RNA–Protein interactions for RNA: ENST00000561119.5

CRTC3-211, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 5

Gene CRTC3, Length 630 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-211ENST00000561119 MPHOSPH9Q99550 1183 aa13.81□□□□□ -0.2
CRTC3-211ENST00000561119 DLL1O00548 723 aa13.8□□□□□ -0.2
CRTC3-211ENST00000561119 LMNB1P20700 586 aa13.8□□□□□ -0.2
CRTC3-211ENST00000561119 BEGAINQ9BUH8 593 aa13.8□□□□□ -0.2
CRTC3-211ENST00000561119 PASKQ96RG2 1323 aa13.8□□□□□ -0.2
CRTC3-211ENST00000561119 CASP8AP2Q9UKL3 1982 aa13.8□□□□□ -0.2
CRTC3-211ENST00000561119 TMF1P82094 1093 aa13.79□□□□□ -0.2
CRTC3-211ENST00000561119 PARP3Q9Y6F1 533 aa13.79□□□□□ -0.2
CRTC3-211ENST00000561119 CCDC88AQ3V6T2 1871 aa13.78□□□□□ -0.2
CRTC3-211ENST00000561119 PAXIP1Q6ZW49 1069 aaPredicted RBP13.78□□□□□ -0.2
CRTC3-211ENST00000561119 DCAF11Q8TEB1 546 aa13.78□□□□□ -0.2
CRTC3-211ENST00000561119 ZC3H4Q9UPT8 1303 aaKnown RBP13.78□□□□□ -0.2
CRTC3-211ENST00000561119 DPY19L2Q6NUT2 758 aa13.77□□□□□ -0.21
CRTC3-211ENST00000561119 ABT1Q9ULW3 272 aaKnown RBP13.77□□□□□ -0.21
CRTC3-211ENST00000561119 TIAM2Q8IVF5 1701 aa13.76□□□□□ -0.21
CRTC3-211ENST00000561119 NSD3Q9BZ95 1437 aa13.76□□□□□ -0.21
CRTC3-211ENST00000561119 KDM6AO15550 1401 aaPredicted RBP13.75□□□□□ -0.21
CRTC3-211ENST00000561119 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.75□□□□□ -0.21
CRTC3-211ENST00000561119 NLGN1Q8N2Q7 840 aa13.75□□□□□ -0.21
CRTC3-211ENST00000561119 LTN1O94822 1766 aa13.75□□□□□ -0.21
CRTC3-211ENST00000561119 C4AP0C0L4 1744 aa13.75□□□□□ -0.21
CRTC3-211ENST00000561119 RASSF10A6NK89 507 aa13.74□□□□□ -0.21
CRTC3-211ENST00000561119 DDNO94850 711 aaPredicted RBP13.74□□□□□ -0.21
CRTC3-211ENST00000561119 ITPK1Q13572 414 aa13.74□□□□□ -0.21
CRTC3-211ENST00000561119 HABP4Q5JVS0 413 aaKnown RBP13.74□□□□□ -0.21
CRTC3-211ENST00000561119 ITGBL1O95965 494 aaPredicted RBP13.73□□□□□ -0.21
CRTC3-211ENST00000561119 HMGB2P26583 209 aaKnown RBP13.73□□□□□ -0.21
CRTC3-211ENST00000561119 TRAPPC3LQ5T215 181 aa13.73□□□□□ -0.21
CRTC3-211ENST00000561119 MEGF6O75095 1541 aa13.73□□□□□ -0.21
CRTC3-211ENST00000561119 EAPPQ56P03 285 aaPredicted RBP13.72□□□□□ -0.21
CRTC3-211ENST00000561119 CYP4F22Q6NT55 531 aa13.72□□□□□ -0.21
CRTC3-211ENST00000561119 CLEC11AQ9Y240 323 aa13.72□□□□□ -0.21
CRTC3-211ENST00000561119 LOC102724428A0A0B4J2F2 783 aa13.71□□□□□ -0.21
CRTC3-211ENST00000561119 GYS1P13807 737 aa13.71□□□□□ -0.21
CRTC3-211ENST00000561119 SIK1P57059 783 aa13.71□□□□□ -0.21
CRTC3-211ENST00000561119 LDHDQ86WU2 507 aa13.71□□□□□ -0.21
CRTC3-211ENST00000561119 ARHGEF1Q92888 912 aaKnown RBP13.71□□□□□ -0.21
CRTC3-211ENST00000561119 SMARCC1Q92922 1105 aaPredicted RBP13.71□□□□□ -0.21
CRTC3-211ENST00000561119 CAPNS2Q96L46 248 aa13.71□□□□□ -0.21
CRTC3-211ENST00000561119 GPR101Q96P66 508 aaPredicted RBP13.71□□□□□ -0.21
CRTC3-211ENST00000561119 AOC2O75106 756 aa13.7□□□□□ -0.22
CRTC3-211ENST00000561119 NME9Q86XW9 330 aa13.7□□□□□ -0.22
CRTC3-211ENST00000561119 USHBP1Q8N6Y0 703 aa13.7□□□□□ -0.22
CRTC3-211ENST00000561119 TTC21AQ8NDW8 1320 aa13.69□□□□□ -0.22
CRTC3-211ENST00000561119 RGPD2P0DJD1 1756 aa13.69□□□□□ -0.22
CRTC3-211ENST00000561119 NFKBIEO00221 500 aa13.69□□□□□ -0.22
CRTC3-211ENST00000561119 ATP6V1AP38606 617 aa13.69□□□□□ -0.22
CRTC3-211ENST00000561119 NBPF1Q3BBV0 1214 aa13.69□□□□□ -0.22
CRTC3-211ENST00000561119 ERFEQ4G0M1 354 aa13.69□□□□□ -0.22
CRTC3-211ENST00000561119 PIGBQ92521 554 aa13.69□□□□□ -0.22
CRTC3-211ENST00000561119 FMR1Q06787 632 aaKnown RBP eCLIP13.68□□□□□ -0.22
CRTC3-211ENST00000561119 MAP1SQ66K74 1059 aaPredicted RBP13.68□□□□□ -0.22
CRTC3-211ENST00000561119 GCC1Q96CN9 775 aa13.68□□□□□ -0.22
CRTC3-211ENST00000561119 RTCBQ9Y3I0 505 aaKnown RBP13.68□□□□□ -0.22
CRTC3-211ENST00000561119 RFC4P35249 363 aa13.67□□□□□ -0.22
CRTC3-211ENST00000561119 DDR1Q08345 913 aa13.67□□□□□ -0.22
CRTC3-211ENST00000561119 ZNF692Q9BU19 519 aaPredicted RBP13.67□□□□□ -0.22
CRTC3-211ENST00000561119 LTBP1Q14766 1721 aa13.67□□□□□ -0.22
CRTC3-211ENST00000561119 TAF1DQ9H5J8 278 aaPredicted RBP13.66□□□□□ -0.22
CRTC3-211ENST00000561119 SRP68Q9UHB9 627 aaKnown RBP13.66□□□□□ -0.22
CRTC3-211ENST00000561119 ASAP1Q9ULH1 1129 aa13.66□□□□□ -0.22
CRTC3-211ENST00000561119 ITGB4P16144 1822 aa13.65□□□□□ -0.22
CRTC3-211ENST00000561119 CNTROBQ8N137 903 aa13.65□□□□□ -0.22
CRTC3-211ENST00000561119 IP6K1Q92551 441 aa13.65□□□□□ -0.22
CRTC3-211ENST00000561119 KTN1Q86UP2 1357 aaKnown RBP13.65□□□□□ -0.22
CRTC3-211ENST00000561119 CENPJQ9HC77 1338 aaPredicted RBP13.64□□□□□ -0.23
CRTC3-211ENST00000561119 MAP2P11137 1827 aaKnown RBP13.64□□□□□ -0.23
CRTC3-211ENST00000561119 FAM208AQ9UK61 1670 aaKnown RBP13.64□□□□□ -0.23
CRTC3-211ENST00000561119 FXR1P51114 621 aaKnown RBP eCLIP13.64□□□□□ -0.23
CRTC3-211ENST00000561119 FKBP8Q14318 412 aa13.64□□□□□ -0.23
CRTC3-211ENST00000561119 FBLN1P23142 703 aa13.63□□□□□ -0.23
CRTC3-211ENST00000561119 NBPF15Q8N660 670 aa13.63□□□□□ -0.23
CRTC3-211ENST00000561119 ECE1P42892 770 aa13.62□□□□□ -0.23
CRTC3-211ENST00000561119 SLC17A8Q8NDX2 589 aa13.62□□□□□ -0.23
CRTC3-211ENST00000561119 CYP27B1O15528 508 aa13.61□□□□□ -0.23
CRTC3-211ENST00000561119 NBPF6Q5VWK0 638 aa13.61□□□□□ -0.23
CRTC3-211ENST00000561119 TTLL6Q8N841 843 aa13.61□□□□□ -0.23
CRTC3-211ENST00000561119 RAPGEF4Q8WZA2 1011 aa13.61□□□□□ -0.23
CRTC3-211ENST00000561119 NBPF4Q96M43 638 aa13.61□□□□□ -0.23
CRTC3-211ENST00000561119 IQCA1LA6NCM1 817 aa13.6□□□□□ -0.23
CRTC3-211ENST00000561119 THSD7BQ9C0I4 1608 aa13.6□□□□□ -0.23
CRTC3-211ENST00000561119 TATP17735 454 aaPredicted RBP13.59□□□□□ -0.23
CRTC3-211ENST00000561119 DDX21Q9NR30 783 aaKnown RBP eCLIP13.59□□□□□ -0.23
CRTC3-211ENST00000561119 PCDH11XQ9BZA7 1347 aa13.59□□□□□ -0.23
CRTC3-211ENST00000561119 PCDH11YQ9BZA8 1340 aa13.59□□□□□ -0.23
CRTC3-211ENST00000561119 USP31Q70CQ4 1352 aa13.58□□□□□ -0.23
CRTC3-211ENST00000561119 POLRMTO00411 1230 aaKnown RBP13.58□□□□□ -0.24
CRTC3-211ENST00000561119 C21orf2O43822 256 aa13.58□□□□□ -0.24
CRTC3-211ENST00000561119 DICER1Q9UPY3 1922 aaKnown RBP13.57□□□□□ -0.24
CRTC3-211ENST00000561119 HOXC9P31274 260 aa13.57□□□□□ -0.24
CRTC3-211ENST00000561119 AMPHP49418 695 aa13.57□□□□□ -0.24
CRTC3-211ENST00000561119 CIAPIN1Q6FI81 312 aa13.57□□□□□ -0.24
CRTC3-211ENST00000561119 C2CD5Q86YS7 1000 aa13.57□□□□□ -0.24
CRTC3-211ENST00000561119 RBM42Q9BTD8 480 aaKnown RBP13.57□□□□□ -0.24
CRTC3-211ENST00000561119 RPS6KA4O75676 772 aa13.56□□□□□ -0.24
CRTC3-211ENST00000561119 ADRA2BP18089 450 aa13.56□□□□□ -0.24
CRTC3-211ENST00000561119 EPHX2P34913 555 aa13.56□□□□□ -0.24
CRTC3-211ENST00000561119 MAP2K2P36507 400 aa13.56□□□□□ -0.24
CRTC3-211ENST00000561119 SLC4A9Q96Q91 983 aa13.56□□□□□ -0.24
CRTC3-211ENST00000561119 ATG3Q9NT62 314 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms