RNA–Protein interactions for RNA: ENST00000561544.1

AC009065.7-201, humanhuman

TSL 3 BASIC

Gene AC009065.7, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009065.7-201ENST00000561544 CEMIPQ8WUJ3 1361 aa16■□□□□ 0.15
AC009065.7-201ENST00000561544 KDM3BQ7LBC6 1761 aa16■□□□□ 0.15
AC009065.7-201ENST00000561544 NEFMP07197 916 aa16■□□□□ 0.15
AC009065.7-201ENST00000561544 KCNQ4P56696 695 aa16■□□□□ 0.15
AC009065.7-201ENST00000561544 CABP4P57796 275 aa16■□□□□ 0.15
AC009065.7-201ENST00000561544 NFE2L2Q16236 605 aa16■□□□□ 0.15
AC009065.7-201ENST00000561544 IL17REQ8NFR9 667 aa16■□□□□ 0.15
AC009065.7-201ENST00000561544 SLC52A2Q9HAB3 445 aa16■□□□□ 0.15
AC009065.7-201ENST00000561544 ASAP1Q9ULH1 1129 aa16■□□□□ 0.15
AC009065.7-201ENST00000561544 KCPQ6ZWJ8 1503 aa15.99■□□□□ 0.15
AC009065.7-201ENST00000561544 DCTN1Q14203 1278 aa15.99■□□□□ 0.15
AC009065.7-201ENST00000561544 MCM10Q7L590 875 aa15.99■□□□□ 0.15
AC009065.7-201ENST00000561544 NFATC2IPQ8NCF5 419 aa15.99■□□□□ 0.15
AC009065.7-201ENST00000561544 PNNQ9H307 717 aaKnown RBP15.99■□□□□ 0.15
AC009065.7-201ENST00000561544 LRRC4BQ9NT99 713 aa15.99■□□□□ 0.15
AC009065.7-201ENST00000561544 C4BP0C0L5 1744 aa15.99■□□□□ 0.15
AC009065.7-201ENST00000561544 QSER1Q2KHR3 1735 aa15.98■□□□□ 0.15
AC009065.7-201ENST00000561544 PNISRQ8TF01 805 aaKnown RBP15.98■□□□□ 0.15
AC009065.7-201ENST00000561544 RUNDC1Q96C34 613 aa15.98■□□□□ 0.15
AC009065.7-201ENST00000561544 ANO8Q9HCE9 1232 aaPredicted RBP15.98■□□□□ 0.15
AC009065.7-201ENST00000561544 ATG3Q9NT62 314 aa15.98■□□□□ 0.15
AC009065.7-201ENST00000561544 RRP7AQ9Y3A4 280 aaKnown RBP15.98■□□□□ 0.15
AC009065.7-201ENST00000561544 CASZ1Q86V15 1759 aa15.97■□□□□ 0.15
AC009065.7-201ENST00000561544 TMPOP42166 694 aaKnown RBP15.96■□□□□ 0.15
AC009065.7-201ENST00000561544 THUMPD2Q9BTF0 503 aaKnown RBP15.96■□□□□ 0.15
AC009065.7-201ENST00000561544 CCNL1Q9UK58 526 aaPredicted RBP15.96■□□□□ 0.15
AC009065.7-201ENST00000561544 UBR3Q6ZT12 1888 aa15.96■□□□□ 0.15
AC009065.7-201ENST00000561544 SENP3-EIF4A1A0A087X0R7 540 aa15.95■□□□□ 0.14
AC009065.7-201ENST00000561544 TEFQ10587 303 aa15.95■□□□□ 0.14
AC009065.7-201ENST00000561544 SLC39A6Q13433 755 aa15.95■□□□□ 0.14
AC009065.7-201ENST00000561544 RTF1Q92541 710 aaKnown RBP15.95■□□□□ 0.14
AC009065.7-201ENST00000561544 SMARCC1Q92922 1105 aaPredicted RBP15.95■□□□□ 0.14
AC009065.7-201ENST00000561544 RIPK4P57078 832 aa15.94■□□□□ 0.14
AC009065.7-201ENST00000561544 NEUROD2Q15784 382 aa15.94■□□□□ 0.14
AC009065.7-201ENST00000561544 LAMB4A4D0S4 1761 aa15.93■□□□□ 0.14
AC009065.7-201ENST00000561544 PSDA5PKW4 1024 aaPredicted RBP15.93■□□□□ 0.14
AC009065.7-201ENST00000561544 HTATSF1O43719 755 aaKnown RBP15.93■□□□□ 0.14
AC009065.7-201ENST00000561544 ZNF827Q17R98 1081 aa15.93■□□□□ 0.14
AC009065.7-201ENST00000561544 SLC27A3Q5K4L6 730 aa15.93■□□□□ 0.14
AC009065.7-201ENST00000561544 FAM9BQ8IZU0 186 aa15.93■□□□□ 0.14
AC009065.7-201ENST00000561544 MIER1Q8N108 512 aa15.93■□□□□ 0.14
AC009065.7-201ENST00000561544 SLC4A9Q96Q91 983 aa15.93■□□□□ 0.14
AC009065.7-201ENST00000561544 MYH14Q7Z406 1995 aaKnown RBP15.93■□□□□ 0.14
AC009065.7-201ENST00000561544 LOC102724428A0A0B4J2F2 783 aa15.92■□□□□ 0.14
AC009065.7-201ENST00000561544 APAF1O14727 1248 aa15.92■□□□□ 0.14
AC009065.7-201ENST00000561544 PTCD1O75127 700 aaKnown RBP15.92■□□□□ 0.14
AC009065.7-201ENST00000561544 SIK1P57059 783 aa15.92■□□□□ 0.14
AC009065.7-201ENST00000561544 R3HDM1Q15032 1099 aaKnown RBP15.92■□□□□ 0.14
AC009065.7-201ENST00000561544 RBM42Q9BTD8 480 aaKnown RBP15.92■□□□□ 0.14
AC009065.7-201ENST00000561544 ITPK1Q13572 414 aa15.91■□□□□ 0.14
AC009065.7-201ENST00000561544 TRIM35Q9UPQ4 493 aa15.91■□□□□ 0.14
AC009065.7-201ENST00000561544 C4AP0C0L4 1744 aa15.91■□□□□ 0.14
AC009065.7-201ENST00000561544 LINC00116Q8NCU8 138 aa15.9■□□□□ 0.14
AC009065.7-201ENST00000561544 CCER2I3L3R5 266 aa15.89■□□□□ 0.13
AC009065.7-201ENST00000561544 KCNQ3O43525 872 aa15.89■□□□□ 0.13
AC009065.7-201ENST00000561544 ATP6V1AP38606 617 aa15.89■□□□□ 0.13
AC009065.7-201ENST00000561544 BTBD11A6QL63 1104 aa15.88■□□□□ 0.13
AC009065.7-201ENST00000561544 LMOD3Q0VAK6 560 aa15.88■□□□□ 0.13
AC009065.7-201ENST00000561544 NBPF14Q5TI25 921 aa15.88■□□□□ 0.13
AC009065.7-201ENST00000561544 ZNF790Q6PG37 636 aa15.88■□□□□ 0.13
AC009065.7-201ENST00000561544 AKT1S1Q96B36 256 aa15.88■□□□□ 0.13
AC009065.7-201ENST00000561544 STK32BQ9NY57 414 aa15.88■□□□□ 0.13
AC009065.7-201ENST00000561544 SLC15A2Q16348 729 aa15.87■□□□□ 0.13
AC009065.7-201ENST00000561544 TTC5Q8N0Z6 440 aa15.87■□□□□ 0.13
AC009065.7-201ENST00000561544 ZNF496Q96IT1 587 aaPredicted RBP15.87■□□□□ 0.13
AC009065.7-201ENST00000561544 MIS18AQ9NYP9 233 aa15.87■□□□□ 0.13
AC009065.7-201ENST00000561544 TAF7Q15545 349 aaPredicted RBP15.86■□□□□ 0.13
AC009065.7-201ENST00000561544 PDGFDQ9GZP0 370 aaPredicted RBP15.86■□□□□ 0.13
AC009065.7-201ENST00000561544 AMIGO3Q86WK7 504 aa15.85■□□□□ 0.13
AC009065.7-201ENST00000561544 DNAJC10Q8IXB1 793 aa15.85■□□□□ 0.13
AC009065.7-201ENST00000561544 HEG1Q9ULI3 1381 aa15.85■□□□□ 0.13
AC009065.7-201ENST00000561544 LRP5O75197 1615 aa15.84■□□□□ 0.13
AC009065.7-201ENST00000561544 SMIM5Q71RC9 77 aa15.84■□□□□ 0.13
AC009065.7-201ENST00000561544 PNPLA7Q6ZV29 1317 aa15.84■□□□□ 0.13
AC009065.7-201ENST00000561544 AK7Q96M32 723 aa15.83■□□□□ 0.12
AC009065.7-201ENST00000561544 TFCP2L1Q9NZI6 479 aa15.83■□□□□ 0.12
AC009065.7-201ENST00000561544 COL24A1Q17RW2 1714 aa15.82■□□□□ 0.12
AC009065.7-201ENST00000561544 PRAMEF22A3QJZ6 481 aa15.82■□□□□ 0.12
AC009065.7-201ENST00000561544 FMNL2Q96PY5 1086 aa15.82■□□□□ 0.12
AC009065.7-201ENST00000561544 SALL2Q9Y467 1007 aaPredicted RBP15.82■□□□□ 0.12
AC009065.7-201ENST00000561544 GNPATO15228 680 aa15.81■□□□□ 0.12
AC009065.7-201ENST00000561544 PHF14O94880 888 aa15.81■□□□□ 0.12
AC009065.7-201ENST00000561544 CRKLP46109 303 aaKnown RBP15.81■□□□□ 0.12
AC009065.7-201ENST00000561544 CNTNAP4Q9C0A0 1308 aa15.81■□□□□ 0.12
AC009065.7-201ENST00000561544 TSPYL4Q9UJ04 414 aa15.81■□□□□ 0.12
AC009065.7-201ENST00000561544 LAS1LQ9Y4W2 734 aaKnown RBP15.81■□□□□ 0.12
AC009065.7-201ENST00000561544 CYP19A1P11511 503 aaPredicted RBP15.8■□□□□ 0.12
AC009065.7-201ENST00000561544 VSIG10Q8N0Z9 540 aa15.8■□□□□ 0.12
AC009065.7-201ENST00000561544 SCN7AQ01118 1682 aa15.79■□□□□ 0.12
AC009065.7-201ENST00000561544 EIF4A1P60842 406 aaKnown RBP15.79■□□□□ 0.12
AC009065.7-201ENST00000561544 WWC1Q8IX03 1113 aa15.79■□□□□ 0.12
AC009065.7-201ENST00000561544 BCORQ6W2J9 1755 aa15.79■□□□□ 0.12
AC009065.7-201ENST00000561544 CCDC27Q2M243 656 aa15.78■□□□□ 0.12
AC009065.7-201ENST00000561544 INTS5Q6P9B9 1019 aaKnown RBP15.78■□□□□ 0.12
AC009065.7-201ENST00000561544 COL23A1Q86Y22 540 aaPredicted RBP15.78■□□□□ 0.12
AC009065.7-201ENST00000561544 CCDC87Q9NVE4 849 aa15.78■□□□□ 0.12
AC009065.7-201ENST00000561544 ZBTB1Q9Y2K1 713 aa15.78■□□□□ 0.12
AC009065.7-201ENST00000561544 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.77■□□□□ 0.12
AC009065.7-201ENST00000561544 CHL1O00533 1208 aa15.77■□□□□ 0.12
AC009065.7-201ENST00000561544 ZBTB7AO95365 584 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms