RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 ATF3P18847 181 aa24.33■■□□□ 1.49
CDH5-204ENST00000563425 SIPA1L3O60292 1781 aaPredicted RBP24.33■■□□□ 1.48
CDH5-204ENST00000563425 OVOS2A0A0G2JMS6 1433 aa24.32■■□□□ 1.48
CDH5-204ENST00000563425 FKBP5Q13451 457 aaPredicted RBP24.32■■□□□ 1.48
CDH5-204ENST00000563425 NECTIN2Q92692 538 aa24.32■■□□□ 1.48
CDH5-204ENST00000563425 PLEKHG5O94827 1062 aa24.31■■□□□ 1.48
CDH5-204ENST00000563425 PLEKHM2Q8IWE5 1019 aa24.31■■□□□ 1.48
CDH5-204ENST00000563425 CRYBG1Q9Y4K1 1723 aa24.31■■□□□ 1.48
CDH5-204ENST00000563425 PXDNQ92626 1479 aa24.31■■□□□ 1.48
CDH5-204ENST00000563425 AXIN2Q9Y2T1 843 aa24.31■■□□□ 1.48
CDH5-204ENST00000563425 EIF4A1P60842 406 aaKnown RBP24.3■■□□□ 1.48
CDH5-204ENST00000563425 HDGFL1Q5TGJ6 251 aa24.3■■□□□ 1.48
CDH5-204ENST00000563425 ADAMTS7Q9UKP4 1686 aa24.3■■□□□ 1.48
CDH5-204ENST00000563425 HMMRO75330 724 aa24.29■■□□□ 1.48
CDH5-204ENST00000563425 HOXB7P09629 217 aa24.29■■□□□ 1.48
CDH5-204ENST00000563425 TBC1D2Q9BYX2 928 aa24.29■■□□□ 1.48
CDH5-204ENST00000563425 LMTK3Q96Q04 1460 aa24.29■■□□□ 1.48
CDH5-204ENST00000563425 COL18A1P39060 1754 aa24.28■■□□□ 1.48
CDH5-204ENST00000563425 GNAI2P04899 355 aa24.28■■□□□ 1.48
CDH5-204ENST00000563425 NFKBIBQ15653 356 aa24.28■■□□□ 1.48
CDH5-204ENST00000563425 XIRP1Q702N8 1843 aaKnown RBP24.27■■□□□ 1.48
CDH5-204ENST00000563425 RBM25P49756 843 aaKnown RBP24.27■■□□□ 1.48
CDH5-204ENST00000563425 TEFQ10587 303 aa24.27■■□□□ 1.48
CDH5-204ENST00000563425 GNAI3P08754 354 aa24.27■■□□□ 1.48
CDH5-204ENST00000563425 RNMTO43148 476 aaKnown RBP24.26■■□□□ 1.47
CDH5-204ENST00000563425 DEKP35659 375 aaKnown RBP24.26■■□□□ 1.47
CDH5-204ENST00000563425 C1orf141Q5JVX7 400 aa24.26■■□□□ 1.47
CDH5-204ENST00000563425 MPRIPQ6WCQ1 1025 aa24.26■■□□□ 1.47
CDH5-204ENST00000563425 TBC1D9Q6ZT07 1266 aa24.26■■□□□ 1.47
CDH5-204ENST00000563425 CHMP4AQ9BY43 222 aa24.26■■□□□ 1.47
CDH5-204ENST00000563425 ERBB3P21860 1342 aa24.26■■□□□ 1.47
CDH5-204ENST00000563425 GSPT1P15170 499 aaKnown RBP24.25■■□□□ 1.47
CDH5-204ENST00000563425 TTC22Q5TAA0 569 aa24.25■■□□□ 1.47
CDH5-204ENST00000563425 BTBD11A6QL63 1104 aa24.24■■□□□ 1.47
CDH5-204ENST00000563425 C16orf71Q8IYS4 520 aaPredicted RBP24.24■■□□□ 1.47
CDH5-204ENST00000563425 CDC45O75419 566 aa24.23■■□□□ 1.47
CDH5-204ENST00000563425 SCN11AQ9UI33 1791 aa24.23■■□□□ 1.47
CDH5-204ENST00000563425 KCNQ3O43525 872 aa24.23■■□□□ 1.47
CDH5-204ENST00000563425 ZC3H6P61129 1189 aaKnown RBP24.23■■□□□ 1.47
CDH5-204ENST00000563425 CADPS2Q86UW7 1296 aa24.23■■□□□ 1.47
CDH5-204ENST00000563425 PHAXQ9H814 394 aaKnown RBP24.22■■□□□ 1.47
CDH5-204ENST00000563425 NPHP3Q7Z494 1330 aa24.21■■□□□ 1.47
CDH5-204ENST00000563425 ABCC6O95255 1503 aa24.21■■□□□ 1.47
CDH5-204ENST00000563425 SMARCA5O60264 1052 aaPredicted RBP24.21■■□□□ 1.47
CDH5-204ENST00000563425 EIF2S2P20042 333 aaKnown RBP24.21■■□□□ 1.47
CDH5-204ENST00000563425 DDX17Q92841 729 aaKnown RBP24.21■■□□□ 1.47
CDH5-204ENST00000563425 ANTXR1Q9H6X2 564 aa24.21■■□□□ 1.47
CDH5-204ENST00000563425 TNS3Q68CZ2 1445 aa24.2■■□□□ 1.46
CDH5-204ENST00000563425 OTUD7AQ8TE49 926 aaPredicted RBP24.2■■□□□ 1.46
CDH5-204ENST00000563425 TUBGCP6Q96RT7 1819 aa24.2■■□□□ 1.46
CDH5-204ENST00000563425 USP44Q9H0E7 712 aa24.2■■□□□ 1.46
CDH5-204ENST00000563425 APBB1O00213 710 aa24.19■■□□□ 1.46
CDH5-204ENST00000563425 ATP8B2P98198 1209 aa24.19■■□□□ 1.46
CDH5-204ENST00000563425 CHPF2Q9P2E5 772 aa24.19■■□□□ 1.46
CDH5-204ENST00000563425 HEG1Q9ULI3 1381 aa24.19■■□□□ 1.46
CDH5-204ENST00000563425 EIF5BO60841 1220 aaKnown RBP24.18■■□□□ 1.46
CDH5-204ENST00000563425 SLKQ9H2G2 1235 aaPredicted RBP24.18■■□□□ 1.46
CDH5-204ENST00000563425 HSPA2P54652 639 aa24.17■■□□□ 1.46
CDH5-204ENST00000563425 LRRFIP2Q9Y608 721 aaKnown RBP24.16■■□□□ 1.46
CDH5-204ENST00000563425 STRCQ7RTU9 1775 aa24.15■■□□□ 1.46
CDH5-204ENST00000563425 PNMA6EA0A0J9YXQ4 647 aa24.15■■□□□ 1.46
CDH5-204ENST00000563425 UBTFL1P0CB47 393 aaPredicted RBP24.15■■□□□ 1.46
CDH5-204ENST00000563425 SRCIN1Q9C0H9 1055 aa24.15■■□□□ 1.46
CDH5-204ENST00000563425 BCL11AQ9H165 835 aa24.15■■□□□ 1.46
CDH5-204ENST00000563425 OSBPL3Q9H4L5 887 aa24.15■■□□□ 1.46
CDH5-204ENST00000563425 RAPGEF4Q8WZA2 1011 aa24.14■■□□□ 1.46
CDH5-204ENST00000563425 SNX21Q969T3 373 aa24.14■■□□□ 1.46
CDH5-204ENST00000563425 EXOC6BQ9Y2D4 811 aa24.14■■□□□ 1.46
CDH5-204ENST00000563425 SPATA31A3Q5VYP0 1347 aa24.14■■□□□ 1.45
CDH5-204ENST00000563425 GIGYF1O75420 1035 aaPredicted RBP24.14■■□□□ 1.45
CDH5-204ENST00000563425 FRAT2O75474 233 aaPredicted RBP24.14■■□□□ 1.45
CDH5-204ENST00000563425 KIF2CQ99661 725 aa24.14■■□□□ 1.45
CDH5-204ENST00000563425 NLRP2Q9NX02 1062 aa24.14■■□□□ 1.45
CDH5-204ENST00000563425 PKD1L3Q7Z443 1732 aa24.13■■□□□ 1.45
CDH5-204ENST00000563425 HSCBQ8IWL3 235 aa24.13■■□□□ 1.45
CDH5-204ENST00000563425 DBF4Q9UBU7 674 aaPredicted RBP24.13■■□□□ 1.45
CDH5-204ENST00000563425 PLEKHG2Q9H7P9 1386 aa24.12■■□□□ 1.45
CDH5-204ENST00000563425 IBTKQ9P2D0 1353 aaPredicted RBP24.12■■□□□ 1.45
CDH5-204ENST00000563425 SDSP20132 328 aa24.12■■□□□ 1.45
CDH5-204ENST00000563425 DNAAF4Q8WXU2 420 aa24.12■■□□□ 1.45
CDH5-204ENST00000563425 LRRCC1Q9C099 1032 aa24.12■■□□□ 1.45
CDH5-204ENST00000563425 ADCY9O60503 1353 aa24.11■■□□□ 1.45
CDH5-204ENST00000563425 MEGF6O75095 1541 aa24.11■■□□□ 1.45
CDH5-204ENST00000563425 BEND3Q5T5X7 828 aa24.11■■□□□ 1.45
CDH5-204ENST00000563425 CABLES1Q8TDN4 633 aa24.11■■□□□ 1.45
CDH5-204ENST00000563425 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.11■■□□□ 1.45
CDH5-204ENST00000563425 SALL3Q9BXA9 1300 aa24.1■■□□□ 1.45
CDH5-204ENST00000563425 PI4KAP2A4QPH2 592 aa24.1■■□□□ 1.45
CDH5-204ENST00000563425 TATP17735 454 aaPredicted RBP24.1■■□□□ 1.45
CDH5-204ENST00000563425 PDE1AP54750 535 aa24.1■■□□□ 1.45
CDH5-204ENST00000563425 PI4KAP1Q8N8J0 262 aa24.1■■□□□ 1.45
CDH5-204ENST00000563425 KDM6AO15550 1401 aaPredicted RBP24.1■■□□□ 1.45
CDH5-204ENST00000563425 CPDO75976 1380 aa24.1■■□□□ 1.45
CDH5-204ENST00000563425 C5P01031 1676 aa24.1■■□□□ 1.45
CDH5-204ENST00000563425 SSH3Q8TE77 659 aa24.1■■□□□ 1.45
CDH5-204ENST00000563425 ANXA1P04083 346 aa24.09■■□□□ 1.45
CDH5-204ENST00000563425 SPG7Q9UQ90 795 aa24.09■■□□□ 1.45
CDH5-204ENST00000563425 PHKG2P15735 406 aa24.07■■□□□ 1.44
CDH5-204ENST00000563425 CASC1Q6TDU7 716 aa24.07■■□□□ 1.44
CDH5-204ENST00000563425 SLC52A2Q9HAB3 445 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms