredicted RBP10.8□□□□□ -0.68
BBS4-208ENST00000565160 ABCC9O60706 1549 aa10.79□□□□□ -0.68
BBS4-208ENST00000565160 NUBP1P53384 320 aa10.78□□□□□ -0.68
BBS4-208ENST00000565160 NPM1P06748 294 aaKnown RBP eCLIP10.73□□□□□ -0.69
BBS4-208ENST00000565160 RASEFQ8IZ41 740 aa10.72□□□□□ -0.69
BBS4-208ENST00000565160 PKD2Q13563 968 aa10.71□□□□□ -0.69
BBS4-208ENST00000565160 CIZ1Q9ULV3 898 aaPredicted RBP10.67□□□□□ -0.7
BBS4-208ENST00000565160 DCAF8Q5TAQ9 597 aa10.64□□□□□ -0.71
BBS4-208ENST00000565160 FAM212AQ96EL1 285 aa10.63□□□□□ -0.71
BBS4-208ENST00000565160 GSE1Q14687 1217 aa10.62□□□□□ -0.71
BBS4-208ENST00000565160 TSPYL2Q9H2G4 693 aaPredicted RBP10.62□□□□□ -0.71
BBS4-208ENST00000565160 ECM2O94769 699 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms