RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 ECM29Q5VYK3 1845 aa7.13□□□□□ -1.27
ZEB1-219ENST00000560721 UBAP1LF5GYI3 381 aa7.13□□□□□ -1.27
ZEB1-219ENST00000560721 SMARCC1Q92922 1105 aaPredicted RBP7.13□□□□□ -1.27
ZEB1-219ENST00000560721 TRIM35Q9UPQ4 493 aa7.13□□□□□ -1.27
ZEB1-219ENST00000560721 SLFN5Q08AF3 891 aa7.13□□□□□ -1.27
ZEB1-219ENST00000560721 NUTM2DQ5VT03 806 aaPredicted RBP7.13□□□□□ -1.27
ZEB1-219ENST00000560721 ARXQ96QS3 562 aa7.13□□□□□ -1.27
ZEB1-219ENST00000560721 IFNL2Q8IZJ0 200 aa7.12□□□□□ -1.27
ZEB1-219ENST00000560721 GJD4Q96KN9 370 aaPredicted RBP7.12□□□□□ -1.27
ZEB1-219ENST00000560721 FOCADQ5VW36 1801 aa7.12□□□□□ -1.27
ZEB1-219ENST00000560721 TNRC6CQ9HCJ0 1690 aaKnown RBP7.12□□□□□ -1.27
ZEB1-219ENST00000560721 PTPRCP08575 1304 aa7.12□□□□□ -1.27
ZEB1-219ENST00000560721 TMPOP42166 694 aaKnown RBP7.12□□□□□ -1.27
ZEB1-219ENST00000560721 MSH5O43196 834 aa7.11□□□□□ -1.27
ZEB1-219ENST00000560721 HSPA1LP34931 641 aa7.11□□□□□ -1.27
ZEB1-219ENST00000560721 GNAI1P63096 354 aa7.11□□□□□ -1.27
ZEB1-219ENST00000560721 MYH14Q7Z406 1995 aaKnown RBP7.11□□□□□ -1.27
ZEB1-219ENST00000560721 TRIM28Q13263 835 aaKnown RBP7.11□□□□□ -1.27
ZEB1-219ENST00000560721 C14orf37Q86TY3 774 aa7.11□□□□□ -1.27
ZEB1-219ENST00000560721 NGLY1Q96IV0 654 aa7.11□□□□□ -1.27
ZEB1-219ENST00000560721 HNRNPUQ00839 825 aaKnown RBP eCLIP7.11□□□□□ -1.27
ZEB1-219ENST00000560721 LRP10Q7Z4F1 713 aa7.11□□□□□ -1.27
ZEB1-219ENST00000560721 BCL11BQ9C0K0 894 aaPredicted RBP7.11□□□□□ -1.27
ZEB1-219ENST00000560721 GNAT3A8MTJ3 354 aa7.1□□□□□ -1.27
ZEB1-219ENST00000560721 FOXO3O43524 673 aa7.1□□□□□ -1.27
ZEB1-219ENST00000560721 MS4A1P11836 297 aa7.1□□□□□ -1.27
ZEB1-219ENST00000560721 TATP17735 454 aaPredicted RBP7.1□□□□□ -1.27
ZEB1-219ENST00000560721 PPP4R2Q9NY27 417 aa7.1□□□□□ -1.27
ZEB1-219ENST00000560721 AXIN2Q9Y2T1 843 aa7.1□□□□□ -1.27
ZEB1-219ENST00000560721 RNMTO43148 476 aaKnown RBP7.09□□□□□ -1.27
ZEB1-219ENST00000560721 MYH16Q9H6N6 1097 aa7.09□□□□□ -1.27
ZEB1-219ENST00000560721 CCDC184Q52MB2 194 aa7.09□□□□□ -1.27
ZEB1-219ENST00000560721 NBPF6Q5VWK0 638 aa7.09□□□□□ -1.27
ZEB1-219ENST00000560721 NBPF4Q96M43 638 aa7.09□□□□□ -1.27
ZEB1-219ENST00000560721 CHMP4BQ9H444 224 aaKnown RBP7.09□□□□□ -1.27
ZEB1-219ENST00000560721 SLC52A2Q9HAB3 445 aa7.09□□□□□ -1.27
ZEB1-219ENST00000560721 C10orf71Q711Q0 1435 aa7.09□□□□□ -1.27
ZEB1-219ENST00000560721 COL11A2P13942 1736 aaPredicted RBP7.08□□□□□ -1.28
ZEB1-219ENST00000560721 ERVV-1B6SEH8 477 aa7.08□□□□□ -1.28
ZEB1-219ENST00000560721 MMP14P50281 582 aa7.08□□□□□ -1.28
ZEB1-219ENST00000560721 WWC1Q8IX03 1113 aa7.08□□□□□ -1.28
ZEB1-219ENST00000560721 GGNBP2Q9H3C7 697 aa7.08□□□□□ -1.28
ZEB1-219ENST00000560721 FER1L6Q2WGJ9 1857 aa7.08□□□□□ -1.28
ZEB1-219ENST00000560721 PAPPA2Q9BXP8 1791 aa7.08□□□□□ -1.28
ZEB1-219ENST00000560721 FBXO3Q9UK99 471 aa7.08□□□□□ -1.28
ZEB1-219ENST00000560721 SNED1Q8TER0 1413 aa7.08□□□□□ -1.28
ZEB1-219ENST00000560721 CARMIL3Q8ND23 1372 aa7.08□□□□□ -1.28
ZEB1-219ENST00000560721 GRIPAP1Q4V328 841 aa7.08□□□□□ -1.28
ZEB1-219ENST00000560721 FAM196AQ6ZSG2 479 aa7.08□□□□□ -1.28
ZEB1-219ENST00000560721 HOMEZQ8IX15 550 aa7.08□□□□□ -1.28
ZEB1-219ENST00000560721 ZCRB1Q8TBF4 217 aaKnown RBP7.08□□□□□ -1.28
ZEB1-219ENST00000560721 PLA2G12BQ9BX93 195 aa7.08□□□□□ -1.28
ZEB1-219ENST00000560721 EMILIN1Q9Y6C2 1016 aa7.08□□□□□ -1.28
ZEB1-219ENST00000560721 ABCC12Q96J65 1359 aa7.07□□□□□ -1.28
ZEB1-219ENST00000560721 FLAD1Q8NFF5 587 aa7.07□□□□□ -1.28
ZEB1-219ENST00000560721 ABCC4O15439 1325 aa7.07□□□□□ -1.28
ZEB1-219ENST00000560721 AFF2P51816 1311 aa7.07□□□□□ -1.28
ZEB1-219ENST00000560721 COL4A1P02462 1669 aa7.07□□□□□ -1.28
ZEB1-219ENST00000560721 PDE3AQ14432 1141 aa7.07□□□□□ -1.28
ZEB1-219ENST00000560721 DUSP27Q5VZP5 1158 aa7.07□□□□□ -1.28
ZEB1-219ENST00000560721 PMFBP1Q8TBY8 1022 aa7.07□□□□□ -1.28
ZEB1-219ENST00000560721 RGS17Q9UGC6 210 aaPredicted RBP7.07□□□□□ -1.28
ZEB1-219ENST00000560721 DDX60LQ5H9U9 1706 aaKnown RBP7.07□□□□□ -1.28
ZEB1-219ENST00000560721 TMC1Q8TDI8 760 aa7.06□□□□□ -1.28
ZEB1-219ENST00000560721 LAMA4Q16363 1823 aa7.06□□□□□ -1.28
ZEB1-219ENST00000560721 AMPHP49418 695 aa7.06□□□□□ -1.28
ZEB1-219ENST00000560721 TAF7Q15545 349 aaPredicted RBP7.06□□□□□ -1.28
ZEB1-219ENST00000560721 CDHR2Q9BYE9 1310 aa7.06□□□□□ -1.28
ZEB1-219ENST00000560721 A0A087WZG4 1122 aa7.06□□□□□ -1.28
ZEB1-219ENST00000560721 KLRG2A4D1S0 409 aaPredicted RBP7.06□□□□□ -1.28
ZEB1-219ENST00000560721 HSP90AB2PQ58FF8 381 aa7.06□□□□□ -1.28
ZEB1-219ENST00000560721 ADAMTS8Q9UP79 889 aa7.06□□□□□ -1.28
ZEB1-219ENST00000560721 WDR43Q15061 677 aaKnown RBP eCLIP7.05□□□□□ -1.28
ZEB1-219ENST00000560721 CLEC4GQ6UXB4 293 aa7.05□□□□□ -1.28
ZEB1-219ENST00000560721 VPS33BQ9H267 617 aa7.05□□□□□ -1.28
ZEB1-219ENST00000560721 PRDM11Q9NQV5 511 aa7.05□□□□□ -1.28
ZEB1-219ENST00000560721 ATG3Q9NT62 314 aa7.05□□□□□ -1.28
ZEB1-219ENST00000560721 MTX1Q13505 466 aa7.04□□□□□ -1.28
ZEB1-219ENST00000560721 MTHFSDQ2M296 383 aaKnown RBP7.04□□□□□ -1.28
ZEB1-219ENST00000560721 RFX7Q2KHR2 1363 aa7.04□□□□□ -1.28
ZEB1-219ENST00000560721 CYP27B1O15528 508 aa7.04□□□□□ -1.28
ZEB1-219ENST00000560721 EIF4A1P60842 406 aaKnown RBP7.04□□□□□ -1.28
ZEB1-219ENST00000560721 SLC16A10Q8TF71 515 aa7.04□□□□□ -1.28
ZEB1-219ENST00000560721 HDAC5Q9UQL6 1122 aa7.04□□□□□ -1.28
ZEB1-219ENST00000560721 PDS5AQ29RF7 1337 aaKnown RBP7.04□□□□□ -1.28
ZEB1-219ENST00000560721 GOLGA2Q08379 1002 aa7.03□□□□□ -1.28
ZEB1-219ENST00000560721 CCDC136Q96JN2 1154 aa7.03□□□□□ -1.28
ZEB1-219ENST00000560721 USP21Q9UK80 565 aa7.03□□□□□ -1.28
ZEB1-219ENST00000560721 ADAMTSL1Q8N6G6 1762 aa7.03□□□□□ -1.28
ZEB1-219ENST00000560721 MYH7P12883 1935 aa7.03□□□□□ -1.28
ZEB1-219ENST00000560721 INTS3Q68E01 1043 aaKnown RBP7.03□□□□□ -1.28
ZEB1-219ENST00000560721 AKT1S1Q96B36 256 aa7.03□□□□□ -1.28
ZEB1-219ENST00000560721 MRS2Q9HD23 443 aa7.03□□□□□ -1.28
ZEB1-219ENST00000560721 ZRANB1Q9UGI0 708 aa7.03□□□□□ -1.28
ZEB1-219ENST00000560721 IL6STP40189 918 aaPredicted RBP7.02□□□□□ -1.29
ZEB1-219ENST00000560721 RAPGEF4Q8WZA2 1011 aa7.02□□□□□ -1.29
ZEB1-219ENST00000560721 THSD7BQ9C0I4 1608 aa7.02□□□□□ -1.29
ZEB1-219ENST00000560721 MAPK8IP3Q9UPT6 1336 aa7.02□□□□□ -1.29
ZEB1-219ENST00000560721 ALDH1L1O75891 902 aa7.02□□□□□ -1.29
ZEB1-219ENST00000560721 SSFA2P28290 1259 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms