RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 PLEKHF1Q96S99 279 aa9.59□□□□□ -0.87
MAP1LC3B-205ENST00000564638 SHANK3Q9BYB0 1731 aa9.59□□□□□ -0.87
MAP1LC3B-205ENST00000564638 ZBTB22O15209 634 aa9.58□□□□□ -0.88
MAP1LC3B-205ENST00000564638 ACSBG1Q96GR2 724 aa9.58□□□□□ -0.88
MAP1LC3B-205ENST00000564638 PKD1L3Q7Z443 1732 aa9.58□□□□□ -0.88
MAP1LC3B-205ENST00000564638 SBF2Q86WG5 1849 aa9.58□□□□□ -0.88
MAP1LC3B-205ENST00000564638 IL16Q14005 1332 aa9.57□□□□□ -0.88
MAP1LC3B-205ENST00000564638 TRIM37O94972 964 aa9.57□□□□□ -0.88
MAP1LC3B-205ENST00000564638 CT47B1P0C2W7 299 aaPredicted RBP9.57□□□□□ -0.88
MAP1LC3B-205ENST00000564638 CANXP27824 592 aaKnown RBP9.57□□□□□ -0.88
MAP1LC3B-205ENST00000564638 PRKAR2BP31323 418 aa9.57□□□□□ -0.88
MAP1LC3B-205ENST00000564638 SPG7Q9UQ90 795 aa9.57□□□□□ -0.88
MAP1LC3B-205ENST00000564638 PCDH11XQ9BZA7 1347 aa9.56□□□□□ -0.88
MAP1LC3B-205ENST00000564638 PCDH11YQ9BZA8 1340 aa9.56□□□□□ -0.88
MAP1LC3B-205ENST00000564638 KCNQ2O43526 872 aa9.56□□□□□ -0.88
MAP1LC3B-205ENST00000564638 PLEKHO1Q53GL0 409 aaPredicted RBP9.56□□□□□ -0.88
MAP1LC3B-205ENST00000564638 PDGFDQ9GZP0 370 aaPredicted RBP9.56□□□□□ -0.88
MAP1LC3B-205ENST00000564638 RSPH6AQ9H0K4 717 aa9.56□□□□□ -0.88
MAP1LC3B-205ENST00000564638 DOT1LQ8TEK3 1739 aa9.56□□□□□ -0.88
MAP1LC3B-205ENST00000564638 PCNTO95613 3336 aa9.56□□□□□ -0.88
MAP1LC3B-205ENST00000564638 RIPK4P57078 832 aa9.55□□□□□ -0.88
MAP1LC3B-205ENST00000564638 CALD1Q05682 793 aaKnown RBP9.55□□□□□ -0.88
MAP1LC3B-205ENST00000564638 C20orf194Q5TEA3 1177 aa9.55□□□□□ -0.88
MAP1LC3B-205ENST00000564638 ZNF530Q6P9A1 599 aaPredicted RBP9.55□□□□□ -0.88
MAP1LC3B-205ENST00000564638 SYTL4Q96C24 671 aaPredicted RBP9.55□□□□□ -0.88
MAP1LC3B-205ENST00000564638 RBM19Q9Y4C8 960 aaKnown RBP9.55□□□□□ -0.88
MAP1LC3B-205ENST00000564638 FANCIQ9NVI1 1328 aa9.55□□□□□ -0.88
MAP1LC3B-205ENST00000564638 KDRP35968 1356 aa9.54□□□□□ -0.88
MAP1LC3B-205ENST00000564638 CYP27B1O15528 508 aa9.54□□□□□ -0.88
MAP1LC3B-205ENST00000564638 BCAR3O75815 825 aa9.54□□□□□ -0.88
MAP1LC3B-205ENST00000564638 APBA3O96018 575 aa9.54□□□□□ -0.88
MAP1LC3B-205ENST00000564638 LMOD3Q0VAK6 560 aa9.54□□□□□ -0.88
MAP1LC3B-205ENST00000564638 PDE3AQ14432 1141 aa9.54□□□□□ -0.88
MAP1LC3B-205ENST00000564638 NFE2L2Q16236 605 aa9.54□□□□□ -0.88
MAP1LC3B-205ENST00000564638 SPON1Q9HCB6 807 aa9.54□□□□□ -0.88
MAP1LC3B-205ENST00000564638 TRIM35Q9UPQ4 493 aa9.54□□□□□ -0.88
MAP1LC3B-205ENST00000564638 NHSQ6T4R5 1651 aa9.54□□□□□ -0.88
MAP1LC3B-205ENST00000564638 CASZ1Q86V15 1759 aa9.53□□□□□ -0.88
MAP1LC3B-205ENST00000564638 RARSP54136 660 aaKnown RBP9.53□□□□□ -0.88
MAP1LC3B-205ENST00000564638 AMOTQ4VCS5 1084 aa9.53□□□□□ -0.88
MAP1LC3B-205ENST00000564638 C1orf141Q5JVX7 400 aa9.53□□□□□ -0.88
MAP1LC3B-205ENST00000564638 PTF1AQ7RTS3 328 aa9.53□□□□□ -0.88
MAP1LC3B-205ENST00000564638 IFNL2Q8IZJ0 200 aa9.53□□□□□ -0.88
MAP1LC3B-205ENST00000564638 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.53□□□□□ -0.88
MAP1LC3B-205ENST00000564638 BTAF1O14981 1849 aa9.52□□□□□ -0.89
MAP1LC3B-205ENST00000564638 ITGB4P16144 1822 aa9.52□□□□□ -0.89
MAP1LC3B-205ENST00000564638 PHKG2P15735 406 aa9.52□□□□□ -0.89
MAP1LC3B-205ENST00000564638 PTGER2P43116 358 aa9.52□□□□□ -0.89
MAP1LC3B-205ENST00000564638 CENPQQ7L2Z9 268 aaPredicted RBP9.52□□□□□ -0.89
MAP1LC3B-205ENST00000564638 TOGARAM1Q9Y4F4 1720 aa9.52□□□□□ -0.89
MAP1LC3B-205ENST00000564638 CHD4Q14839 1912 aa9.52□□□□□ -0.89
MAP1LC3B-205ENST00000564638 VIRMAQ69YN4 1812 aaKnown RBP9.52□□□□□ -0.89
MAP1LC3B-205ENST00000564638 BCL9O00512 1426 aa9.51□□□□□ -0.89
MAP1LC3B-205ENST00000564638 TCERG1O14776 1098 aaKnown RBP9.51□□□□□ -0.89
MAP1LC3B-205ENST00000564638 MS4A1P11836 297 aa9.51□□□□□ -0.89
MAP1LC3B-205ENST00000564638 PRIM1P49642 420 aaKnown RBP9.51□□□□□ -0.89
MAP1LC3B-205ENST00000564638 AAMPQ13685 434 aa9.51□□□□□ -0.89
MAP1LC3B-205ENST00000564638 FRAT1Q92837 279 aaPredicted RBP9.51□□□□□ -0.89
MAP1LC3B-205ENST00000564638 TSR2Q969E8 191 aaKnown RBP9.51□□□□□ -0.89
MAP1LC3B-205ENST00000564638 BCL11BQ9C0K0 894 aaPredicted RBP9.51□□□□□ -0.89
MAP1LC3B-205ENST00000564638 PLEKHG2Q9H7P9 1386 aa9.5□□□□□ -0.89
MAP1LC3B-205ENST00000564638 HSP90AB1P08238 724 aaKnown RBP9.5□□□□□ -0.89
MAP1LC3B-205ENST00000564638 EXOSC9Q06265 439 aaKnown RBP9.5□□□□□ -0.89
MAP1LC3B-205ENST00000564638 MTHFSDQ2M296 383 aaKnown RBP9.5□□□□□ -0.89
MAP1LC3B-205ENST00000564638 GAS2L2Q8NHY3 880 aa9.5□□□□□ -0.89
MAP1LC3B-205ENST00000564638 PPP1R1BQ9UD71 204 aaPredicted RBP9.5□□□□□ -0.89
MAP1LC3B-205ENST00000564638 KDM2BQ8NHM5 1336 aa9.5□□□□□ -0.89
MAP1LC3B-205ENST00000564638 GNAI1P63096 354 aa9.49□□□□□ -0.89
MAP1LC3B-205ENST00000564638 AKAP4Q5JQC9 854 aa9.49□□□□□ -0.89
MAP1LC3B-205ENST00000564638 ZKSCAN2Q63HK3 967 aa9.49□□□□□ -0.89
MAP1LC3B-205ENST00000564638 MPRIPQ6WCQ1 1025 aa9.49□□□□□ -0.89
MAP1LC3B-205ENST00000564638 PHACTR3Q96KR7 559 aa9.49□□□□□ -0.89
MAP1LC3B-205ENST00000564638 ANO8Q9HCE9 1232 aaPredicted RBP9.49□□□□□ -0.89
MAP1LC3B-205ENST00000564638 SMC4Q9NTJ3 1288 aa9.49□□□□□ -0.89
MAP1LC3B-205ENST00000564638 IFT57Q9NWB7 429 aa9.49□□□□□ -0.89
MAP1LC3B-205ENST00000564638 SCN11AQ9UI33 1791 aa9.49□□□□□ -0.89
MAP1LC3B-205ENST00000564638 KIF16BQ96L93 1317 aa9.49□□□□□ -0.89
MAP1LC3B-205ENST00000564638 NKX1-1Q15270 411 aaPredicted RBP9.48□□□□□ -0.89
MAP1LC3B-205ENST00000564638 ZNF428Q96B54 188 aa9.48□□□□□ -0.89
MAP1LC3B-205ENST00000564638 DCAF5Q96JK2 942 aa9.48□□□□□ -0.89
MAP1LC3B-205ENST00000564638 SYT17Q9BSW7 474 aa9.48□□□□□ -0.89
MAP1LC3B-205ENST00000564638 BCL2L13Q9BXK5 485 aa9.48□□□□□ -0.89
MAP1LC3B-205ENST00000564638 TMOD3Q9NYL9 352 aa9.48□□□□□ -0.89
MAP1LC3B-205ENST00000564638 MAP3K5Q99683 1374 aa9.48□□□□□ -0.89
MAP1LC3B-205ENST00000564638 KDM6AO15550 1401 aaPredicted RBP9.48□□□□□ -0.89
MAP1LC3B-205ENST00000564638 RNMTO43148 476 aaKnown RBP9.47□□□□□ -0.89
MAP1LC3B-205ENST00000564638 CABP4P57796 275 aa9.47□□□□□ -0.89
MAP1LC3B-205ENST00000564638 ALDH1L2Q3SY69 923 aa9.47□□□□□ -0.89
MAP1LC3B-205ENST00000564638 FTSJ3Q8IY81 847 aaKnown RBP9.47□□□□□ -0.89
MAP1LC3B-205ENST00000564638 PANK1Q8TE04 598 aa9.47□□□□□ -0.89
MAP1LC3B-205ENST00000564638 CLUAP1Q96AJ1 413 aa9.47□□□□□ -0.89
MAP1LC3B-205ENST00000564638 SGIP1Q9BQI5 828 aa9.47□□□□□ -0.89
MAP1LC3B-205ENST00000564638 COG6Q9Y2V7 657 aa9.47□□□□□ -0.89
MAP1LC3B-205ENST00000564638 RGPD3A6NKT7 1758 aaPredicted RBP9.46□□□□□ -0.9
MAP1LC3B-205ENST00000564638 RGPD4Q7Z3J3 1758 aa9.46□□□□□ -0.9
MAP1LC3B-205ENST00000564638 DCAF8L1A6NGE4 600 aa9.46□□□□□ -0.9
MAP1LC3B-205ENST00000564638 GNAT3A8MTJ3 354 aa9.46□□□□□ -0.9
MAP1LC3B-205ENST00000564638 IPO8O15397 1037 aaKnown RBP9.46□□□□□ -0.9
MAP1LC3B-205ENST00000564638 PIGBQ92521 554 aa9.46□□□□□ -0.9
MAP1LC3B-205ENST00000564638 RTF1Q92541 710 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms