RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 PATL2C9JE40 543 aaKnown RBP9.17□□□□□ -0.94
TCF4-216ENST00000562680 NRXN1Q9ULB1 1477 aa9.17□□□□□ -0.94
TCF4-216ENST00000562680 MTHFSDQ2M296 383 aaKnown RBP9.17□□□□□ -0.94
TCF4-216ENST00000562680 PCDH11XQ9BZA7 1347 aa9.17□□□□□ -0.94
TCF4-216ENST00000562680 PCDH11YQ9BZA8 1340 aa9.17□□□□□ -0.94
TCF4-216ENST00000562680 SF3B2Q13435 895 aaKnown RBP9.17□□□□□ -0.94
TCF4-216ENST00000562680 VPS37DQ86XT2 251 aa9.17□□□□□ -0.94
TCF4-216ENST00000562680 PREX1Q8TCU6 1659 aa9.17□□□□□ -0.94
TCF4-216ENST00000562680 FRMPD1Q5SYB0 1578 aa9.17□□□□□ -0.94
TCF4-216ENST00000562680 AMOTL1Q8IY63 956 aa9.16□□□□□ -0.94
TCF4-216ENST00000562680 TRIM27P14373 513 aa9.16□□□□□ -0.94
TCF4-216ENST00000562680 MYL6BP14649 208 aa9.16□□□□□ -0.94
TCF4-216ENST00000562680 FBLN1P23142 703 aa9.16□□□□□ -0.94
TCF4-216ENST00000562680 CSPP1Q1MSJ5 1256 aa9.16□□□□□ -0.94
TCF4-216ENST00000562680 PHF23Q9BUL5 403 aaPredicted RBP9.16□□□□□ -0.94
TCF4-216ENST00000562680 MED14O60244 1454 aa9.16□□□□□ -0.94
TCF4-216ENST00000562680 MIS18AQ9NYP9 233 aa9.16□□□□□ -0.94
TCF4-216ENST00000562680 TULP4Q9NRJ4 1543 aa9.16□□□□□ -0.94
TCF4-216ENST00000562680 CDK12Q9NYV4 1490 aaPredicted RBP9.15□□□□□ -0.94
TCF4-216ENST00000562680 A0A087WZG4 1122 aa9.15□□□□□ -0.94
TCF4-216ENST00000562680 CHD1LQ86WJ1 897 aa9.15□□□□□ -0.94
TCF4-216ENST00000562680 DHX37Q8IY37 1157 aaKnown RBP9.15□□□□□ -0.94
TCF4-216ENST00000562680 SRGAP3O43295 1099 aa9.15□□□□□ -0.94
TCF4-216ENST00000562680 ALDH1L1O75891 902 aa9.15□□□□□ -0.94
TCF4-216ENST00000562680 TNNT3P45378 269 aaPredicted RBP9.15□□□□□ -0.94
TCF4-216ENST00000562680 CCDC57Q2TAC2 916 aa9.15□□□□□ -0.94
TCF4-216ENST00000562680 CPLX2Q6PUV4 134 aaKnown RBP9.15□□□□□ -0.94
TCF4-216ENST00000562680 PRR36Q9H6K5 1346 aa9.15□□□□□ -0.94
TCF4-216ENST00000562680 PIK3C2BO00750 1634 aa9.15□□□□□ -0.95
TCF4-216ENST00000562680 KIF1BPQ96EK5 621 aa9.15□□□□□ -0.95
TCF4-216ENST00000562680 RICTORQ6R327 1708 aa9.15□□□□□ -0.95
TCF4-216ENST00000562680 FAM83GA6ND36 823 aa9.14□□□□□ -0.95
TCF4-216ENST00000562680 NEUROD6Q96NK8 337 aa9.14□□□□□ -0.95
TCF4-216ENST00000562680 GNL3LQ9NVN8 582 aaKnown RBP9.14□□□□□ -0.95
TCF4-216ENST00000562680 TBC1D2BQ9UPU7 963 aa9.14□□□□□ -0.95
TCF4-216ENST00000562680 PTCD1O75127 700 aaKnown RBP9.14□□□□□ -0.95
TCF4-216ENST00000562680 ANO2Q9NQ90 1003 aa9.14□□□□□ -0.95
TCF4-216ENST00000562680 TECPR2O15040 1411 aa9.14□□□□□ -0.95
TCF4-216ENST00000562680 DDB1Q16531 1140 aa9.14□□□□□ -0.95
TCF4-216ENST00000562680 CCDC158Q5M9N0 1113 aa9.14□□□□□ -0.95
TCF4-216ENST00000562680 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.14□□□□□ -0.95
TCF4-216ENST00000562680 PHACTR3Q96KR7 559 aa9.14□□□□□ -0.95
TCF4-216ENST00000562680 CEP126Q9P2H0 1117 aa9.14□□□□□ -0.95
TCF4-216ENST00000562680 DIP2AQ14689 1571 aa9.14□□□□□ -0.95
TCF4-216ENST00000562680 C1orf115Q9H7X2 142 aa9.13□□□□□ -0.95
TCF4-216ENST00000562680 ATP6V1DQ9Y5K8 247 aa9.13□□□□□ -0.95
TCF4-216ENST00000562680 RNMTO43148 476 aaKnown RBP9.13□□□□□ -0.95
TCF4-216ENST00000562680 GNL2Q13823 731 aaKnown RBP9.13□□□□□ -0.95
TCF4-216ENST00000562680 CNNM1Q9NRU3 951 aa9.13□□□□□ -0.95
TCF4-216ENST00000562680 C22orf23Q9BZE7 217 aa9.13□□□□□ -0.95
TCF4-216ENST00000562680 SETD1BQ9UPS6 1966 aaKnown RBP9.13□□□□□ -0.95
TCF4-216ENST00000562680 KIAA0232Q92628 1395 aa9.13□□□□□ -0.95
TCF4-216ENST00000562680 QRICH2Q9H0J4 1663 aa9.13□□□□□ -0.95
TCF4-216ENST00000562680 VAMP4O75379 141 aa9.13□□□□□ -0.95
TCF4-216ENST00000562680 MCM2P49736 904 aa9.13□□□□□ -0.95
TCF4-216ENST00000562680 TRDNQ13061 729 aa9.13□□□□□ -0.95
TCF4-216ENST00000562680 MRPL50Q8N5N7 158 aaKnown RBP9.13□□□□□ -0.95
TCF4-216ENST00000562680 CABLES1Q8TDN4 633 aa9.12□□□□□ -0.95
TCF4-216ENST00000562680 SYAP1Q96A49 352 aaPredicted RBP9.12□□□□□ -0.95
TCF4-216ENST00000562680 CDC42BPGQ6DT37 1551 aa9.12□□□□□ -0.95
TCF4-216ENST00000562680 CHL1O00533 1208 aa9.12□□□□□ -0.95
TCF4-216ENST00000562680 CCDC34Q96HJ3 373 aa9.12□□□□□ -0.95
TCF4-216ENST00000562680 FSD1Q9BTV5 496 aa9.12□□□□□ -0.95
TCF4-216ENST00000562680 HDAC1Q13547 482 aaPredicted RBP9.12□□□□□ -0.95
TCF4-216ENST00000562680 ZSCAN25Q6NSZ9 544 aa9.12□□□□□ -0.95
TCF4-216ENST00000562680 SYNE3Q6ZMZ3 975 aa9.12□□□□□ -0.95
TCF4-216ENST00000562680 MPHOSPH8Q99549 860 aa9.12□□□□□ -0.95
TCF4-216ENST00000562680 AKAP2Q9Y2D5 859 aa9.12□□□□□ -0.95
TCF4-216ENST00000562680 PSMA5P28066 241 aa9.12□□□□□ -0.95
TCF4-216ENST00000562680 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.12□□□□□ -0.952e-6■■■■■ 33.9
TCF4-216ENST00000562680 USP31Q70CQ4 1352 aa9.11□□□□□ -0.95
TCF4-216ENST00000562680 ARHGEF25Q86VW2 580 aa9.11□□□□□ -0.95
TCF4-216ENST00000562680 ADAMTS13Q76LX8 1427 aa9.11□□□□□ -0.95
TCF4-216ENST00000562680 IGSF1Q8N6C5 1336 aa9.11□□□□□ -0.95
TCF4-216ENST00000562680 PTPRMP28827 1452 aa9.11□□□□□ -0.95
TCF4-216ENST00000562680 GLRX3O76003 335 aaKnown RBP9.11□□□□□ -0.95
TCF4-216ENST00000562680 KSR2Q6VAB6 950 aa9.11□□□□□ -0.95
TCF4-216ENST00000562680 MYD88Q99836 296 aa9.11□□□□□ -0.95
TCF4-216ENST00000562680 CEP170BQ9Y4F5 1589 aaPredicted RBP9.1□□□□□ -0.95
TCF4-216ENST00000562680 FAM43AQ8N2R8 423 aa9.1□□□□□ -0.95
TCF4-216ENST00000562680 C8orf58Q8NAV2 365 aa9.1□□□□□ -0.95
TCF4-216ENST00000562680 TOMM22Q9NS69 142 aa9.1□□□□□ -0.95
TCF4-216ENST00000562680 MROH1Q8NDA8 1641 aa9.1□□□□□ -0.95
TCF4-216ENST00000562680 IGHMBP2P38935 993 aaKnown RBP9.1□□□□□ -0.95
TCF4-216ENST00000562680 CWC25Q9NXE8 425 aaPredicted RBP9.1□□□□□ -0.95
TCF4-216ENST00000562680 ZPR1O75312 459 aa9.1□□□□□ -0.95
TCF4-216ENST00000562680 ANKRD13DQ6ZTN6 518 aa9.1□□□□□ -0.95
TCF4-216ENST00000562680 SLKQ9H2G2 1235 aaPredicted RBP9.1□□□□□ -0.95
TCF4-216ENST00000562680 BTG4Q9NY30 223 aa9.1□□□□□ -0.95
TCF4-216ENST00000562680 BCCIPQ9P287 314 aaKnown RBP eCLIP9.1□□□□□ -0.95
TCF4-216ENST00000562680 FBXO3Q9UK99 471 aa9.1□□□□□ -0.95
TCF4-216ENST00000562680 RABEP1Q15276 862 aa9.1□□□□□ -0.95
TCF4-216ENST00000562680 LINS1Q8NG48 757 aa9.1□□□□□ -0.95
TCF4-216ENST00000562680 TRIM35Q9UPQ4 493 aa9.1□□□□□ -0.95
TCF4-216ENST00000562680 NCOA3Q9Y6Q9 1424 aa9.1□□□□□ -0.95
TCF4-216ENST00000562680 BCORL1Q5H9F3 1711 aa9.1□□□□□ -0.95
TCF4-216ENST00000562680 PI4KAP2A4QPH2 592 aa9.09□□□□□ -0.95
TCF4-216ENST00000562680 C20orf194Q5TEA3 1177 aa9.09□□□□□ -0.95
TCF4-216ENST00000562680 PI4KAP1Q8N8J0 262 aa9.09□□□□□ -0.95
TCF4-216ENST00000562680 TTC39AQ5SRH9 613 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms