RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 SRCIN1Q9C0H9 1055 aa24.8■■□□□ 1.56
MAP1LC3B-206ENST00000564844 HMMRO75330 724 aa24.79■■□□□ 1.56
MAP1LC3B-206ENST00000564844 MCCP23508 829 aa24.79■■□□□ 1.56
MAP1LC3B-206ENST00000564844 PPP4R3BQ5MIZ7 849 aa24.78■■□□□ 1.56
MAP1LC3B-206ENST00000564844 UHRF1BP1LA0JNW5 1464 aa24.78■■□□□ 1.56
MAP1LC3B-206ENST00000564844 KIDINS220Q9ULH0 1771 aa24.78■■□□□ 1.56
MAP1LC3B-206ENST00000564844 MX1P20591 662 aa24.77■■□□□ 1.56
MAP1LC3B-206ENST00000564844 CHMLP26374 656 aa24.77■■□□□ 1.56
MAP1LC3B-206ENST00000564844 MYRIPQ8NFW9 859 aa24.77■■□□□ 1.56
MAP1LC3B-206ENST00000564844 TCHHQ07283 1943 aa24.77■■□□□ 1.56
MAP1LC3B-206ENST00000564844 ABCC3O15438 1527 aa24.76■■□□□ 1.55
MAP1LC3B-206ENST00000564844 CCDC94Q9BW85 323 aaPredicted RBP24.75■■□□□ 1.55
MAP1LC3B-206ENST00000564844 NEURL4Q96JN8 1562 aa24.75■■□□□ 1.55
MAP1LC3B-206ENST00000564844 ATP2B3Q16720 1220 aa24.75■■□□□ 1.55
MAP1LC3B-206ENST00000564844 LRRCC1Q9C099 1032 aa24.75■■□□□ 1.55
MAP1LC3B-206ENST00000564844 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.75■■□□□ 1.55
MAP1LC3B-206ENST00000564844 FKBP5Q13451 457 aaPredicted RBP24.74■■□□□ 1.55
MAP1LC3B-206ENST00000564844 HSP90AB2PQ58FF8 381 aa24.74■■□□□ 1.55
MAP1LC3B-206ENST00000564844 TSPYL4Q9UJ04 414 aa24.73■■□□□ 1.55
MAP1LC3B-206ENST00000564844 MAP2P11137 1827 aaKnown RBP24.73■■□□□ 1.55
MAP1LC3B-206ENST00000564844 CUL4AQ13619 759 aa24.72■■□□□ 1.55
MAP1LC3B-206ENST00000564844 PIBF1Q8WXW3 757 aa24.72■■□□□ 1.55
MAP1LC3B-206ENST00000564844 POGZQ7Z3K3 1410 aa24.72■■□□□ 1.55
MAP1LC3B-206ENST00000564844 EIF4A2Q14240 407 aaKnown RBP24.72■■□□□ 1.55
MAP1LC3B-206ENST00000564844 ARHGEF40Q8TER5 1519 aa24.72■■□□□ 1.55
MAP1LC3B-206ENST00000564844 AP5Z1O43299 807 aa24.72■■□□□ 1.55
MAP1LC3B-206ENST00000564844 GNAI2P04899 355 aa24.72■■□□□ 1.55
MAP1LC3B-206ENST00000564844 PYCARDQ9ULZ3 195 aa24.72■■□□□ 1.55
MAP1LC3B-206ENST00000564844 SPG7Q9UQ90 795 aa24.72■■□□□ 1.55
MAP1LC3B-206ENST00000564844 PTPRMP28827 1452 aa24.71■■□□□ 1.55
MAP1LC3B-206ENST00000564844 CHL1O00533 1208 aa24.71■■□□□ 1.55
MAP1LC3B-206ENST00000564844 PDE4CQ08493 712 aa24.71■■□□□ 1.55
MAP1LC3B-206ENST00000564844 RGS12O14924 1447 aa24.71■■□□□ 1.55
MAP1LC3B-206ENST00000564844 ZFYVE9O95405 1425 aa24.71■■□□□ 1.55
MAP1LC3B-206ENST00000564844 SMAP1Q8IYB5 467 aaPredicted RBP24.71■■□□□ 1.55
MAP1LC3B-206ENST00000564844 ARHGAP31Q2M1Z3 1444 aa24.7■■□□□ 1.55
MAP1LC3B-206ENST00000564844 PHF14O94880 888 aa24.7■■□□□ 1.55
MAP1LC3B-206ENST00000564844 CAMK4Q16566 473 aa24.7■■□□□ 1.55
MAP1LC3B-206ENST00000564844 LRRFIP2Q9Y608 721 aaKnown RBP24.7■■□□□ 1.55
MAP1LC3B-206ENST00000564844 KIF3AQ9Y496 699 aa24.7■■□□□ 1.54
MAP1LC3B-206ENST00000564844 NEXMIFQ5QGS0 1516 aa24.7■■□□□ 1.54
MAP1LC3B-206ENST00000564844 WDR33Q9C0J8 1336 aaKnown RBP24.7■■□□□ 1.54
MAP1LC3B-206ENST00000564844 BCL2L12Q9HB09 334 aa24.7■■□□□ 1.54
MAP1LC3B-206ENST00000564844 FAM173BQ6P4H8 233 aa24.69■■□□□ 1.54
MAP1LC3B-206ENST00000564844 MTERF4Q7Z6M4 381 aaKnown RBP24.69■■□□□ 1.54
MAP1LC3B-206ENST00000564844 MCM2P49736 904 aa24.68■■□□□ 1.54
MAP1LC3B-206ENST00000564844 DNM1Q05193 864 aaKnown RBP24.68■■□□□ 1.54
MAP1LC3B-206ENST00000564844 NUTM2GQ5VZR2 741 aa24.68■■□□□ 1.54
MAP1LC3B-206ENST00000564844 CCDC183Q5T5S1 534 aa24.68■■□□□ 1.54
MAP1LC3B-206ENST00000564844 FERMT3Q86UX7 667 aa24.68■■□□□ 1.54
MAP1LC3B-206ENST00000564844 VPS37CA5D8V6 355 aaPredicted RBP24.67■■□□□ 1.54
MAP1LC3B-206ENST00000564844 ZSCAN20P17040 1043 aaPredicted RBP24.67■■□□□ 1.54
MAP1LC3B-206ENST00000564844 U2AF2P26368 475 aaKnown RBP eCLIP24.67■■□□□ 1.544e-11■■■■□ 26.1
MAP1LC3B-206ENST00000564844 RASEFQ8IZ41 740 aa24.67■■□□□ 1.54
MAP1LC3B-206ENST00000564844 SYT1P21579 422 aa24.67■■□□□ 1.54
MAP1LC3B-206ENST00000564844 CWC27Q6UX04 472 aaKnown RBP24.67■■□□□ 1.54
MAP1LC3B-206ENST00000564844 NUDT16Q96DE0 195 aaKnown RBP24.67■■□□□ 1.54
MAP1LC3B-206ENST00000564844 CCDC83Q8IWF9 413 aa24.67■■□□□ 1.54
MAP1LC3B-206ENST00000564844 LTV1Q96GA3 475 aaPredicted RBP24.67■■□□□ 1.54
MAP1LC3B-206ENST00000564844 ABCA9Q8IUA7 1624 aa24.67■■□□□ 1.54
MAP1LC3B-206ENST00000564844 AK2P54819 239 aa24.66■■□□□ 1.54
MAP1LC3B-206ENST00000564844 AEBP2Q6ZN18 517 aaPredicted RBP24.66■■□□□ 1.54
MAP1LC3B-206ENST00000564844 LARGE1O95461 756 aa24.66■■□□□ 1.54
MAP1LC3B-206ENST00000564844 SLC52A1Q9NWF4 448 aa24.65■■□□□ 1.54
MAP1LC3B-206ENST00000564844 RIOK3O14730 519 aaKnown RBP24.65■■□□□ 1.54
MAP1LC3B-206ENST00000564844 KDM4AO75164 1064 aa24.65■■□□□ 1.54
MAP1LC3B-206ENST00000564844 RTF1Q92541 710 aaKnown RBP24.65■■□□□ 1.54
MAP1LC3B-206ENST00000564844 INTS4Q96HW7 963 aaKnown RBP24.64■■□□□ 1.54
MAP1LC3B-206ENST00000564844 SMC3Q9UQE7 1217 aa24.64■■□□□ 1.54
MAP1LC3B-206ENST00000564844 ARAP3Q8WWN8 1544 aa24.64■■□□□ 1.54
MAP1LC3B-206ENST00000564844 SIGLEC1Q9BZZ2 1709 aa24.64■■□□□ 1.54
MAP1LC3B-206ENST00000564844 STX6O43752 255 aa24.64■■□□□ 1.53
MAP1LC3B-206ENST00000564844 OSBPL3Q9H4L5 887 aa24.64■■□□□ 1.53
MAP1LC3B-206ENST00000564844 LMTK2Q8IWU2 1503 aa24.64■■□□□ 1.53
MAP1LC3B-206ENST00000564844 PTPRCP08575 1304 aa24.63■■□□□ 1.53
MAP1LC3B-206ENST00000564844 SURF6O75683 361 aaKnown RBP24.63■■□□□ 1.53
MAP1LC3B-206ENST00000564844 KCNF1Q9H3M0 494 aa24.63■■□□□ 1.53
MAP1LC3B-206ENST00000564844 ZSCAN22P10073 491 aaPredicted RBP24.63■■□□□ 1.53
MAP1LC3B-206ENST00000564844 STK31Q9BXU1 1019 aa24.63■■□□□ 1.53
MAP1LC3B-206ENST00000564844 NECAB1Q8N987 351 aa24.63■■□□□ 1.53
MAP1LC3B-206ENST00000564844 NAA30Q147X3 362 aaPredicted RBP24.62■■□□□ 1.53
MAP1LC3B-206ENST00000564844 WASLO00401 505 aaPredicted RBP24.62■■□□□ 1.53
MAP1LC3B-206ENST00000564844 CKAP2LQ8IYA6 745 aa24.62■■□□□ 1.53
MAP1LC3B-206ENST00000564844 PDCL2Q8N4E4 241 aa24.62■■□□□ 1.53
MAP1LC3B-206ENST00000564844 CASTP20810 708 aaKnown RBP24.61■■□□□ 1.53
MAP1LC3B-206ENST00000564844 DRC7Q8IY82 874 aa24.61■■□□□ 1.53
MAP1LC3B-206ENST00000564844 RUFY3Q7L099 469 aa24.61■■□□□ 1.53
MAP1LC3B-206ENST00000564844 PRIMPOLQ96LW4 560 aa24.61■■□□□ 1.53
MAP1LC3B-206ENST00000564844 TCEANC2Q96MN5 208 aa24.61■■□□□ 1.53
MAP1LC3B-206ENST00000564844 RPAP1Q9BWH6 1393 aaPredicted RBP24.61■■□□□ 1.53
MAP1LC3B-206ENST00000564844 HMGN5P82970 282 aaKnown RBP24.6■■□□□ 1.53
MAP1LC3B-206ENST00000564844 DLG5Q8TDM6 1919 aa24.6■■□□□ 1.53
MAP1LC3B-206ENST00000564844 PTGS1P23219 599 aa24.6■■□□□ 1.53
MAP1LC3B-206ENST00000564844 CCT4P50991 539 aaKnown RBP24.6■■□□□ 1.53
MAP1LC3B-206ENST00000564844 LRMPQ12912 555 aa24.6■■□□□ 1.53
MAP1LC3B-206ENST00000564844 MTHFSDQ2M296 383 aaKnown RBP24.6■■□□□ 1.53
MAP1LC3B-206ENST00000564844 SNX14Q9Y5W7 946 aa24.6■■□□□ 1.53
MAP1LC3B-206ENST00000564844 FRMPD1Q5SYB0 1578 aa24.6■■□□□ 1.53
MAP1LC3B-206ENST00000564844 FLIIQ13045 1269 aa24.6■■□□□ 1.53
MAP1LC3B-206ENST00000564844 FAM184AQ8NB25 1140 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms