RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 GNAT3A8MTJ3 354 aa14.78□□□□□ -0.04
SYNM-203ENST00000560674 IDH1O75874 414 aaKnown RBP14.78□□□□□ -0.04
SYNM-203ENST00000560674 EZRP15311 586 aaKnown RBP14.78□□□□□ -0.04
SYNM-203ENST00000560674 RARSP54136 660 aaKnown RBP14.78□□□□□ -0.04
SYNM-203ENST00000560674 LRP2BPQ9P2M1 347 aa14.77□□□□□ -0.04
SYNM-203ENST00000560674 PRXQ9BXM0 1461 aa14.77□□□□□ -0.04
SYNM-203ENST00000560674 NKTRP30414 1462 aaKnown RBP14.77□□□□□ -0.04
SYNM-203ENST00000560674 SMARCA5O60264 1052 aaPredicted RBP14.77□□□□□ -0.04
SYNM-203ENST00000560674 DUSP27Q5VZP5 1158 aa14.77□□□□□ -0.04
SYNM-203ENST00000560674 PEG3Q9GZU2 1588 aa14.77□□□□□ -0.05
SYNM-203ENST00000560674 TROQ12816 1431 aaPredicted RBP14.77□□□□□ -0.05
SYNM-203ENST00000560674 HECW1Q76N89 1606 aa14.77□□□□□ -0.05
SYNM-203ENST00000560674 GBP2P32456 591 aaPredicted RBP14.76□□□□□ -0.05
SYNM-203ENST00000560674 KIF5CO60282 957 aa14.76□□□□□ -0.05
SYNM-203ENST00000560674 SPA17Q15506 151 aa14.76□□□□□ -0.05
SYNM-203ENST00000560674 ABCC11Q96J66 1382 aa14.76□□□□□ -0.05
SYNM-203ENST00000560674 SSH1Q8WYL5 1049 aa14.76□□□□□ -0.05
SYNM-203ENST00000560674 SSFA2P28290 1259 aa14.76□□□□□ -0.05
SYNM-203ENST00000560674 CASQ1P31415 396 aa14.76□□□□□ -0.05
SYNM-203ENST00000560674 PIBF1Q8WXW3 757 aa14.76□□□□□ -0.05
SYNM-203ENST00000560674 CLIP2Q9UDT6 1046 aa14.76□□□□□ -0.05
SYNM-203ENST00000560674 PRG4Q92954 1404 aaPredicted RBP14.75□□□□□ -0.05
SYNM-203ENST00000560674 C20orf194Q5TEA3 1177 aa14.75□□□□□ -0.05
SYNM-203ENST00000560674 THEMISQ8N1K5 641 aaPredicted RBP14.75□□□□□ -0.05
SYNM-203ENST00000560674 MAP9Q49MG5 647 aa14.75□□□□□ -0.05
SYNM-203ENST00000560674 SPINK5Q9NQ38 1064 aaPredicted RBP14.75□□□□□ -0.05
SYNM-203ENST00000560674 TOP1P11387 765 aaKnown RBP14.75□□□□□ -0.05
SYNM-203ENST00000560674 TNPO1Q92973 898 aaKnown RBP14.75□□□□□ -0.05
SYNM-203ENST00000560674 INCENPQ9NQS7 918 aa14.75□□□□□ -0.05
SYNM-203ENST00000560674 SHTN1A0MZ66 631 aa14.74□□□□□ -0.05
SYNM-203ENST00000560674 TBC1D2Q9BYX2 928 aa14.74□□□□□ -0.05
SYNM-203ENST00000560674 CTAGE5O15320 804 aa14.74□□□□□ -0.05
SYNM-203ENST00000560674 URI1O94763 535 aaPredicted RBP14.74□□□□□ -0.05
SYNM-203ENST00000560674 ZNF76P36508 570 aa14.74□□□□□ -0.05
SYNM-203ENST00000560674 SUPT6HQ7KZ85 1726 aaKnown RBP14.74□□□□□ -0.05
SYNM-203ENST00000560674 IGHMBP2P38935 993 aaKnown RBP14.74□□□□□ -0.05
SYNM-203ENST00000560674 THUMPD2Q9BTF0 503 aaKnown RBP14.74□□□□□ -0.05
SYNM-203ENST00000560674 AKAP2Q9Y2D5 859 aa14.74□□□□□ -0.05
SYNM-203ENST00000560674 XPCQ01831 940 aaPredicted RBP14.74□□□□□ -0.05
SYNM-203ENST00000560674 CGNQ9P2M7 1197 aaKnown RBP14.74□□□□□ -0.05
SYNM-203ENST00000560674 MCM3P25205 808 aa14.73□□□□□ -0.05
SYNM-203ENST00000560674 C8orf76Q96K31 380 aa14.73□□□□□ -0.05
SYNM-203ENST00000560674 MIS18AQ9NYP9 233 aa14.73□□□□□ -0.05
SYNM-203ENST00000560674 HMGB1P09429 215 aaKnown RBP14.73□□□□□ -0.05
SYNM-203ENST00000560674 RBM5P52756 815 aaKnown RBP eCLIP14.73□□□□□ -0.05
SYNM-203ENST00000560674 CBX1P83916 185 aa14.73□□□□□ -0.05
SYNM-203ENST00000560674 KIF4BQ2VIQ3 1234 aa14.73□□□□□ -0.05
SYNM-203ENST00000560674 FKBP15Q5T1M5 1219 aa14.73□□□□□ -0.05
SYNM-203ENST00000560674 MCM10Q7L590 875 aa14.73□□□□□ -0.05
SYNM-203ENST00000560674 LIMCH1Q9UPQ0 1083 aa14.73□□□□□ -0.05
SYNM-203ENST00000560674 PPP1R12BO60237 982 aaPredicted RBP14.73□□□□□ -0.05
SYNM-203ENST00000560674 DHX37Q8IY37 1157 aaKnown RBP14.73□□□□□ -0.05
SYNM-203ENST00000560674 DESP17661 470 aa14.73□□□□□ -0.05
SYNM-203ENST00000560674 METTL24Q5JXM2 366 aa14.73□□□□□ -0.05
SYNM-203ENST00000560674 BOLA2Q9H3K6 86 aa14.73□□□□□ -0.05
SYNM-203ENST00000560674 BICRAQ9NZM4 1560 aa14.73□□□□□ -0.05
SYNM-203ENST00000560674 KLHL10Q6JEL2 608 aa14.72□□□□□ -0.05
SYNM-203ENST00000560674 USP25Q9UHP3 1055 aa14.72□□□□□ -0.05
SYNM-203ENST00000560674 USP5P45974 858 aa14.72□□□□□ -0.05
SYNM-203ENST00000560674 CCDC85AQ96PX6 553 aaPredicted RBP14.72□□□□□ -0.05
SYNM-203ENST00000560674 CCDC196A0A1B0GTZ2 297 aa14.72□□□□□ -0.05
SYNM-203ENST00000560674 NEMFO60524 1076 aa14.72□□□□□ -0.05
SYNM-203ENST00000560674 PHAXQ9H814 394 aaKnown RBP14.72□□□□□ -0.05
SYNM-203ENST00000560674 SKAP1Q86WV1 359 aa14.72□□□□□ -0.05
SYNM-203ENST00000560674 TNNT1P13805 278 aa14.71□□□□□ -0.05
SYNM-203ENST00000560674 ZSCAN29Q8IWY8 852 aaPredicted RBP14.71□□□□□ -0.05
SYNM-203ENST00000560674 LRPPRCP42704 1394 aaKnown RBP14.71□□□□□ -0.05
SYNM-203ENST00000560674 LARP1Q6PKG0 1096 aaKnown RBP14.71□□□□□ -0.05
SYNM-203ENST00000560674 DDX19AQ9NUU7 478 aaKnown RBP14.71□□□□□ -0.05
SYNM-203ENST00000560674 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.71□□□□□ -0.05
SYNM-203ENST00000560674 ABCF2Q9UG63 623 aa14.71□□□□□ -0.05
SYNM-203ENST00000560674 SSR1P43307 286 aaKnown RBP14.71□□□□□ -0.06
SYNM-203ENST00000560674 TSG101Q99816 390 aa14.71□□□□□ -0.06
SYNM-203ENST00000560674 IFIT1P09914 478 aaKnown RBP14.7□□□□□ -0.06
SYNM-203ENST00000560674 NUDT16Q96DE0 195 aaKnown RBP14.7□□□□□ -0.06
SYNM-203ENST00000560674 CETN2P41208 172 aa14.7□□□□□ -0.06
SYNM-203ENST00000560674 POTEJP0CG39 1038 aa14.7□□□□□ -0.06
SYNM-203ENST00000560674 CKAP2LQ8IYA6 745 aa14.7□□□□□ -0.06
SYNM-203ENST00000560674 SEC63Q9UGP8 760 aaKnown RBP14.7□□□□□ -0.06
SYNM-203ENST00000560674 MATR3P43243 847 aaKnown RBP eCLIP14.7□□□□□ -0.06
SYNM-203ENST00000560674 CACNA2D4Q7Z3S7 1137 aa14.7□□□□□ -0.06
SYNM-203ENST00000560674 SLC26A8Q96RN1 970 aa14.7□□□□□ -0.06
SYNM-203ENST00000560674 ZNF287Q9HBT7 754 aa14.7□□□□□ -0.06
SYNM-203ENST00000560674 DYDC1Q8WWB3 177 aa14.7□□□□□ -0.06
SYNM-203ENST00000560674 CCDC61Q9Y6R9 512 aa14.7□□□□□ -0.06
SYNM-203ENST00000560674 PRDM11Q9NQV5 511 aa14.69□□□□□ -0.06
SYNM-203ENST00000560674 PRDM10Q9NQV6 1147 aa14.69□□□□□ -0.06
SYNM-203ENST00000560674 GSDMDP57764 484 aa14.69□□□□□ -0.06
SYNM-203ENST00000560674 NAPBQ9H115 298 aa14.69□□□□□ -0.06
SYNM-203ENST00000560674 GUCY1B3Q02153 619 aa14.69□□□□□ -0.06
SYNM-203ENST00000560674 MAP2K1Q02750 393 aaPredicted RBP14.69□□□□□ -0.06
SYNM-203ENST00000560674 MCM5P33992 734 aa14.69□□□□□ -0.06
SYNM-203ENST00000560674 VPS36Q86VN1 386 aa14.68□□□□□ -0.06
SYNM-203ENST00000560674 C16orf45Q96MC5 204 aaPredicted RBP14.68□□□□□ -0.06
SYNM-203ENST00000560674 NAIPQ13075 1403 aa14.68□□□□□ -0.06
SYNM-203ENST00000560674 LUZP1Q86V48 1076 aa14.68□□□□□ -0.06
SYNM-203ENST00000560674 STARD3NLO95772 234 aa14.68□□□□□ -0.06
SYNM-203ENST00000560674 MINDY4BA8MYZ0 360 aa14.68□□□□□ -0.06
SYNM-203ENST00000560674 TAF7Q15545 349 aaPredicted RBP14.68□□□□□ -0.06
SYNM-203ENST00000560674 FSIP1Q8NA03 581 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms