RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 LRRC4BQ9NT99 713 aa9.91□□□□□ -0.82
TPM1-231ENST00000561395 AXIN2Q9Y2T1 843 aa9.91□□□□□ -0.82
TPM1-231ENST00000561395 SALL2Q9Y467 1007 aaPredicted RBP9.91□□□□□ -0.82
TPM1-231ENST00000561395 NFAT5O94916 1531 aa9.91□□□□□ -0.82
TPM1-231ENST00000561395 APAF1O14727 1248 aa9.9□□□□□ -0.82
TPM1-231ENST00000561395 U2SURPO15042 1029 aaKnown RBP9.9□□□□□ -0.82
TPM1-231ENST00000561395 NLRP6P59044 892 aa9.9□□□□□ -0.82
TPM1-231ENST00000561395 AKT1S1Q96B36 256 aa9.9□□□□□ -0.82
TPM1-231ENST00000561395 FAM208AQ9UK61 1670 aaKnown RBP9.9□□□□□ -0.83
TPM1-231ENST00000561395 PPM1GO15355 546 aaPredicted RBP9.89□□□□□ -0.83
TPM1-231ENST00000561395 CSB-PGBD3P0DP91 1061 aa9.89□□□□□ -0.83
TPM1-231ENST00000561395 DSG3P32926 999 aa9.89□□□□□ -0.83
TPM1-231ENST00000561395 IL13P35225 146 aa9.89□□□□□ -0.83
TPM1-231ENST00000561395 KIF24Q5T7B8 1368 aa9.88□□□□□ -0.83
TPM1-231ENST00000561395 MAP3K19Q56UN5 1328 aa9.88□□□□□ -0.83
TPM1-231ENST00000561395 PLEKHF1Q96S99 279 aa9.88□□□□□ -0.83
TPM1-231ENST00000561395 FLT4P35916 1363 aa9.88□□□□□ -0.83
TPM1-231ENST00000561395 CICQ96RK0 1608 aaPredicted RBP9.87□□□□□ -0.83
TPM1-231ENST00000561395 APLP1P51693 650 aa9.87□□□□□ -0.83
TPM1-231ENST00000561395 MKRN4PQ13434 485 aaPredicted RBP9.87□□□□□ -0.83
TPM1-231ENST00000561395 CDCA7LQ96GN5 454 aa9.87□□□□□ -0.83
TPM1-231ENST00000561395 SUPT16HQ9Y5B9 1047 aaKnown RBP9.87□□□□□ -0.83
TPM1-231ENST00000561395 RTL1A6NKG5 1358 aa9.87□□□□□ -0.83
TPM1-231ENST00000561395 RGPD2P0DJD1 1756 aa9.86□□□□□ -0.83
TPM1-231ENST00000561395 KIF3CO14782 793 aa9.86□□□□□ -0.83
TPM1-231ENST00000561395 SOX12O15370 315 aa9.86□□□□□ -0.83
TPM1-231ENST00000561395 FCHSD2O94868 740 aa9.86□□□□□ -0.83
TPM1-231ENST00000561395 NEFLP07196 543 aa9.86□□□□□ -0.83
TPM1-231ENST00000561395 GOLGA2Q08379 1002 aa9.86□□□□□ -0.83
TPM1-231ENST00000561395 CCDC27Q2M243 656 aa9.86□□□□□ -0.83
TPM1-231ENST00000561395 SLC27A3Q5K4L6 730 aa9.86□□□□□ -0.83
TPM1-231ENST00000561395 ARHGEF25Q86VW2 580 aa9.86□□□□□ -0.83
TPM1-231ENST00000561395 RSPH6AQ9H0K4 717 aa9.86□□□□□ -0.83
TPM1-231ENST00000561395 PNNQ9H307 717 aaKnown RBP9.86□□□□□ -0.83
TPM1-231ENST00000561395 TFCP2L1Q9NZI6 479 aa9.86□□□□□ -0.83
TPM1-231ENST00000561395 MAPK8IP3Q9UPT6 1336 aa9.85□□□□□ -0.83
TPM1-231ENST00000561395 UBR3Q6ZT12 1888 aa9.85□□□□□ -0.83
TPM1-231ENST00000561395 TOGARAM1Q9Y4F4 1720 aa9.85□□□□□ -0.83
TPM1-231ENST00000561395 EIF4A2Q14240 407 aaKnown RBP9.85□□□□□ -0.83
TPM1-231ENST00000561395 COL13A1Q5TAT6 717 aaPredicted RBP9.85□□□□□ -0.83
TPM1-231ENST00000561395 DLG5Q8TDM6 1919 aa9.85□□□□□ -0.83
TPM1-231ENST00000561395 PKD1L3Q7Z443 1732 aa9.85□□□□□ -0.83
TPM1-231ENST00000561395 RNF123Q5XPI4 1314 aa9.84□□□□□ -0.83
TPM1-231ENST00000561395 KIF13BQ9NQT8 1826 aa9.84□□□□□ -0.83
TPM1-231ENST00000561395 N4BP2Q86UW6 1770 aaPredicted RBP9.84□□□□□ -0.83
TPM1-231ENST00000561395 SLFN5Q08AF3 891 aa9.84□□□□□ -0.83
TPM1-231ENST00000561395 DUSP27Q5VZP5 1158 aa9.84□□□□□ -0.83
TPM1-231ENST00000561395 WWC1Q8IX03 1113 aa9.84□□□□□ -0.83
TPM1-231ENST00000561395 TRMT2AQ8IZ69 625 aaKnown RBP9.84□□□□□ -0.83
TPM1-231ENST00000561395 DNAJC5GQ8N7S2 189 aa9.84□□□□□ -0.83
TPM1-231ENST00000561395 RRP7AQ9Y3A4 280 aaKnown RBP9.84□□□□□ -0.83
TPM1-231ENST00000561395 BRCA1P38398 1863 aaKnown RBP9.84□□□□□ -0.83
TPM1-231ENST00000561395 KIAA1551Q9HCM1 1747 aa9.84□□□□□ -0.83
TPM1-231ENST00000561395 E9PSI1 815 aa9.83□□□□□ -0.84
TPM1-231ENST00000561395 PRKAR2BP31323 418 aa9.83□□□□□ -0.84
TPM1-231ENST00000561395 TMPOP42166 694 aaKnown RBP9.83□□□□□ -0.84
TPM1-231ENST00000561395 AMPHP49418 695 aa9.83□□□□□ -0.84
TPM1-231ENST00000561395 KCNQ4P56696 695 aa9.83□□□□□ -0.84
TPM1-231ENST00000561395 HSP90AB2PQ58FF8 381 aa9.83□□□□□ -0.84
TPM1-231ENST00000561395 MSL1Q68DK7 614 aa9.83□□□□□ -0.84
TPM1-231ENST00000561395 KCNH5Q8NCM2 988 aa9.83□□□□□ -0.84
TPM1-231ENST00000561395 PCNTO95613 3336 aa9.82□□□□□ -0.84
TPM1-231ENST00000561395 HMOX1P09601 288 aa9.82□□□□□ -0.84
TPM1-231ENST00000561395 IL2RBP14784 551 aa9.82□□□□□ -0.84
TPM1-231ENST00000561395 HOXC9P31274 260 aa9.82□□□□□ -0.84
TPM1-231ENST00000561395 PRELPP51888 382 aa9.82□□□□□ -0.84
TPM1-231ENST00000561395 WDR63Q8IWG1 891 aa9.82□□□□□ -0.84
TPM1-231ENST00000561395 ITGB4P16144 1822 aa9.82□□□□□ -0.84
TPM1-231ENST00000561395 ERBB3P21860 1342 aa9.82□□□□□ -0.84
TPM1-231ENST00000561395 KDRP35968 1356 aa9.81□□□□□ -0.84
TPM1-231ENST00000561395 NEFMP07197 916 aa9.81□□□□□ -0.84
TPM1-231ENST00000561395 NEUROD2Q15784 382 aa9.81□□□□□ -0.84
TPM1-231ENST00000561395 NFE2L2Q16236 605 aa9.81□□□□□ -0.84
TPM1-231ENST00000561395 TNS4Q8IZW8 715 aa9.81□□□□□ -0.84
TPM1-231ENST00000561395 RCAN3Q9UKA8 241 aa9.81□□□□□ -0.84
TPM1-231ENST00000561395 CD2APQ9Y5K6 639 aa9.81□□□□□ -0.84
TPM1-231ENST00000561395 C4BP0C0L5 1744 aa9.81□□□□□ -0.84
TPM1-231ENST00000561395 IGSF1Q8N6C5 1336 aa9.81□□□□□ -0.84
TPM1-231ENST00000561395 TNRC6CQ9HCJ0 1690 aaKnown RBP9.8□□□□□ -0.84
TPM1-231ENST00000561395 ARFGEF1Q9Y6D6 1849 aa9.8□□□□□ -0.84
TPM1-231ENST00000561395 HMGB2P26583 209 aaKnown RBP9.8□□□□□ -0.84
TPM1-231ENST00000561395 SULT6B1Q6IMI4 303 aa9.8□□□□□ -0.84
TPM1-231ENST00000561395 COL23A1Q86Y22 540 aaPredicted RBP9.8□□□□□ -0.84
TPM1-231ENST00000561395 AEBP1Q8IUX7 1158 aa9.8□□□□□ -0.84
TPM1-231ENST00000561395 IP6K1Q92551 441 aa9.8□□□□□ -0.84
TPM1-231ENST00000561395 PHACTR3Q96KR7 559 aa9.8□□□□□ -0.84
TPM1-231ENST00000561395 NLRP2Q9NX02 1062 aa9.8□□□□□ -0.84
TPM1-231ENST00000561395 TRIM35Q9UPQ4 493 aa9.8□□□□□ -0.84
TPM1-231ENST00000561395 IL16Q14005 1332 aa9.8□□□□□ -0.84
TPM1-231ENST00000561395 TOMM70O94826 608 aa9.79□□□□□ -0.84
TPM1-231ENST00000561395 RIPK4P57078 832 aa9.79□□□□□ -0.84
TPM1-231ENST00000561395 WWC3Q9ULE0 1092 aa9.79□□□□□ -0.84
TPM1-231ENST00000561395 RRP1P56182 461 aaKnown RBP9.78□□□□□ -0.84
TPM1-231ENST00000561395 ERICH6BQ5W0A0 696 aa9.78□□□□□ -0.84
TPM1-231ENST00000561395 JMYQ8N9B5 988 aa9.78□□□□□ -0.84
TPM1-231ENST00000561395 SYTL4Q96C24 671 aaPredicted RBP9.78□□□□□ -0.84
TPM1-231ENST00000561395 KLRG1Q96E93 195 aa9.78□□□□□ -0.84
TPM1-231ENST00000561395 EYA1Q99502 592 aa9.78□□□□□ -0.84
TPM1-231ENST00000561395 CCNL1Q9UK58 526 aaPredicted RBP9.78□□□□□ -0.84
TPM1-231ENST00000561395 NCAPD2Q15021 1401 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms