RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 IPO8O15397 1037 aaKnown RBP18.31■□□□□ 0.52
COMMD4-205ENST00000562310 ZKSCAN2Q63HK3 967 aa18.31■□□□□ 0.52
COMMD4-205ENST00000562310 BCL2L13Q9BXK5 485 aa18.31■□□□□ 0.52
COMMD4-205ENST00000562310 CHMP4AQ9BY43 222 aa18.31■□□□□ 0.52
COMMD4-205ENST00000562310 TNS2Q63HR2 1409 aa18.31■□□□□ 0.52
COMMD4-205ENST00000562310 SPATA31A1Q5TZJ5 1347 aa18.3■□□□□ 0.52
COMMD4-205ENST00000562310 HOXB7P09629 217 aa18.3■□□□□ 0.52
COMMD4-205ENST00000562310 FRAT1Q92837 279 aaPredicted RBP18.3■□□□□ 0.52
COMMD4-205ENST00000562310 MIS18AQ9NYP9 233 aa18.3■□□□□ 0.52
COMMD4-205ENST00000562310 BTBD11A6QL63 1104 aa18.29■□□□□ 0.52
COMMD4-205ENST00000562310 NKX1-1Q15270 411 aaPredicted RBP18.29■□□□□ 0.52
COMMD4-205ENST00000562310 SLC52A2Q9HAB3 445 aa18.29■□□□□ 0.52
COMMD4-205ENST00000562310 SPATA31A5Q5VU36 1347 aa18.28■□□□□ 0.52
COMMD4-205ENST00000562310 SPATA31A7Q8IWB4 1347 aa18.28■□□□□ 0.52
COMMD4-205ENST00000562310 PAPPAQ13219 1627 aa18.28■□□□□ 0.52
COMMD4-205ENST00000562310 MRPL50Q8N5N7 158 aaKnown RBP18.28■□□□□ 0.52
COMMD4-205ENST00000562310 CRBNQ96SW2 442 aa18.28■□□□□ 0.52
COMMD4-205ENST00000562310 USP35Q9P2H5 1018 aa18.28■□□□□ 0.52
COMMD4-205ENST00000562310 TOGARAM1Q9Y4F4 1720 aa18.27■□□□□ 0.52
COMMD4-205ENST00000562310 ELL2O00472 640 aaPredicted RBP18.27■□□□□ 0.52
COMMD4-205ENST00000562310 C20orf194Q5TEA3 1177 aa18.27■□□□□ 0.52
COMMD4-205ENST00000562310 ATF7IPQ6VMQ6 1270 aa18.27■□□□□ 0.52
COMMD4-205ENST00000562310 UNC5CLQ8IV45 518 aa18.27■□□□□ 0.52
COMMD4-205ENST00000562310 EXOC6Q8TAG9 804 aa18.27■□□□□ 0.52
COMMD4-205ENST00000562310 ARHGAP45Q92619 1136 aa18.27■□□□□ 0.52
COMMD4-205ENST00000562310 ERVV-2B6SEH9 535 aa18.26■□□□□ 0.51
COMMD4-205ENST00000562310 AAMPQ13685 434 aa18.26■□□□□ 0.51
COMMD4-205ENST00000562310 FNBP4Q8N3X1 1017 aaPredicted RBP18.26■□□□□ 0.51
COMMD4-205ENST00000562310 NGLY1Q96IV0 654 aa18.26■□□□□ 0.51
COMMD4-205ENST00000562310 BCL9LQ86UU0 1499 aa18.26■□□□□ 0.51
COMMD4-205ENST00000562310 UBR2Q8IWV8 1755 aa18.25■□□□□ 0.51
COMMD4-205ENST00000562310 EIF4A1P60842 406 aaKnown RBP18.25■□□□□ 0.51
COMMD4-205ENST00000562310 KRT24Q2M2I5 525 aa18.25■□□□□ 0.51
COMMD4-205ENST00000562310 BARGINQ6ZT62 677 aa18.25■□□□□ 0.51
COMMD4-205ENST00000562310 FTSJ3Q8IY81 847 aaKnown RBP18.25■□□□□ 0.51
COMMD4-205ENST00000562310 DZIP1LQ8IYY4 767 aaKnown RBP18.25■□□□□ 0.51
COMMD4-205ENST00000562310 C8orf37Q96NL8 207 aa18.25■□□□□ 0.51
COMMD4-205ENST00000562310 CABP4P57796 275 aa18.24■□□□□ 0.51
COMMD4-205ENST00000562310 VPS72Q15906 364 aa18.24■□□□□ 0.51
COMMD4-205ENST00000562310 CCDC30Q5VVM6 783 aa18.24■□□□□ 0.51
COMMD4-205ENST00000562310 NOB1Q9ULX3 412 aaKnown RBP18.24■□□□□ 0.51
COMMD4-205ENST00000562310 LAMB4A4D0S4 1761 aa18.24■□□□□ 0.51
COMMD4-205ENST00000562310 HEG1Q9ULI3 1381 aa18.23■□□□□ 0.51
COMMD4-205ENST00000562310 TRIM27P14373 513 aa18.23■□□□□ 0.51
COMMD4-205ENST00000562310 STK31Q9BXU1 1019 aa18.23■□□□□ 0.51
COMMD4-205ENST00000562310 API5Q9BZZ5 524 aaKnown RBP18.23■□□□□ 0.51
COMMD4-205ENST00000562310 PTPRCP08575 1304 aa18.23■□□□□ 0.51
COMMD4-205ENST00000562310 ITGB4P16144 1822 aa18.22■□□□□ 0.51
COMMD4-205ENST00000562310 EXOC5O00471 708 aa18.22■□□□□ 0.51
COMMD4-205ENST00000562310 MEX3CQ5U5Q3 659 aaKnown RBP18.22■□□□□ 0.51
COMMD4-205ENST00000562310 DDX54Q8TDD1 881 aaKnown RBP18.22■□□□□ 0.51
COMMD4-205ENST00000562310 PANK1Q8TE04 598 aa18.22■□□□□ 0.51
COMMD4-205ENST00000562310 N4BP2Q86UW6 1770 aaPredicted RBP18.22■□□□□ 0.51
COMMD4-205ENST00000562310 C5P01031 1676 aa18.22■□□□□ 0.51
COMMD4-205ENST00000562310 ZNF790Q6PG37 636 aa18.21■□□□□ 0.51
COMMD4-205ENST00000562310 NFATC2IPQ8NCF5 419 aa18.21■□□□□ 0.51
COMMD4-205ENST00000562310 CCDC136Q96JN2 1154 aa18.21■□□□□ 0.51
COMMD4-205ENST00000562310 CCDC9Q9Y3X0 531 aaKnown RBP18.21■□□□□ 0.51
COMMD4-205ENST00000562310 DOT1LQ8TEK3 1739 aa18.2■□□□□ 0.5
COMMD4-205ENST00000562310 THSD7AQ9UPZ6 1657 aa18.2■□□□□ 0.5
COMMD4-205ENST00000562310 MVPQ14764 893 aaKnown RBP18.2■□□□□ 0.5
COMMD4-205ENST00000562310 HDGFL1Q5TGJ6 251 aa18.2■□□□□ 0.5
COMMD4-205ENST00000562310 TTC5Q8N0Z6 440 aa18.2■□□□□ 0.5
COMMD4-205ENST00000562310 GLI3P10071 1580 aa18.19■□□□□ 0.5
COMMD4-205ENST00000562310 DDB1Q16531 1140 aa18.19■□□□□ 0.5
COMMD4-205ENST00000562310 USP21Q9UK80 565 aa18.19■□□□□ 0.5
COMMD4-205ENST00000562310 ABCC4O15439 1325 aa18.19■□□□□ 0.5
COMMD4-205ENST00000562310 KCNQ3O43525 872 aa18.18■□□□□ 0.5
COMMD4-205ENST00000562310 RLBP1P12271 317 aa18.18■□□□□ 0.5
COMMD4-205ENST00000562310 PELP1Q8IZL8 1130 aaKnown RBP18.18■□□□□ 0.5
COMMD4-205ENST00000562310 CHMP4BQ9H444 224 aaKnown RBP18.18■□□□□ 0.5
COMMD4-205ENST00000562310 DDX19BQ9UMR2 479 aa18.18■□□□□ 0.5
COMMD4-205ENST00000562310 COG6Q9Y2V7 657 aa18.18■□□□□ 0.5
COMMD4-205ENST00000562310 TCERG1O14776 1098 aaKnown RBP18.17■□□□□ 0.5
COMMD4-205ENST00000562310 GIGYF1O75420 1035 aaPredicted RBP18.17■□□□□ 0.5
COMMD4-205ENST00000562310 SLC4A2P04920 1241 aa18.17■□□□□ 0.5
COMMD4-205ENST00000562310 CLUAP1Q96AJ1 413 aa18.17■□□□□ 0.5
COMMD4-205ENST00000562310 RGS12O14924 1447 aa18.16■□□□□ 0.5
COMMD4-205ENST00000562310 PXDNLA1KZ92 1463 aa18.16■□□□□ 0.5
COMMD4-205ENST00000562310 B4GALNT3Q6L9W6 998 aa18.16■□□□□ 0.5
COMMD4-205ENST00000562310 FMNL2Q96PY5 1086 aa18.16■□□□□ 0.5
COMMD4-205ENST00000562310 TMOD3Q9NYL9 352 aa18.16■□□□□ 0.5
COMMD4-205ENST00000562310 TNNQ9UQP3 1299 aa18.16■□□□□ 0.5
COMMD4-205ENST00000562310 KCPQ6ZWJ8 1503 aa18.16■□□□□ 0.5
COMMD4-205ENST00000562310 ATRNO75882 1429 aa18.15■□□□□ 0.5
COMMD4-205ENST00000562310 AFF2P51816 1311 aa18.15■□□□□ 0.5
COMMD4-205ENST00000562310 SLC39A6Q13433 755 aa18.14■□□□□ 0.49
COMMD4-205ENST00000562310 ITPRIPQ8IWB1 547 aa18.14■□□□□ 0.49
COMMD4-205ENST00000562310 TMEM57Q8N5G2 664 aa18.14■□□□□ 0.49
COMMD4-205ENST00000562310 SNRPA1P09661 255 aaKnown RBP18.13■□□□□ 0.49
COMMD4-205ENST00000562310 DBF4Q9UBU7 674 aaPredicted RBP18.13■□□□□ 0.49
COMMD4-205ENST00000562310 BCL9O00512 1426 aa18.13■□□□□ 0.49
COMMD4-205ENST00000562310 FLIIQ13045 1269 aa18.12■□□□□ 0.49
COMMD4-205ENST00000562310 ZNF496Q96IT1 587 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-205ENST00000562310 RGS17Q9UGC6 210 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-205ENST00000562310 EIF2S2P20042 333 aaKnown RBP18.11■□□□□ 0.49
COMMD4-205ENST00000562310 TRPC5Q9UL62 973 aaPredicted RBP18.11■□□□□ 0.49
COMMD4-205ENST00000562310 ERBB4Q15303 1308 aa18.1■□□□□ 0.49
COMMD4-205ENST00000562310 FAM98CQ17RN3 349 aaKnown RBP18.1■□□□□ 0.49
COMMD4-205ENST00000562310 INTS3Q68E01 1043 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms