RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 WNT7AO00755 349 aa9.91□□□□□ -0.82
HERPUD1-208ENST00000563911 FAM200AQ8TCP9 573 aa9.91□□□□□ -0.82
HERPUD1-208ENST00000563911 ZNF594Q96JF6 807 aaPredicted RBP9.91□□□□□ -0.82
HERPUD1-208ENST00000563911 ESF1Q9H501 851 aaKnown RBP9.91□□□□□ -0.82
HERPUD1-208ENST00000563911 DNAAF2Q9NVR5 837 aaKnown RBP9.91□□□□□ -0.82
HERPUD1-208ENST00000563911 ZMIZ1Q9ULJ6 1067 aa9.91□□□□□ -0.82
HERPUD1-208ENST00000563911 TMEM88BA6NKF7 163 aa9.9□□□□□ -0.82
HERPUD1-208ENST00000563911 ERVH48-1M5A8F1 160 aa9.9□□□□□ -0.82
HERPUD1-208ENST00000563911 SIAH2O43255 324 aa9.9□□□□□ -0.82
HERPUD1-208ENST00000563911 MYCP01106 439 aaPredicted RBP9.9□□□□□ -0.82
HERPUD1-208ENST00000563911 FSHRP23945 695 aa9.9□□□□□ -0.82
HERPUD1-208ENST00000563911 GTF2IP78347 998 aa9.9□□□□□ -0.82
HERPUD1-208ENST00000563911 CLDN10P78369 228 aa9.9□□□□□ -0.82
HERPUD1-208ENST00000563911 SPRYD7Q5W111 196 aa9.9□□□□□ -0.82
HERPUD1-208ENST00000563911 STK32AQ8WU08 396 aa9.9□□□□□ -0.82
HERPUD1-208ENST00000563911 MRGPRX2Q96LB1 330 aa9.9□□□□□ -0.82
HERPUD1-208ENST00000563911 GRM5P41594 1212 aa9.89□□□□□ -0.83
HERPUD1-208ENST00000563911 PSME1Q06323 249 aa9.89□□□□□ -0.83
HERPUD1-208ENST00000563911 TMEM164Q5U3C3 297 aa9.89□□□□□ -0.83
HERPUD1-208ENST00000563911 ANKMY2Q8IV38 441 aa9.89□□□□□ -0.83
HERPUD1-208ENST00000563911 LARGE2Q8N3Y3 721 aa9.89□□□□□ -0.83
HERPUD1-208ENST00000563911 MPNDQ8N594 471 aa9.89□□□□□ -0.83
HERPUD1-208ENST00000563911 RBM19Q9Y4C8 960 aaKnown RBP9.89□□□□□ -0.83
HERPUD1-208ENST00000563911 TEX14Q8IWB6 1497 aa9.89□□□□□ -0.83
HERPUD1-208ENST00000563911 UGGT2Q9NYU1 1516 aa9.88□□□□□ -0.83
HERPUD1-208ENST00000563911 WDR7Q9Y4E6 1490 aa9.88□□□□□ -0.83
HERPUD1-208ENST00000563911 A0A0G2JS52 829 aa9.88□□□□□ -0.83
HERPUD1-208ENST00000563911 DHX9Q08211 1270 aaKnown RBP9.88□□□□□ -0.83
HERPUD1-208ENST00000563911 DPYDQ12882 1025 aa9.88□□□□□ -0.83
HERPUD1-208ENST00000563911 ZNF697Q5TEC3 545 aa9.88□□□□□ -0.83
HERPUD1-208ENST00000563911 PODXL2Q9NZ53 605 aa9.88□□□□□ -0.83
HERPUD1-208ENST00000563911 CD109Q6YHK3 1445 aa9.88□□□□□ -0.83
HERPUD1-208ENST00000563911 KIF21BO75037 1637 aa9.87□□□□□ -0.83
HERPUD1-208ENST00000563911 ADH1CP00326 375 aa9.87□□□□□ -0.83
HERPUD1-208ENST00000563911 FOXC1Q12948 553 aa9.87□□□□□ -0.83
HERPUD1-208ENST00000563911 ZNF598Q86UK7 904 aaKnown RBP9.87□□□□□ -0.83
HERPUD1-208ENST00000563911 TRIM52Q96A61 297 aa9.87□□□□□ -0.83
HERPUD1-208ENST00000563911 MAGI3Q5TCQ9 1506 aa9.87□□□□□ -0.83
HERPUD1-208ENST00000563911 ZBTB7BO15156 539 aaPredicted RBP9.86□□□□□ -0.83
HERPUD1-208ENST00000563911 BRD1O95696 1058 aa9.86□□□□□ -0.83
HERPUD1-208ENST00000563911 SCTRP47872 440 aa9.86□□□□□ -0.83
HERPUD1-208ENST00000563911 NR5A1Q13285 461 aa9.86□□□□□ -0.83
HERPUD1-208ENST00000563911 CCDC102BQ68D86 513 aa9.86□□□□□ -0.83
HERPUD1-208ENST00000563911 PRKD2Q9BZL6 878 aa9.86□□□□□ -0.83
HERPUD1-208ENST00000563911 TMPRSS4Q9NRS4 437 aa9.86□□□□□ -0.83
HERPUD1-208ENST00000563911 KIAA1024Q9UPX6 916 aa9.86□□□□□ -0.83
HERPUD1-208ENST00000563911 PCDHGA11Q9Y5H2 935 aa9.86□□□□□ -0.83
HERPUD1-208ENST00000563911 KIAA0556O60303 1618 aa9.85□□□□□ -0.83
HERPUD1-208ENST00000563911 CCDC116Q8IYX3 515 aa9.85□□□□□ -0.83
HERPUD1-208ENST00000563911 TPCN2Q8NHX9 752 aa9.85□□□□□ -0.83
HERPUD1-208ENST00000563911 PTPRMP28827 1452 aa9.85□□□□□ -0.83
HERPUD1-208ENST00000563911 ALDH1A1P00352 501 aa9.84□□□□□ -0.83
HERPUD1-208ENST00000563911 CC2D2BQ6DHV5 1058 aa9.84□□□□□ -0.83
HERPUD1-208ENST00000563911 SIX5Q8N196 739 aa9.84□□□□□ -0.83
HERPUD1-208ENST00000563911 CYLDQ9NQC7 956 aa9.84□□□□□ -0.83
HERPUD1-208ENST00000563911 RAPGEF3O95398 923 aa9.83□□□□□ -0.84
HERPUD1-208ENST00000563911 SEC13P55735 322 aa9.83□□□□□ -0.84
HERPUD1-208ENST00000563911 ERVK-9P63128 1117 aa9.83□□□□□ -0.84
HERPUD1-208ENST00000563911 PPP1R26Q5T8A7 1209 aaPredicted RBP9.83□□□□□ -0.84
HERPUD1-208ENST00000563911 V9GY48 417 aaPredicted RBP9.83□□□□□ -0.84
HERPUD1-208ENST00000563911 ADAMTSL3P82987 1691 aa9.83□□□□□ -0.84
HERPUD1-208ENST00000563911 ILDR2Q71H61 639 aa9.82□□□□□ -0.84
HERPUD1-208ENST00000563911 ZNF784Q8NCA9 323 aaPredicted RBP9.82□□□□□ -0.84
HERPUD1-208ENST00000563911 WASF2Q9Y6W5 498 aa9.82□□□□□ -0.84
HERPUD1-208ENST00000563911 ABCA8O94911 1581 aa9.82□□□□□ -0.84
HERPUD1-208ENST00000563911 ARAP3Q8WWN8 1544 aa9.82□□□□□ -0.84
HERPUD1-208ENST00000563911 RAPGEF2Q9Y4G8 1499 aa9.81□□□□□ -0.84
HERPUD1-208ENST00000563911 SFI1A8K8P3 1242 aa9.81□□□□□ -0.84
HERPUD1-208ENST00000563911 PATL2C9JE40 543 aaKnown RBP9.81□□□□□ -0.84
HERPUD1-208ENST00000563911 DKK1O94907 266 aa9.81□□□□□ -0.84
HERPUD1-208ENST00000563911 NR3C2P08235 984 aa9.81□□□□□ -0.84
HERPUD1-208ENST00000563911 MYT1Q01538 1121 aa9.81□□□□□ -0.84
HERPUD1-208ENST00000563911 B4GALNT3Q6L9W6 998 aa9.81□□□□□ -0.84
HERPUD1-208ENST00000563911 PKD2L1Q9P0L9 805 aa9.81□□□□□ -0.84
HERPUD1-208ENST00000563911 LMTK3Q96Q04 1460 aa9.8□□□□□ -0.84
HERPUD1-208ENST00000563911 HSPA2P54652 639 aa9.8□□□□□ -0.84
HERPUD1-208ENST00000563911 KCNA1Q09470 495 aa9.8□□□□□ -0.84
HERPUD1-208ENST00000563911 SNIP1Q8TAD8 396 aaKnown RBP9.8□□□□□ -0.84
HERPUD1-208ENST00000563911 PGPEP1Q9NXJ5 209 aa9.8□□□□□ -0.84
HERPUD1-208ENST00000563911 EMILIN1Q9Y6C2 1016 aa9.8□□□□□ -0.84
HERPUD1-208ENST00000563911 CFAP43Q8NDM7 1665 aa9.8□□□□□ -0.84
HERPUD1-208ENST00000563911 TTC24A2A3L6 582 aaPredicted RBP9.79□□□□□ -0.84
HERPUD1-208ENST00000563911 NNTQ13423 1086 aa9.79□□□□□ -0.84
HERPUD1-208ENST00000563911 SWI5Q1ZZU3 235 aa9.79□□□□□ -0.84
HERPUD1-208ENST00000563911 HINFPQ9BQA5 517 aa9.79□□□□□ -0.84
HERPUD1-208ENST00000563911 OSBPL3Q9H4L5 887 aa9.79□□□□□ -0.84
HERPUD1-208ENST00000563911 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.78□□□□□ -0.84
HERPUD1-208ENST00000563911 CLP1Q92989 425 aaKnown RBP9.78□□□□□ -0.84
HERPUD1-208ENST00000563911 ATP10BO94823 1461 aa9.78□□□□□ -0.84
HERPUD1-208ENST00000563911 LILRA1O75019 489 aa9.77□□□□□ -0.85
HERPUD1-208ENST00000563911 CYP4X1Q8N118 509 aa9.77□□□□□ -0.85
HERPUD1-208ENST00000563911 MADDQ8WXG6 1647 aa9.76□□□□□ -0.85
HERPUD1-208ENST00000563911 TNFRSF10AO00220 468 aa9.76□□□□□ -0.85
HERPUD1-208ENST00000563911 ADD1P35611 737 aaKnown RBP9.76□□□□□ -0.85
HERPUD1-208ENST00000563911 CYP2U1Q7Z449 544 aa9.76□□□□□ -0.85
HERPUD1-208ENST00000563911 GZF1Q9H116 711 aaPredicted RBP9.76□□□□□ -0.85
HERPUD1-208ENST00000563911 SLAIN2Q9P270 581 aa9.76□□□□□ -0.85
HERPUD1-208ENST00000563911 PCF11O94913 1555 aaKnown RBP9.75□□□□□ -0.85
HERPUD1-208ENST00000563911 FRMPD1Q5SYB0 1578 aa9.75□□□□□ -0.85
HERPUD1-208ENST00000563911 J3QL48 77 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms