RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 API5Q9BZZ5 524 aaKnown RBP15.12■□□□□ 0.01
AC087878.1-201ENST00000560709 SLC52A2Q9HAB3 445 aa15.12■□□□□ 0.01
AC087878.1-201ENST00000560709 LGR6Q9HBX8 967 aa15.12■□□□□ 0.01
AC087878.1-201ENST00000560709 NRAPQ86VF7 1730 aa15.12■□□□□ 0.01
AC087878.1-201ENST00000560709 KDM6AO15550 1401 aaPredicted RBP15.11■□□□□ 0.01
AC087878.1-201ENST00000560709 CYP27B1O15528 508 aa15.11■□□□□ 0.01
AC087878.1-201ENST00000560709 ADAMTS2O95450 1211 aa15.11■□□□□ 0.01
AC087878.1-201ENST00000560709 CCDC30Q5VVM6 783 aa15.11■□□□□ 0.01
AC087878.1-201ENST00000560709 EXOC6Q8TAG9 804 aa15.11■□□□□ 0.01
AC087878.1-201ENST00000560709 PTPRCP08575 1304 aa15.11■□□□□ 0.01
AC087878.1-201ENST00000560709 KDM3BQ7LBC6 1761 aa15.11■□□□□ 0.01
AC087878.1-201ENST00000560709 ERVV-2B6SEH9 535 aa15.1■□□□□ 0.01
AC087878.1-201ENST00000560709 STK31Q9BXU1 1019 aa15.1■□□□□ 0.01
AC087878.1-201ENST00000560709 NOB1Q9ULX3 412 aaKnown RBP15.1■□□□□ 0.01
AC087878.1-201ENST00000560709 SCN11AQ9UI33 1791 aa15.1■□□□□ 0.01
AC087878.1-201ENST00000560709 NUTM2BA6NNL0 878 aaPredicted RBP15.09■□□□□ 0.01
AC087878.1-201ENST00000560709 NUTM2EB1AL46 878 aaPredicted RBP15.09■□□□□ 0.01
AC087878.1-201ENST00000560709 EIF4A1P60842 406 aaKnown RBP15.09■□□□□ 0.01
AC087878.1-201ENST00000560709 C20orf194Q5TEA3 1177 aa15.09■□□□□ 0.01
AC087878.1-201ENST00000560709 NUTM2AQ8IVF1 878 aaPredicted RBP15.09■□□□□ 0.01
AC087878.1-201ENST00000560709 SPATA31A1Q5TZJ5 1347 aa15.09■□□□□ 0.01
AC087878.1-201ENST00000560709 ELL2O00472 640 aaPredicted RBP15.08■□□□□ 0
AC087878.1-201ENST00000560709 TRIM27P14373 513 aa15.08■□□□□ 0
AC087878.1-201ENST00000560709 CACNB1Q02641 598 aaPredicted RBP15.08■□□□□ 0
AC087878.1-201ENST00000560709 MVPQ14764 893 aaKnown RBP15.08■□□□□ 0
AC087878.1-201ENST00000560709 BARGINQ6ZT62 677 aa15.08■□□□□ 0
AC087878.1-201ENST00000560709 MIS18AQ9NYP9 233 aa15.08■□□□□ 0
AC087878.1-201ENST00000560709 DDX19BQ9UMR2 479 aa15.08■□□□□ 0
AC087878.1-201ENST00000560709 SIPA1L3O60292 1781 aaPredicted RBP15.08■□□□□ 0
AC087878.1-201ENST00000560709 TNS2Q63HR2 1409 aa15.08■□□□□ 0
AC087878.1-201ENST00000560709 UNC5CLQ8IV45 518 aa15.07■□□□□ 0
AC087878.1-201ENST00000560709 SPATA31A5Q5VU36 1347 aa15.07■□□□□ 0
AC087878.1-201ENST00000560709 SPATA31A7Q8IWB4 1347 aa15.07■□□□□ 0
AC087878.1-201ENST00000560709 HEG1Q9ULI3 1381 aa15.07■□□□□ 0
AC087878.1-201ENST00000560709 LRP6O75581 1613 aa15.06■□□□□ 0
AC087878.1-201ENST00000560709 WNK3Q9BYP7 1800 aa15.06■□□□□ 0
AC087878.1-201ENST00000560709 CABP4P57796 275 aa15.06■□□□□ 0
AC087878.1-201ENST00000560709 TTC5Q8N0Z6 440 aa15.06■□□□□ 0
AC087878.1-201ENST00000560709 FNBP4Q8N3X1 1017 aaPredicted RBP15.06■□□□□ 0
AC087878.1-201ENST00000560709 EXOC5O00471 708 aa15.05■□□□□ -0
AC087878.1-201ENST00000560709 VPS72Q15906 364 aa15.05■□□□□ -0
AC087878.1-201ENST00000560709 B4GALNT3Q6L9W6 998 aa15.05■□□□□ -0
AC087878.1-201ENST00000560709 ZNF790Q6PG37 636 aa15.05■□□□□ -0
AC087878.1-201ENST00000560709 NGLY1Q96IV0 654 aa15.05■□□□□ -0
AC087878.1-201ENST00000560709 USP35Q9P2H5 1018 aa15.05■□□□□ -0
AC087878.1-201ENST00000560709 ABCC4O15439 1325 aa15.05■□□□□ -0
AC087878.1-201ENST00000560709 VIRMAQ69YN4 1812 aaKnown RBP15.05■□□□□ -0
AC087878.1-201ENST00000560709 SHANK3Q9BYB0 1731 aa15.04■□□□□ -0
AC087878.1-201ENST00000560709 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.04■□□□□ -0
AC087878.1-201ENST00000560709 KRT24Q2M2I5 525 aa15.04■□□□□ -0
AC087878.1-201ENST00000560709 HDGFL1Q5TGJ6 251 aa15.04■□□□□ -0
AC087878.1-201ENST00000560709 PANK1Q8TE04 598 aa15.04■□□□□ -0
AC087878.1-201ENST00000560709 CLUAP1Q96AJ1 413 aa15.04■□□□□ -0
AC087878.1-201ENST00000560709 COG6Q9Y2V7 657 aa15.04■□□□□ -0
AC087878.1-201ENST00000560709 SLC4A2P04920 1241 aa15.03■□□□□ -0
AC087878.1-201ENST00000560709 HSPA1LP34931 641 aa15.03■□□□□ -0
AC087878.1-201ENST00000560709 NFATC2IPQ8NCF5 419 aa15.03■□□□□ -0
AC087878.1-201ENST00000560709 C8orf37Q96NL8 207 aa15.03■□□□□ -0
AC087878.1-201ENST00000560709 CACNA1FO60840 1977 aa15.02■□□□□ -0
AC087878.1-201ENST00000560709 GIGYF1O75420 1035 aaPredicted RBP15.02■□□□□ -0
AC087878.1-201ENST00000560709 RLBP1P12271 317 aa15.02■□□□□ -0
AC087878.1-201ENST00000560709 ITPRIPQ8IWB1 547 aa15.02■□□□□ -0
AC087878.1-201ENST00000560709 DDX54Q8TDD1 881 aaKnown RBP15.02■□□□□ -0
AC087878.1-201ENST00000560709 FMNL2Q96PY5 1086 aa15.02■□□□□ -0
AC087878.1-201ENST00000560709 BCL9LQ86UU0 1499 aa15.01□□□□□ -0.01
AC087878.1-201ENST00000560709 DDB1Q16531 1140 aa15.01□□□□□ -0.01
AC087878.1-201ENST00000560709 MEX3CQ5U5Q3 659 aaKnown RBP15.01□□□□□ -0.01
AC087878.1-201ENST00000560709 DBF4Q9UBU7 674 aaPredicted RBP15.01□□□□□ -0.01
AC087878.1-201ENST00000560709 ERBB4Q15303 1308 aa15□□□□□ -0.01
AC087878.1-201ENST00000560709 SNRPA1P09661 255 aaKnown RBP15□□□□□ -0.01
AC087878.1-201ENST00000560709 CENPQQ7L2Z9 268 aaPredicted RBP15□□□□□ -0.01
AC087878.1-201ENST00000560709 TMEM57Q8N5G2 664 aa15□□□□□ -0.01
AC087878.1-201ENST00000560709 CCDC9Q9Y3X0 531 aaKnown RBP15□□□□□ -0.01
AC087878.1-201ENST00000560709 PXDNLA1KZ92 1463 aa15□□□□□ -0.01
AC087878.1-201ENST00000560709 CCT4P50991 539 aaKnown RBP14.99□□□□□ -0.01
AC087878.1-201ENST00000560709 FLIIQ13045 1269 aa14.99□□□□□ -0.01
AC087878.1-201ENST00000560709 INTS3Q68E01 1043 aaKnown RBP14.99□□□□□ -0.01
AC087878.1-201ENST00000560709 TMOD3Q9NYL9 352 aa14.99□□□□□ -0.01
AC087878.1-201ENST00000560709 USP21Q9UK80 565 aa14.99□□□□□ -0.01
AC087878.1-201ENST00000560709 RGS12O14924 1447 aa14.99□□□□□ -0.01
AC087878.1-201ENST00000560709 KCNQ3O43525 872 aa14.98□□□□□ -0.01
AC087878.1-201ENST00000560709 HYPKQ9NX55 129 aa14.98□□□□□ -0.01
AC087878.1-201ENST00000560709 PAPPAQ13219 1627 aa14.98□□□□□ -0.01
AC087878.1-201ENST00000560709 TCERG1O14776 1098 aaKnown RBP14.97□□□□□ -0.01
AC087878.1-201ENST00000560709 EIF2S2P20042 333 aaKnown RBP14.96□□□□□ -0.01
AC087878.1-201ENST00000560709 FKBP5Q13451 457 aaPredicted RBP14.96□□□□□ -0.01
AC087878.1-201ENST00000560709 VSIG10Q8N0Z9 540 aa14.96□□□□□ -0.01
AC087878.1-201ENST00000560709 ZNF496Q96IT1 587 aaPredicted RBP14.96□□□□□ -0.01
AC087878.1-201ENST00000560709 TEX13AQ9BXU3 409 aaPredicted RBP14.96□□□□□ -0.01
AC087878.1-201ENST00000560709 DDX21Q9NR30 783 aaKnown RBP eCLIP14.96□□□□□ -0.01
AC087878.1-201ENST00000560709 TNNQ9UQP3 1299 aa14.96□□□□□ -0.01
AC087878.1-201ENST00000560709 KDM2BQ8NHM5 1336 aa14.95□□□□□ -0.02
AC087878.1-201ENST00000560709 DDX58O95786 925 aaKnown RBP14.95□□□□□ -0.02
AC087878.1-201ENST00000560709 SLC39A6Q13433 755 aa14.95□□□□□ -0.02
AC087878.1-201ENST00000560709 RWDD1Q9H446 243 aaPredicted RBP14.95□□□□□ -0.02
AC087878.1-201ENST00000560709 ZBTB40Q9NUA8 1239 aa14.95□□□□□ -0.02
AC087878.1-201ENST00000560709 TRPC5Q9UL62 973 aaPredicted RBP14.95□□□□□ -0.02
AC087878.1-201ENST00000560709 UBR2Q8IWV8 1755 aa14.95□□□□□ -0.02
AC087878.1-201ENST00000560709 BCL9O00512 1426 aa14.94□□□□□ -0.02
AC087878.1-201ENST00000560709 CHPF2Q9P2E5 772 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms