RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 CGNQ9P2M7 1197 aaKnown RBP19.34■□□□□ 0.69
PBX1-219ENST00000560641 ATP7BP35670 1465 aa19.34■□□□□ 0.69
PBX1-219ENST00000560641 CRYBG1Q9Y4K1 1723 aa19.34■□□□□ 0.69
PBX1-219ENST00000560641 PTPRCP08575 1304 aa19.34■□□□□ 0.69
PBX1-219ENST00000560641 SMTNL1A8MU46 457 aa19.34■□□□□ 0.69
PBX1-219ENST00000560641 U2AF2P26368 475 aaKnown RBP eCLIP19.34■□□□□ 0.69
PBX1-219ENST00000560641 PRKAR2BP31323 418 aa19.34■□□□□ 0.69
PBX1-219ENST00000560641 BBXQ8WY36 941 aaPredicted RBP19.33■□□□□ 0.69
PBX1-219ENST00000560641 GGNBP2Q9H3C7 697 aa19.33■□□□□ 0.68
PBX1-219ENST00000560641 PYCARDQ9ULZ3 195 aa19.32■□□□□ 0.68
PBX1-219ENST00000560641 SLFN14P0C7P3 912 aa19.32■□□□□ 0.68
PBX1-219ENST00000560641 PDE1AP54750 535 aa19.32■□□□□ 0.68
PBX1-219ENST00000560641 CHD2O14647 1828 aaKnown RBP19.31■□□□□ 0.68
PBX1-219ENST00000560641 HCLS1P14317 486 aaPredicted RBP19.31■□□□□ 0.68
PBX1-219ENST00000560641 C17orf53Q8N3J3 647 aaPredicted RBP19.31■□□□□ 0.68
PBX1-219ENST00000560641 CABP2Q9NPB3 220 aa19.31■□□□□ 0.68
PBX1-219ENST00000560641 SRCIN1Q9C0H9 1055 aa19.31■□□□□ 0.68
PBX1-219ENST00000560641 TMEM132EQ6IEE7 984 aa19.3■□□□□ 0.68
PBX1-219ENST00000560641 PAXBP1Q9Y5B6 917 aa19.3■□□□□ 0.68
PBX1-219ENST00000560641 AOX1Q06278 1338 aa19.3■□□□□ 0.68
PBX1-219ENST00000560641 AP5Z1O43299 807 aa19.3■□□□□ 0.68
PBX1-219ENST00000560641 C8orf58Q8NAV2 365 aa19.3■□□□□ 0.68
PBX1-219ENST00000560641 MSH6P52701 1360 aa19.29■□□□□ 0.68
PBX1-219ENST00000560641 SPDYE4A6NLX3 237 aa19.29■□□□□ 0.68
PBX1-219ENST00000560641 AATKQ6ZMQ8 1374 aa19.29■□□□□ 0.68
PBX1-219ENST00000560641 YTHDC2Q9H6S0 1430 aaKnown RBP19.29■□□□□ 0.68
PBX1-219ENST00000560641 ZSCAN22P10073 491 aaPredicted RBP19.29■□□□□ 0.68
PBX1-219ENST00000560641 SMARCA5O60264 1052 aaPredicted RBP19.28■□□□□ 0.68
PBX1-219ENST00000560641 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.28■□□□□ 0.68
PBX1-219ENST00000560641 VGFO15240 615 aaPredicted RBP19.28■□□□□ 0.68
PBX1-219ENST00000560641 HMMRO75330 724 aa19.28■□□□□ 0.68
PBX1-219ENST00000560641 PHACTR3Q96KR7 559 aa19.28■□□□□ 0.68
PBX1-219ENST00000560641 STAP2Q9UGK3 403 aa19.28■□□□□ 0.68
PBX1-219ENST00000560641 ATP6V1DQ9Y5K8 247 aa19.28■□□□□ 0.68
PBX1-219ENST00000560641 PALD1Q9ULE6 856 aa19.27■□□□□ 0.68
PBX1-219ENST00000560641 ARHGEF10O15013 1369 aa19.27■□□□□ 0.68
PBX1-219ENST00000560641 SETD1AO15047 1707 aaKnown RBP19.27■□□□□ 0.67
PBX1-219ENST00000560641 CCDC66A2RUB6 948 aa19.26■□□□□ 0.67
PBX1-219ENST00000560641 POLKQ9UBT6 870 aa19.26■□□□□ 0.67
PBX1-219ENST00000560641 CHMLP26374 656 aa19.25■□□□□ 0.67
PBX1-219ENST00000560641 IL13P35225 146 aa19.25■□□□□ 0.67
PBX1-219ENST00000560641 SLFNL1Q499Z3 407 aa19.25■□□□□ 0.67
PBX1-219ENST00000560641 KIF18AQ8NI77 898 aa19.25■□□□□ 0.67
PBX1-219ENST00000560641 DLC1Q96QB1 1528 aa19.25■□□□□ 0.67
PBX1-219ENST00000560641 CCDC171Q6TFL3 1326 aa19.25■□□□□ 0.67
PBX1-219ENST00000560641 FAM177BA6PVY3 158 aa19.25■□□□□ 0.67
PBX1-219ENST00000560641 HSPA4P34932 840 aa19.25■□□□□ 0.67
PBX1-219ENST00000560641 TERF2Q15554 542 aa19.25■□□□□ 0.67
PBX1-219ENST00000560641 PDIA4P13667 645 aaKnown RBP19.25■□□□□ 0.67
PBX1-219ENST00000560641 PDE4CQ08493 712 aa19.25■□□□□ 0.67
PBX1-219ENST00000560641 FOXD4L5Q5VV16 416 aaPredicted RBP19.24■□□□□ 0.67
PBX1-219ENST00000560641 IPO4Q8TEX9 1081 aaKnown RBP19.24■□□□□ 0.67
PBX1-219ENST00000560641 FOXD4L4Q8WXT5 416 aaPredicted RBP19.24■□□□□ 0.67
PBX1-219ENST00000560641 TTC14Q96N46 770 aa19.24■□□□□ 0.67
PBX1-219ENST00000560641 XRN1Q8IZH2 1706 aaKnown RBP19.24■□□□□ 0.67
PBX1-219ENST00000560641 F13A1P00488 732 aa19.23■□□□□ 0.67
PBX1-219ENST00000560641 ZNF771Q7L3S4 317 aaPredicted RBP19.23■□□□□ 0.67
PBX1-219ENST00000560641 FAM200AQ8TCP9 573 aa19.23■□□□□ 0.67
PBX1-219ENST00000560641 KCND1Q9NSA2 647 aa19.23■□□□□ 0.67
PBX1-219ENST00000560641 CNPY2Q9Y2B0 182 aa19.23■□□□□ 0.67
PBX1-219ENST00000560641 MLH3Q9UHC1 1453 aa19.23■□□□□ 0.67
PBX1-219ENST00000560641 HDGFL2Q7Z4V5 671 aaPredicted RBP19.23■□□□□ 0.67
PBX1-219ENST00000560641 GDPD2Q9HCC8 539 aa19.23■□□□□ 0.67
PBX1-219ENST00000560641 MON2Q7Z3U7 1717 aa19.22■□□□□ 0.67
PBX1-219ENST00000560641 TULP2O00295 520 aa19.22■□□□□ 0.67
PBX1-219ENST00000560641 CCDC192P0DO97 292 aa19.22■□□□□ 0.67
PBX1-219ENST00000560641 ADGRL3Q9HAR2 1447 aa19.22■□□□□ 0.67
PBX1-219ENST00000560641 CDC25BP30305 580 aa19.22■□□□□ 0.67
PBX1-219ENST00000560641 STX6O43752 255 aa19.21■□□□□ 0.67
PBX1-219ENST00000560641 RBM43Q6ZSC3 357 aaKnown RBP19.21■□□□□ 0.67
PBX1-219ENST00000560641 PLA2G4DQ86XP0 818 aa19.21■□□□□ 0.67
PBX1-219ENST00000560641 ELP1O95163 1332 aa19.21■□□□□ 0.67
PBX1-219ENST00000560641 KRT222Q8N1A0 295 aa19.21■□□□□ 0.67
PBX1-219ENST00000560641 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.21■□□□□ 0.67
PBX1-219ENST00000560641 RGPD1P0DJD0 1748 aa19.2■□□□□ 0.66
PBX1-219ENST00000560641 TMEM131LA2VDJ0 1609 aa19.2■□□□□ 0.66
PBX1-219ENST00000560641 ZNF397Q8NF99 534 aaPredicted RBP19.2■□□□□ 0.66
PBX1-219ENST00000560641 THUMPD2Q9BTF0 503 aaKnown RBP19.2■□□□□ 0.66
PBX1-219ENST00000560641 CACNA1FO60840 1977 aa19.19■□□□□ 0.66
PBX1-219ENST00000560641 MYO5BQ9ULV0 1848 aa19.19■□□□□ 0.66
PBX1-219ENST00000560641 MEIS3Q99687 375 aa19.18■□□□□ 0.66
PBX1-219ENST00000560641 FAM208AQ9UK61 1670 aaKnown RBP19.18■□□□□ 0.66
PBX1-219ENST00000560641 SYT1P21579 422 aa19.18■□□□□ 0.66
PBX1-219ENST00000560641 CHL1O00533 1208 aa19.17■□□□□ 0.66
PBX1-219ENST00000560641 EDC4Q6P2E9 1401 aaKnown RBP19.17■□□□□ 0.66
PBX1-219ENST00000560641 SRPK2P78362 688 aaKnown RBP19.17■□□□□ 0.66
PBX1-219ENST00000560641 AEBP1Q8IUX7 1158 aa19.17■□□□□ 0.66
PBX1-219ENST00000560641 CFAP65Q6ZU64 1925 aaKnown RBP19.17■□□□□ 0.66
PBX1-219ENST00000560641 GIMAP6Q6P9H5 292 aa19.17■□□□□ 0.66
PBX1-219ENST00000560641 MPNDQ8N594 471 aa19.17■□□□□ 0.66
PBX1-219ENST00000560641 RAD50Q92878 1312 aa19.17■□□□□ 0.66
PBX1-219ENST00000560641 C3P01024 1663 aa19.16■□□□□ 0.66
PBX1-219ENST00000560641 AKAP12Q02952 1782 aa19.16■□□□□ 0.66
PBX1-219ENST00000560641 CCT4P50991 539 aaKnown RBP19.16■□□□□ 0.66
PBX1-219ENST00000560641 RBM6P78332 1123 aaKnown RBP19.16■□□□□ 0.66
PBX1-219ENST00000560641 IRX5P78411 483 aaPredicted RBP19.16■□□□□ 0.66
PBX1-219ENST00000560641 TDRD7Q8NHU6 1098 aaKnown RBP19.16■□□□□ 0.66
PBX1-219ENST00000560641 PXDNLA1KZ92 1463 aa19.16■□□□□ 0.66
PBX1-219ENST00000560641 PTGS1P23219 599 aa19.16■□□□□ 0.66
PBX1-219ENST00000560641 CCDC112Q8NEF3 446 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms