RNA–Protein interactions for RNA: ENST00000563705.5

SPSB3-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 876 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-203ENST00000563705 UBR3Q6ZT12 1888 aa28.67■■■□□ 2.18
SPSB3-203ENST00000563705 MSH5O43196 834 aa28.65■■■□□ 2.18
SPSB3-203ENST00000563705 SCN11AQ9UI33 1791 aa28.63■■■□□ 2.17
SPSB3-203ENST00000563705 CABP4P57796 275 aa28.62■■■□□ 2.17
SPSB3-203ENST00000563705 LINC00116Q8NCU8 138 aa28.62■■■□□ 2.17
SPSB3-203ENST00000563705 ATP6V1AP38606 617 aa28.61■■■□□ 2.17
SPSB3-203ENST00000563705 ITPK1Q13572 414 aa28.61■■■□□ 2.17
SPSB3-203ENST00000563705 AKAP4Q5JQC9 854 aa28.61■■■□□ 2.17
SPSB3-203ENST00000563705 HMOX1P09601 288 aa28.6■■■□□ 2.17
SPSB3-203ENST00000563705 SSFA2P28290 1259 aa28.59■■■□□ 2.17
SPSB3-203ENST00000563705 CNGB1Q14028 1251 aaPredicted RBP28.59■■■□□ 2.17
SPSB3-203ENST00000563705 COL5A3P25940 1745 aaPredicted RBP28.57■■■□□ 2.16
SPSB3-203ENST00000563705 MRC1P22897 1456 aa28.57■■■□□ 2.16
SPSB3-203ENST00000563705 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.56■■■□□ 2.16
SPSB3-203ENST00000563705 AMIGO3Q86WK7 504 aa28.56■■■□□ 2.16
SPSB3-203ENST00000563705 ADAMTS7Q9UKP4 1686 aa28.55■■■□□ 2.16
SPSB3-203ENST00000563705 CICQ96RK0 1608 aaPredicted RBP28.55■■■□□ 2.16
SPSB3-203ENST00000563705 RBM42Q9BTD8 480 aaKnown RBP28.55■■■□□ 2.16
SPSB3-203ENST00000563705 GNPATO15228 680 aa28.54■■■□□ 2.16
SPSB3-203ENST00000563705 PHF14O94880 888 aa28.54■■■□□ 2.16
SPSB3-203ENST00000563705 MSL1Q68DK7 614 aa28.54■■■□□ 2.16
SPSB3-203ENST00000563705 NFATC2IPQ8NCF5 419 aa28.54■■■□□ 2.16
SPSB3-203ENST00000563705 SLC4A9Q96Q91 983 aa28.54■■■□□ 2.16
SPSB3-203ENST00000563705 VIRMAQ69YN4 1812 aaKnown RBP28.53■■■□□ 2.16
SPSB3-203ENST00000563705 CFAP53Q96M91 514 aa28.52■■■□□ 2.16
SPSB3-203ENST00000563705 CNTNAP4Q9C0A0 1308 aa28.51■■■□□ 2.15
SPSB3-203ENST00000563705 U2SURPO15042 1029 aaKnown RBP28.51■■■□□ 2.15
SPSB3-203ENST00000563705 MTHFSDQ2M296 383 aaKnown RBP28.51■■■□□ 2.15
SPSB3-203ENST00000563705 KLHL34Q8N239 644 aa28.51■■■□□ 2.15
SPSB3-203ENST00000563705 RC3H1Q5TC82 1133 aaKnown RBP28.5■■■□□ 2.15
SPSB3-203ENST00000563705 SLC52A2Q9HAB3 445 aa28.5■■■□□ 2.15
SPSB3-203ENST00000563705 RNMTO43148 476 aaKnown RBP28.49■■■□□ 2.15
SPSB3-203ENST00000563705 YY1P25490 414 aa28.49■■■□□ 2.15
SPSB3-203ENST00000563705 SMIM5Q71RC9 77 aa28.48■■■□□ 2.15
SPSB3-203ENST00000563705 LGR6Q9HBX8 967 aa28.48■■■□□ 2.15
SPSB3-203ENST00000563705 TJP1Q07157 1748 aa28.48■■■□□ 2.15
SPSB3-203ENST00000563705 PPP2R1AP30153 589 aa28.47■■■□□ 2.15
SPSB3-203ENST00000563705 RTCBQ9Y3I0 505 aaKnown RBP28.47■■■□□ 2.15
SPSB3-203ENST00000563705 PTCD1O75127 700 aaKnown RBP28.46■■■□□ 2.15
SPSB3-203ENST00000563705 UTRNP46939 3433 aa28.46■■■□□ 2.15
SPSB3-203ENST00000563705 ADRA2BP18089 450 aa28.45■■■□□ 2.14
SPSB3-203ENST00000563705 GAS2L2Q8NHY3 880 aa28.45■■■□□ 2.14
SPSB3-203ENST00000563705 NLGN2Q8NFZ4 835 aa28.44■■■□□ 2.14
SPSB3-203ENST00000563705 NUDCQ9Y266 331 aa28.44■■■□□ 2.14
SPSB3-203ENST00000563705 MYH14Q7Z406 1995 aaKnown RBP28.44■■■□□ 2.14
SPSB3-203ENST00000563705 CD2APQ9Y5K6 639 aa28.43■■■□□ 2.14
SPSB3-203ENST00000563705 RPS6KA4O75676 772 aa28.42■■■□□ 2.14
SPSB3-203ENST00000563705 TRAPPC3LQ5T215 181 aa28.42■■■□□ 2.14
SPSB3-203ENST00000563705 KCPQ6ZWJ8 1503 aa28.41■■■□□ 2.14
SPSB3-203ENST00000563705 C4AP0C0L4 1744 aa28.4■■■□□ 2.14
SPSB3-203ENST00000563705 CHD4Q14839 1912 aa28.4■■■□□ 2.14
SPSB3-203ENST00000563705 GPR162Q16538 588 aa28.4■■■□□ 2.14
SPSB3-203ENST00000563705 RSPH6AQ9H0K4 717 aa28.4■■■□□ 2.14
SPSB3-203ENST00000563705 CRKLP46109 303 aaKnown RBP28.39■■■□□ 2.14
SPSB3-203ENST00000563705 UBR2Q8IWV8 1755 aa28.39■■■□□ 2.13
SPSB3-203ENST00000563705 GNAT3A8MTJ3 354 aa28.38■■■□□ 2.13
SPSB3-203ENST00000563705 PRKAR2BP31323 418 aa28.37■■■□□ 2.13
SPSB3-203ENST00000563705 ARHGEF1Q92888 912 aaKnown RBP28.37■■■□□ 2.13
SPSB3-203ENST00000563705 GOLGB1Q14789 3259 aaKnown RBP28.36■■■□□ 2.13
SPSB3-203ENST00000563705 SLC39A6Q13433 755 aa28.36■■■□□ 2.13
SPSB3-203ENST00000563705 SIPA1L3O60292 1781 aaPredicted RBP28.36■■■□□ 2.13
SPSB3-203ENST00000563705 U2AF1L5P0DN76 240 aaPredicted RBP28.35■■■□□ 2.13
SPSB3-203ENST00000563705 RFC4P35249 363 aa28.35■■■□□ 2.13
SPSB3-203ENST00000563705 U2AF1Q01081 240 aaKnown RBP eCLIP28.35■■■□□ 2.13
SPSB3-203ENST00000563705 NLGN1Q8N2Q7 840 aa28.35■■■□□ 2.13
SPSB3-203ENST00000563705 MMP10P09238 476 aa28.33■■■□□ 2.13
SPSB3-203ENST00000563705 TEFQ10587 303 aa28.33■■■□□ 2.13
SPSB3-203ENST00000563705 DNAJC10Q8IXB1 793 aa28.33■■■□□ 2.13
SPSB3-203ENST00000563705 PELP1Q8IZL8 1130 aaKnown RBP28.33■■■□□ 2.13
SPSB3-203ENST00000563705 VSIG10Q8N0Z9 540 aa28.33■■■□□ 2.13
SPSB3-203ENST00000563705 IL17REQ8NFR9 667 aa28.33■■■□□ 2.13
SPSB3-203ENST00000563705 PHACTR3Q96KR7 559 aa28.33■■■□□ 2.13
SPSB3-203ENST00000563705 CEMIPQ8WUJ3 1361 aa28.33■■■□□ 2.13
SPSB3-203ENST00000563705 FCHSD2O94868 740 aa28.32■■■□□ 2.12
SPSB3-203ENST00000563705 GYS1P13807 737 aa28.31■■■□□ 2.12
SPSB3-203ENST00000563705 INTS5Q6P9B9 1019 aaKnown RBP28.31■■■□□ 2.12
SPSB3-203ENST00000563705 CCDC87Q9NVE4 849 aa28.31■■■□□ 2.12
SPSB3-203ENST00000563705 KIF13BQ9NQT8 1826 aa28.3■■■□□ 2.12
SPSB3-203ENST00000563705 TTC5Q8N0Z6 440 aa28.3■■■□□ 2.12
SPSB3-203ENST00000563705 CYP19A1P11511 503 aaPredicted RBP28.29■■■□□ 2.12
SPSB3-203ENST00000563705 USP42Q9H9J4 1324 aaKnown RBP28.28■■■□□ 2.12
SPSB3-203ENST00000563705 GRIN3BO60391 1043 aa28.28■■■□□ 2.12
SPSB3-203ENST00000563705 YBX3P16989 372 aaKnown RBP eCLIP28.28■■■□□ 2.12
SPSB3-203ENST00000563705 SOS1Q07889 1333 aaPredicted RBP28.27■■■□□ 2.12
SPSB3-203ENST00000563705 ZNF790Q6PG37 636 aa28.26■■■□□ 2.11
SPSB3-203ENST00000563705 C10orf71Q711Q0 1435 aa28.26■■■□□ 2.11
SPSB3-203ENST00000563705 SRP68Q9UHB9 627 aaKnown RBP28.23■■■□□ 2.11
SPSB3-203ENST00000563705 HEG1Q9ULI3 1381 aa28.23■■■□□ 2.11
SPSB3-203ENST00000563705 RTF1Q92541 710 aaKnown RBP28.22■■■□□ 2.11
SPSB3-203ENST00000563705 ZNF496Q96IT1 587 aaPredicted RBP28.22■■■□□ 2.11
SPSB3-203ENST00000563705 KIAA1551Q9HCM1 1747 aa28.22■■■□□ 2.11
SPSB3-203ENST00000563705 ZBTB1Q9Y2K1 713 aa28.22■■■□□ 2.11
SPSB3-203ENST00000563705 PARP3Q9Y6F1 533 aa28.22■■■□□ 2.11
SPSB3-203ENST00000563705 COL15A1P39059 1388 aa28.22■■■□□ 2.11
SPSB3-203ENST00000563705 STARD3NLO95772 234 aa28.21■■■□□ 2.11
SPSB3-203ENST00000563705 RALBP1Q15311 655 aa28.21■■■□□ 2.11
SPSB3-203ENST00000563705 PXDNLA1KZ92 1463 aa28.21■■■□□ 2.11
SPSB3-203ENST00000563705 HTATSF1O43719 755 aaKnown RBP28.2■■■□□ 2.1
SPSB3-203ENST00000563705 ZNF784Q8NCA9 323 aaPredicted RBP28.2■■■□□ 2.1
SPSB3-203ENST00000563705 TEX13AQ9BXU3 409 aaPredicted RBP28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms